FC920196
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920196 vs. ExPASy Swiss-Prot
Match: PSB7B_ARATH (Proteasome subunit beta type-7-B OS=Arabidopsis thaliana GN=PBB2 PE=1 SV=2) HSP 1 Score: 328.946 bits (842), Expect = 1.492e-89 Identity = 157/185 (84.86%), Postives = 172/185 (92.97%), Query Frame = 2 Query: 131 MSNSAIDVPSRGGFSFDLCRRNDMLAKKGVNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFEIKXQEGL 685 MS S++D+P +GGFSFDLC+RNDML +KG+ PSF KTGTTIVGLIF+DGVILGADTRATEGPIV DKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQL+LHRY TGR+SRVVTALTLLKKHLF+YQG+V AALVLGGVD TGPHLHTIYPHGSTDTLPFA MGSGSLAAM++FE K +EGL Sbjct: 1 MSQSSVDIPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGL 185
BLAST of FC920196 vs. ExPASy Swiss-Prot
Match: PSB7A_ARATH (Proteasome subunit beta type-7-A OS=Arabidopsis thaliana GN=PBB1 PE=1 SV=2) HSP 1 Score: 328.561 bits (841), Expect = 1.948e-89 Identity = 157/185 (84.86%), Postives = 171/185 (92.43%), Query Frame = 2 Query: 131 MSNSAIDVPSRGGFSFDLCRRNDMLAKKGVNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFEIKXQEGL 685 MS S +DVP +GGFSFDLC+RNDML +KG+ PSF KTGTTIVGLIF+DGVILGADTRATEGPIV DKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQL+LHRY TGR+SRV+TALTLLKKHLF+YQG+V AALVLGGVD TGPHLHTIYPHGSTDTLPFA MGSGSLAAM++FE K +EGL Sbjct: 1 MSQSTVDVPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGL 185
BLAST of FC920196 vs. ExPASy Swiss-Prot
Match: PSB7_DICDI (Proteasome subunit beta type-7 OS=Dictyostelium discoideum GN=psmB7 PE=3 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 1.451e-68 Identity = 117/176 (66.48%), Postives = 148/176 (84.09%), Query Frame = 2 Query: 158 SRGGFSFDLCRRNDMLAKKGVNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFEIKXQEGL 685 +RGGF FDLC RN++L K G+ + F KTGTTIVG++++ GV+LGADTRATEGPIV DKNCEKIHY+A NIYCCGAGTAADTE+ T ++SS+L+LH+ TG+++RV+TALT+LK+ LF YQG++ AAL+LGG+D GP LHTIYPHGSTD LP+ MGSGSLAAMA+FE K + + Sbjct: 5 NRGGFDFDLCNRNNVLEKTGLRMKGFMKTGTTIVGVVYKGGVVLGADTRATEGPIVADKNCEKIHYIADNIYCCGAGTAADTESATALISSKLKLHKLSTGKQTRVITALTMLKQMLFKYQGHISAALILGGIDINGPSLHTIYPHGSTDQLPYVTMGSGSLAAMAVFEAKYKNDM 180
BLAST of FC920196 vs. ExPASy Swiss-Prot
Match: PSB7_HUMAN (Proteasome subunit beta type-7 OS=Homo sapiens GN=PSMB7 PE=1 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 3.346e-65 Identity = 119/184 (64.67%), Postives = 145/184 (78.80%), Query Frame = 2 Query: 131 MSNSAIDVPSRGGFSFDLCRRNDML----AKKGVNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFEIK 670 M+ ++ P GGFSFD CRRN +L AK+G LP RKTGTTI G++++DG++LGADTRATEG +V DKNC KIH+++PNIYCCGAGTAADT+ T ++SS L+LH TGR RVVTA +LK+ LF YQGY+ AALVLGGVD TGPHL++IYPHGSTD LP+ MGSGSLAAMA+FE K Sbjct: 1 MAAVSVYAPPVGGFSFDNCRRNAVLEADFAKRGYKLPKVRKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDK 184
BLAST of FC920196 vs. ExPASy Swiss-Prot
Match: PSB7_MOUSE (Proteasome subunit beta type-7 OS=Mus musculus GN=Psmb7 PE=1 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 4.370e-65 Identity = 120/184 (65.22%), Postives = 145/184 (78.80%), Query Frame = 2 Query: 131 MSNSAIDVPSRGGFSFDLCRRNDML----AKKGVNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFEIK 670 M+ ++ P GGFSFD CRRN +L AKKG LP RKTGTTI G++++DG++LGADTRATEG +V DKNC KIH+++PNIYCCGAGTAADT+ T ++SS L+LH TGR RVVTA +LK+ LF YQGY+ AALVLGGVD TGPHL++IYPHGSTD LP+ MGSGSLAAMA+FE K Sbjct: 1 MAAVSVFQPPVGGFSFDNCRRNAVLEADFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDK 184
BLAST of FC920196 vs. ExPASy Swiss-Prot
Match: PSB7_PIG (Proteasome subunit beta type-7 OS=Sus scrofa GN=PSMB7 PE=2 SV=2) HSP 1 Score: 247.284 bits (630), Expect = 5.707e-65 Identity = 121/183 (66.12%), Postives = 146/183 (79.78%), Query Frame = 2 Query: 140 SAIDVPSR--GGFSFDLCRRNDML----AKKGVNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFEIK 670 +A+ V R GGFSFD CRRN +L AKKG LP+ RKTGTTI G++++DG++LGADTRATEG +V DKNC KIH+++PNIYCCGAGTAADT+ T ++SS L+LH TGR RVVTA +LK+ LF YQGY+ AALVLGGVD TGPHL++IYPHGSTD LP+ MGSGSLAAMA+FE K Sbjct: 2 AAVSVYERPVGGFSFDNCRRNAILEADFAKKGYKLPTARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDK 184
BLAST of FC920196 vs. ExPASy Swiss-Prot
Match: PSB7_BOVIN (Proteasome subunit beta type-7 OS=Bos taurus GN=PSMB7 PE=1 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 5.707e-65 Identity = 121/183 (66.12%), Postives = 146/183 (79.78%), Query Frame = 2 Query: 140 SAIDVPSR--GGFSFDLCRRNDML----AKKGVNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFEIK 670 +A+ V R GGFSFD CRRN +L AKKG LP+ RKTGTTI G++++DG++LGADTRATEG +V DKNC KIH+++PNIYCCGAGTAADT+ T ++SS L+LH TGR RVVTA +LK+ LF YQGY+ AALVLGGVD TGPHL++IYPHGSTD LP+ MGSGSLAAMA+FE K Sbjct: 2 AAVSVYERPVGGFSFDNCRRNAVLEADFAKKGYKLPTARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDK 184
BLAST of FC920196 vs. ExPASy Swiss-Prot
Match: PSB7_RAT (Proteasome subunit beta type-7 OS=Rattus norvegicus GN=Psmb7 PE=1 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.271e-64 Identity = 118/173 (68.21%), Postives = 140/173 (80.92%), Query Frame = 2 Query: 164 GGFSFDLCRRNDML----AKKGVNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFEIK 670 GGFSFD CRRN +L AKKG LP RKTGTTI G++++DG++LGADTRATEG +V DKNC KIH+++PNIYCCGAGTAADT+ T ++SS L+LH TGR RVVTA +LK+ LF YQGY+ AALVLGGVD TGPHL++IYPHGSTD LP+ MGSGSLAAMA+FE K Sbjct: 12 GGFSFDNCRRNAVLEADFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDK 184
BLAST of FC920196 vs. ExPASy Swiss-Prot
Match: PSB7_SCHPO (Probable proteasome subunit beta type-7 OS=Schizosaccharomyces pombe GN=SPAC23D3.07 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.174e-56 Identity = 104/178 (58.43%), Postives = 134/178 (75.28%), Query Frame = 2 Query: 152 VPSRGGFSFDLCRRNDMLAKKGVNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFEIKXQEGL 685 + R GF F+ +RN +L +KG P TGTTIVG+I +D ++LGADTRAT GPI+ DKNC+K+H ++PNI+C GAGTAADTE VT M+SS ++LH +T R+ RVVTALT+LK+HLF YQG++ A LVLGG DC GPHL TI HGS+D LP+ +GSGSLAA+++ E K Q L Sbjct: 4 INERKGFDFEYYQRNLLLQEKGFPTPKATSTGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEFVTSMISSNIELHSLYTNRKPRVVTALTMLKQHLFRYQGHIGAYLVLGGYDCKGPHLFTIAAHGSSDKLPYVALGSGSLAAISVLETKYQPDL 181
BLAST of FC920196 vs. ExPASy Swiss-Prot
Match: PSB10_HUMAN (Proteasome subunit beta type-10 OS=Homo sapiens GN=PSMB10 PE=1 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 5.920e-54 Identity = 101/177 (57.06%), Postives = 130/177 (73.45%), Query Frame = 2 Query: 161 RGGFSFDLCRRNDMLAK--KGVNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFEIKXQEGL 685 RGGFSF+ C+RN L + G+ +P RKTGTTI GL+FQDGVILGADTRAT +V DK+CEKIH++AP IYCCGAG AAD E T MV+S+++LH TGRE RV T +L++ LF YQG+V A+L++GGVD TGP L+ ++PHGS LPF +GSG AA+A+ E + Q + Sbjct: 9 RGGFSFENCQRNASLERVLPGLKVPHARKTGTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLIVGGVDLTGPQLYGVHPHGSYSRLPFTALGSGQDAALAVLEDRFQPNM 185 The following BLAST results are available for this feature:
BLAST of FC920196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920196 ID=FC920196; Name=FC920196; organism=Citrus clementina; type=EST; length=686bpback to top |