FC919321
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC919321 vs. ExPASy Swiss-Prot
Match: NCED3_ARATH (9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic OS=Arabidopsis thaliana GN=NCED3 PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 6.805e-59 Identity = 106/133 (79.70%), Postives = 117/133 (87.97%), Query Frame = -3 Query: 1 GELKTVGRXDFSGQLKSTMIAHPKVDPVTGDLFAQSYDVVKKPYLKYFQFSPQGIKSPDVXIPLEEPTMMHDFAITENFVVVPDQQVVFKXKEMIRGGSPVIYDKNKVSRFGILDKNATDASKMKWXXAPDCF 399 G+LKTVGR DF GQL+STMIAHPKVDP +G+LFA SYDVV KPYLKYF+FSP G KSPDV I L++PTMMHDFAITENFVVVPDQQVVFK EMIRGGSPV+YDKNKV+RFGILDK A D+S +KW APDCF Sbjct: 276 GDLKTVGRFDFDGQLESTMIAHPKVDPESGELFALSYDVVSKPYLKYFRFSPDGTKSPDVEIQLDQPTMMHDFAITENFVVVPDQQVVFKLPEMIRGGSPVVYDKNKVARFGILDKYAEDSSNIKWIDAPDCF 408 HSP 2 Score: 25.7942 bits (55), Expect = 6.805e-59 Identity = 13/29 (44.83%), Postives = 15/29 (51.72%), Query Frame = -1 Query: 396 NAVFXYFNNCLLAMXXXXXXXXVGVTPSG 482 NA YFN LLAM V +TP+G Sbjct: 248 NAGLVYFNGRLLAMSEDDLPYQVQITPNG 276
BLAST of FC919321 vs. ExPASy Swiss-Prot
Match: NCED1_PHAVU (9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic OS=Phaseolus vulgaris GN=NCED1 PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.966e-58 Identity = 106/135 (78.52%), Postives = 117/135 (86.67%), Query Frame = -3 Query: 1 SIGELKTVGRXDFSGQLKSTMIAHPKVDPVTGDLFAQSYDVVKKPYLKYFQFSPQGIKSPDVXIPLEEPTMMHDFAITENFVVVPDQQVVFKXKEMIRGGSPVIYDKNKVSRFGILDKNATDASKMKWXXAPDCF 405 S G+L TVGR DF+GQL STMIAHPK+DPV GDL A SYDVV+KPYLKYF+FS G+KSPDV IPL+EPTMMHDFAITENFVVVPDQQVVFK EMI GGSPV+YDKNK SRFGILDKNA DA+ M+W AP+CF Sbjct: 293 SNGDLTTVGRYDFNGQLNSTMIAHPKLDPVNGDLHALSYDVVQKPYLKYFRFSADGVKSPDVEIPLKEPTMMHDFAITENFVVVPDQQVVFKLTEMITGGSPVVYDKNKTSRFGILDKNAKDANAMRWIDAPECF 427 HSP 2 Score: 25.0238 bits (53), Expect = 1.966e-58 Identity = 13/29 (44.83%), Postives = 15/29 (51.72%), Query Frame = -1 Query: 396 NAVFXYFNNCLLAMXXXXXXXXVGVTPSG 482 NA YFNN LLAM V +T +G Sbjct: 267 NAGLVYFNNHLLAMSEDDLPYHVRITSNG 295
BLAST of FC919321 vs. ExPASy Swiss-Prot
Match: NCED9_ARATH (9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic OS=Arabidopsis thaliana GN=NCED9 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 1.039e-53 Identity = 97/133 (72.93%), Postives = 113/133 (84.96%), Query Frame = -3 Query: 1 GELKTVGRXDFSGQLKSTMIAHPKVDPVTGDLFAQSYDVVKKPYLKYFQFSPQGIKSPDVXIPLEEPTMMHDFAITENFVVVPDQQVVFKXKEMIRGGSPVIYDKNKVSRFGILDKNATDASKMKWXXAPDCF 399 G+L+T GR DF GQLKSTMIAHPK+DP T +LFA SYDVV KPYLKYF+F+ G KSPDV IPL++PTM+HDFAITENFVV+PDQQVVF+ EMIRGGSPV+YD+ K SRFGIL+KNA DAS ++W PDCF Sbjct: 336 GDLETSGRYDFDGQLKSTMIAHPKIDPETRELFALSYDVVSKPYLKYFRFTSDGEKSPDVEIPLDQPTMIHDFAITENFVVIPDQQVVFRLPEMIRGGSPVVYDEKKKSRFGILNKNAKDASSIQWIEVPDCF 468
BLAST of FC919321 vs. ExPASy Swiss-Prot
Match: NCED5_ARATH (Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic OS=Arabidopsis thaliana GN=NCED5 PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 2.165e-51 Identity = 95/133 (71.43%), Postives = 109/133 (81.95%), Query Frame = -3 Query: 1 GELKTVGRXDFSGQLKSTMIAHPKVDPVTGDLFAQSYDVVKKPYLKYFQFSPQGIKSPDVXIPLEEPTMMHDFAITENFVVVPDQQVVFKXKEMIRGGSPVIYDKNKVSRFGILDKNATDASKMKWXXAPDCF 399 G+L+T+GR DF GQL S MIAHPK+DPVT +LFA SYDVVKKPYLKYF+FSP+G KSPDV IPL PTMMHDFAITENFVV+PDQQVVFK +M G SPV YD K+SRFGIL +NA DAS+M W +P+ F Sbjct: 266 GDLETIGRFDFDGQLSSAMIAHPKIDPVTKELFALSYDVVKKPYLKYFKFSPEGEKSPDVEIPLASPTMMHDFAITENFVVIPDQQVVFKLSDMFLGKSPVKYDGEKISRFGILPRNAKDASEMVWVESPETF 398
BLAST of FC919321 vs. ExPASy Swiss-Prot
Match: NCED1_MAIZE (9-cis-epoxycarotenoid dioxygenase 1, chloroplastic OS=Zea mays GN=VP14 PE=1 SV=2) HSP 1 Score: 200.675 bits (509), Expect = 2.828e-51 Identity = 93/133 (69.92%), Postives = 107/133 (80.45%), Query Frame = -3 Query: 1 GELKTVGRXDFSGQLKSTMIAHPKVDPVTGDLFAQSYDVVKKPYLKYFQFSPQGIKSPDVXIPLEEPTMMHDFAITENFVVVPDQQVVFKXKEMIRGGSPVIYDKNKVSRFGILDKNATDASKMKWXXAPDCF 399 G+L+TVGR DF GQL MIAHPK+DP TG+L A SYDV+K+PYLKYF F P G KS DV IPLE+PTM+HDFAITEN VVVPD QVVFK +EM+RGGSPV+ DK K SRFG+L K+A DAS+M W PDCF Sbjct: 277 GDLETVGRYDFDGQLGCAMIAHPKLDPATGELHALSYDVIKRPYLKYFYFRPDGTKSDDVEIPLEQPTMIHDFAITENLVVVPDHQVVFKLQEMLRGGSPVVLDKEKTSRFGVLPKHAADASEMAWVDVPDCF 409
BLAST of FC919321 vs. ExPASy Swiss-Prot
Match: NCED2_ARATH (9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic OS=Arabidopsis thaliana GN=NCED2 PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 1.734e-50 Identity = 93/133 (69.92%), Postives = 112/133 (84.21%), Query Frame = -3 Query: 1 GELKTVGRXDFSGQLKSTMIAHPKVDPVTGDLFAQSYDVVKKPYLKYFQFSPQGIKSPDVXIPLEEPTMMHDFAITENFVVVPDQQVVFKXKEMIRGGSPVIYDKNKVSRFGILDKNATDASKMKWXXAPDCF 399 G+L+TVGR DF GQLKS MIAHPK+DPVT +L A SYDVVKKPYLKYF+FSP G+KSP++ IPLE PTM+HDFAITENFVV+PDQQVVFK EMI G SPV++D KVSR GI+ K+AT+AS++ W +P+ F Sbjct: 259 GDLQTVGRYDFDGQLKSAMIAHPKLDPVTKELHALSYDVVKKPYLKYFRFSPDGVKSPELEIPLETPTMIHDFAITENFVVIPDQQVVFKLGEMISGKSPVVFDGEKVSRLGIMPKDATEASQIIWVNSPETF 391 HSP 2 Score: 23.8682 bits (50), Expect = 1.734e-50 Identity = 12/29 (41.38%), Postives = 15/29 (51.72%), Query Frame = -1 Query: 396 NAVFXYFNNCLLAMXXXXXXXXVGVTPSG 482 NA YFNN LLAM + +T +G Sbjct: 231 NAGLVYFNNRLLAMSEDDLPYQLKITQTG 259
BLAST of FC919321 vs. ExPASy Swiss-Prot
Match: NCED6_ARATH (9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic OS=Arabidopsis thaliana GN=NCED6 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 3.134e-42 Identity = 80/133 (60.15%), Postives = 100/133 (75.19%), Query Frame = -3 Query: 1 GELKTVGRXDFSGQLKSTMIAHPKVDPVTGDLFAQSYDVVKKPYLKYFQFSPQGIKSPDVXIPLEEPTMMHDFAITENFVVVPDQQVVFKXKEMIRGGSPVIYDKNKVSRFGILDKNATDASKMKWXXAPDCF 399 G+L+T+GR F Q+ S++IAHPKVD TGDL SY+V+KKP+L+Y +F+ G K+ DV I L EPTM+HDFAITENFVV+PDQQ+VFK EMIRGGSPVIY K K++RFG+L K S + W PDCF Sbjct: 255 GDLETIGRFGFDDQIDSSVIAHPKVDATTGDLHTLSYNVLKKPHLRYLKFNTCGKKTRDVEITLPEPTMIHDFAITENFVVIPDQQMVFKLSEMIRGGSPVIYVKEKMARFGVLSKQDLTGSDINWVDVPDCF 387
BLAST of FC919321 vs. ExPASy Swiss-Prot
Match: CCD1_PHAVU (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Phaseolus vulgaris GN=CCD1 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 5.027e-24 Identity = 53/134 (39.55%), Postives = 80/134 (59.70%), Query Frame = -3 Query: 1 GELKTVGRXDFSGQLKSTMIAHPKVDPVTGDLFAQSYDVVKKPYLKYFQFSPQGIKSPDVXIPLEEPTMMHDFAITENFVVVPDQQVVFKXKEMIRGGSPVI-YDKNKVSRFGILDKNATDASKMKWXXAPDCF 399 G+L+T+G D+ +L + AHPKVDP TG++F+ Y PY+ Y S G V I + +P MMHDFAITEN+ V D ++F+ KEM++ + + +D K +RFG+L + A D ++W P+CF Sbjct: 203 GDLQTLGMLDYDKRLGHSFTAHPKVDPFTGEMFSFGY-AHTPPYITYRVISKDGYMHDPVPITISDPIMMHDFAITENYAVFMDLPLIFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDEQHIRWFELPNCF 335
BLAST of FC919321 vs. ExPASy Swiss-Prot
Match: ZCD_CROSA (Zeaxanthin 7,8(7',8')-cleavage dioxygenase, chromoplast OS=Crocus sativus GN=ZCD PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.910e-23 Identity = 60/132 (45.45%), Postives = 84/132 (63.64%), Query Frame = -3 Query: 10 GELKTVGRXDFSGQLKSTMIAHPKVDPVTGDLFAQSYDVVKKPYLKYFQFSPQGIKS-PDVXI-PLEEPTMMHDFAITENFVVVPDQQVVFKXKEMIRGGSPVIYDKNKVSRFGILDKNATDASKMKWXXAP 399 G++ TVGR + + KST AHPK DPVTG+ F+ SY ++ PY+ Y ++ G KS PDV I +EP+ +HDFAITE++ V PD Q+V K E++RG + D KV R G+L + AT S+M+W P Sbjct: 42 GDISTVGRIENNVSTKSTT-AHPKTDPVTGETFSFSYGPIQ-PYVTYSRYDCDGKKSGPDVPIFSFKEPSFVHDFAITEHYAVFPDIQIVMKPAEIVRGRRMIGPDLEKVPRLGLLPRYATSDSEMRWFDVP 171
BLAST of FC919321 vs. ExPASy Swiss-Prot
Match: CCD1_ARATH (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Arabidopsis thaliana GN=CCD1 PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 1.910e-23 Identity = 55/134 (41.04%), Postives = 78/134 (58.21%), Query Frame = -3 Query: 1 GELKTVGRXDFSGQLKSTMIAHPKVDPVTGDLFAQSYDVVKKPYLKYFQFSPQGIKSPDVXIPLEEPTMMHDFAITENFVVVPDQQVVFKXKEMIRGGSPVI-YDKNKVSRFGILDKNATDASKMKWXXAPDCF 399 G+L+T+G D+ +L + AHPKVDPVTG++F Y PYL Y S GI V I + EP MMHDFAITE + + D + F+ KEM++ + +D K +RFG+L + A D ++W P+CF Sbjct: 201 GDLQTLGIIDYDKRLTHSFTAHPKVDPVTGEMFTFGYSHTP-PYLTYRVISKDGIMHDPVPITISEPIMMHDFAITETYAIFMDLPMHFRPKEMVKEKKMIYSFDPTKKARFGVLPRYAKDELMIRWFELPNCF 333 The following BLAST results are available for this feature:
BLAST of FC919321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC919321 ID=FC919321; Name=FC919321; organism=Citrus clementina; type=EST; length=482bpback to top |