FC920195
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920195 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=At3g01280 PE=1 SV=3) HSP 1 Score: 183.341 bits (464), Expect = 7.277e-46 Identity = 90/173 (52.02%), Postives = 123/173 (71.10%), Query Frame = 1 Query: 52 MSKGPGLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASI 570 M KGPGL+ +IGKKA+DLL KD+N+DQK SI+T+S AGVA+TST KKG L GDVA Q + KN+ D+KV T+S L T T+ E P ++I S KVPD NSGK+E+QY H++A ++++ L Q+P ++ + IG+ +A G + +DT SGNFTK AG+S TK D AS+ Sbjct: 1 MVKGPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASL 173
BLAST of FC920195 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2) HSP 1 Score: 182.185 bits (461), Expect = 1.621e-45 Identity = 88/175 (50.29%), Postives = 120/175 (68.57%), Query Frame = 1 Query: 52 MSKGPGLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIIL 576 M KGPGL+ DIGKKA+DLL KDY++D+K +ISTYS GVA+TS+ KKG L GDV Q K KN+ D+KVDT SN+ TT T+ E P KAI S KVP+ SGK+E+QY H++A +S++ L +P ++ ++ IGT ++AFGA+ +DT G TK A ++ K D S+ L Sbjct: 1 MVKGPGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNKNITTDIKVDTNSNLFTTITVNEPAPGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVGLKANPIVNFSSVIGTNALAFGADISFDTKLGELTKSNAAVNFVKDDLIGSLTL 175
BLAST of FC920195 vs. ExPASy Swiss-Prot
Match: VDAC2_ARATH (Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=HSR2 PE=1 SV=3) HSP 1 Score: 180.644 bits (457), Expect = 4.717e-45 Identity = 85/175 (48.57%), Postives = 115/175 (65.71%), Query Frame = 1 Query: 52 MSKGPGLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIIL 576 M KGPGL+ +IGKKA+DLL +DY DQK S++TYS GVA+T+T KG L GDVA Q K N DVKV T+S++LTT T E P K I K+PD+ SGK EVQYFHD+A ++++ +P ++ + +GT ++ G + Y+T SGNF + AG + TK D AS+IL Sbjct: 1 MVKGPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLIL 175
BLAST of FC920195 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 4.717e-45 Identity = 89/175 (50.86%), Postives = 115/175 (65.71%), Query Frame = 1 Query: 52 MSKGPGLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIIL 576 M KGPGL+ +IGKKA+DLL KDY +D K SI+TYS GV +TS+ KKG L DV Q K KNV D+KVDT SN+ TT T+ E P K I S +VPD SGKLEVQY HD+A +++ L +P ++ + +GT IA G + +DT +G+FTK AG+S T D AS+ L Sbjct: 1 MGKGPGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVTTDIKVDTNSNLFTTITVDEAAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNL 175
BLAST of FC920195 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 4.415e-43 Identity = 84/175 (48.00%), Postives = 117/175 (66.86%), Query Frame = 1 Query: 52 MSKGPGLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIIL 576 M KGPGL++DIGKKA+DLL +DY +D K +++TYS GVA+T++ +KKG L DV+ Q K KN+ DVKVDT SN+ TT T+ E P K I S VPD SGK+E+QY H++A ++I L SP ++ + G ++A G + +DT +GNFTK AG+S + D AS+ L Sbjct: 1 MVKGPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNKNITTDVKVDTNSNVYTTITVDEPAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIGLTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLAL 175
BLAST of FC920195 vs. ExPASy Swiss-Prot
Match: VDAC1_ORYSJ (Mitochondrial outer membrane protein porin OS=Oryza sativa subsp. japonica GN=VDAC1 PE=1 SV=3) HSP 1 Score: 171.014 bits (432), Expect = 3.738e-42 Identity = 79/172 (45.93%), Postives = 119/172 (69.19%), Query Frame = 1 Query: 61 GPGLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIIL 576 GPGL+ +IGKKA+DLL +DY D K +++TY+ GVA+T+T+ KK L G++ +Q K KN+ DVK +++SN++TT T+ E+ P K+I S VPD SGK E+QY HD+A +++I L SP +++++ GT ++A GA+ DT +GN TKY AG+S + D AS+ L Sbjct: 3 GPGLYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNKNITVDVKANSDSNVVTTVTVDELTPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIGLTASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYNAGLSFSNDDLIASLNL 174
BLAST of FC920195 vs. ExPASy Swiss-Prot
Match: VDAC1_WHEAT (Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 6.597e-39 Identity = 76/173 (43.93%), Postives = 113/173 (65.32%), Query Frame = 1 Query: 61 GPGLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEI-LPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIIL 576 GPGL++ IGKKAKDLL +DY D K +++TY+ G A+T+T+ KK L+ G++ +Q K KN+ DVK ++ SN++TT T ++ P K I S VPD SGK+E+QY HD+A ++I L +P ++++ GT ++A GA+ DT + NF KY A +S T D AS+ L Sbjct: 3 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSGAFGTSALAVGADVSLDTATKNFAKYNAALSYTNQDLIASLNL 175
BLAST of FC920195 vs. ExPASy Swiss-Prot
Match: VDAC_MAIZE (Outer plastidial membrane protein porin OS=Zea mays GN=POR1 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.594e-35 Identity = 72/171 (42.11%), Postives = 110/171 (64.33%), Query Frame = 1 Query: 67 GLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEI-LPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIIL 576 GL+ DIGKK +DLL KDYN QK ++T S GVA+T+ +K G++ Q K K + DVK ++ES++LTT T+ E P K+I +L VPD SGKLE QY H++A +++ LN +P ++++ G+ +++ G + +DT + +FTKY A +S+T PD AS+ L Sbjct: 6 GLYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKLTVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLNSNPMVNLSGAFGSKALSVGVDVSFDTATSDFTKYNAALSLTSPDLIASLHL 176 The following BLAST results are available for this feature:
BLAST of FC920195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920195 ID=FC920195; Name=FC920195; organism=Citrus clementina; type=EST; length=580bpback to top |