FC920234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_MICAN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Microcystis aeruginosa (strain NIES-843) GN=gatA PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 7.702e-41 Identity = 75/159 (47.17%), Postives = 117/159 (73.58%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E TA ++A +L+R++ EPQ+KSF+H++ ++ L +AQ +D+KI R E++ LAG+ + +KDN+CT +P+T SR+LEN+ PP+++T +K+++ ++VGKTNLDEF MGS+TE+S + VTANPWD+SRVP ++CVV+LGSDTG Sbjct: 14 KEKTAVEIATEFLARIQALEPQVKSFLHLTPDLALAQAQKVDEKIARGESLHLLAGIPIALKDNLCTKGIPTTCASRILENFVPPYESTVTQKLRDLGAVIVGKTNLDEFAMGSSTENSGYHVTANPWDLSRVPGGSSGGSAAAVAAQECVVALGSDTG 172
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_ANAVT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gatA PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.415e-39 Identity = 74/159 (46.54%), Postives = 112/159 (70.44%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E +A ++ + L ++ EP+L SF+H++ L++A+++D KI E +G LAG+ +GVKDN+CT +P+T SR+LEN+ PP+++T +K+ + +VVGKTNLDEF MGS+TE+S++QVTANPWD+SRVP +CVV+LGSDTG Sbjct: 14 KERSAVEITQETLDHIQELEPKLHSFLHITAQQALEQARAVDAKIAAGEEIGLLAGIPIGVKDNMCTKGIPTTCASRILENFVPPYESTVTQKLLDAGAVVVGKTNLDEFAMGSSTENSAYQVTANPWDLSRVPGGSSGGSAAAVAAEECVVALGSDTG 172
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_ANASP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anabaena sp. (strain PCC 7120) GN=gatA PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.415e-39 Identity = 74/159 (46.54%), Postives = 112/159 (70.44%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E +A ++ + L ++ EP+L SF+H++ L++A+++D KI E +G LAG+ +GVKDN+CT +P+T SR+LEN+ PP+++T +K+ + +VVGKTNLDEF MGS+TE+S++QVTANPWD+SRVP +CVV+LGSDTG Sbjct: 14 KERSAVEITQETLDHIQELEPKLHSFLHITAQQALEQARAVDAKIAAGEEIGLLAGIPIGVKDNMCTKGIPTTCASRILENFVPPYESTVTQKLLDAGAVVVGKTNLDEFAMGSSTENSAYQVTANPWDLSRVPGGSSGGSAAAVAAEECVVALGSDTG 172
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CYAP7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp. (strain PCC 7424) GN=gatA PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.230e-38 Identity = 75/159 (47.17%), Postives = 109/159 (68.55%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E +A ++ L R++ EP L SF+H++ + L+ A+ +D KI E +G L G+ VG+KDN+CT +P+T GS++LEN+ PP+++T +K+K+ I +GKTNLDEF MGS+TESS +QVTANPWD+SRVP +CVV+LGSDTG Sbjct: 14 KERSAVEITTEALDRIEKLEPLLHSFLHITADQALESAKKVDAKIAAKEEIGLLEGIPVGIKDNMCTQGIPTTCGSKILENFVPPYESTVTQKLKDSGAITLGKTNLDEFAMGSSTESSGYQVTANPWDLSRVPGGSSGGSAAAVASEECVVALGSDTG 172
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_NOSP7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=gatA PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.103e-38 Identity = 74/159 (46.54%), Postives = 113/159 (71.07%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E +A ++ + L R++ EP+L SF+ V+ L++A ++D KI E +G LAG+ VG+KDN+CT +P+T SR+LEN+ PP+++TA +K+ + ++VGKTNLDEF MGS+TE+S++QVTANPW++SRVP ++CVV+LGSDTG Sbjct: 14 KERSAVEITQEALERIEALEPKLHSFLCVTAERALEQAGAVDAKIAAGEEIGLLAGIPVGIKDNLCTKGIPTTCASRILENFVPPYESTATQKLADAGAVMVGKTNLDEFAMGSSTENSAYQVTANPWNLSRVPGGSSGGSAAAVSSQECVVALGSDTG 172
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CYAP8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp. (strain PCC 8801) GN=gatA PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.103e-38 Identity = 73/159 (45.91%), Postives = 110/159 (69.18%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E +A ++ L R+ EPQ+KSF+ ++ + L+ A+++D KI E +G LAG+ +G+KDN+ T +P+T GSR+LEN+ PP+++T +K++E ++VGKTNLDEF MGS+TE+S +QVTANPWD+ RVP +CVV+LGSDTG Sbjct: 14 KERSAVEITTEALERIAAIEPQVKSFLCITADRALETAKAVDQKIAAKEEIGLLAGIPIGIKDNMSTKGIPTTCGSRILENFIPPYESTVTQKLQEIGAVMVGKTNLDEFAMGSSTENSGYQVTANPWDLERVPGGSSGGSAAAVAAEECVVALGSDTG 172
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CYAA5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp. (strain ATCC 51142) GN=gatA PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.970e-38 Identity = 71/159 (44.65%), Postives = 112/159 (70.44%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E +A ++ L R+ + ++KSF+ V+ ++ L+ A+ +D+KI +NE +G LAG+ +G+KDN+CT + +T GS++L N+ PP+++T +K+K+ ++VGKTNLDEF MGS+TE+S +QVTANPWD+SRVP +CVV+LGSDTG Sbjct: 14 KERSAVEITTEALERINAVDSKVKSFLQVTADHALETAKKVDEKIAKNEEIGLLAGIPIGIKDNMCTTGIKTTCGSKILANFVPPYESTVTQKLKDAGAVMVGKTNLDEFAMGSSTENSGYQVTANPWDLSRVPGGSSGGSAAAVAASECVVALGSDTG 172
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_SYNE7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus elongatus (strain PCC 7942) GN=gatA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.041e-37 Identity = 70/159 (44.03%), Postives = 111/159 (69.81%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E +A ++AE L R++ EPQLKSF+HV+ + + +A+++D +I E + LAG+ +G+KDN+CT +P+T S++L+ + PP+++T +++ E + VGKTNLDEF MGS+TE+S++Q TANPWD++RVP +CVV+LGSDTG Sbjct: 14 KERSAVEIAEAALQRIETLEPQLKSFLHVTADQAIAQAKAVDQRIAAGEEISLLAGIPIGIKDNLCTRGIPTTCASKILQGFVPPYESTVTQRLAEAGAVAVGKTNLDEFAMGSSTENSAYQTTANPWDLTRVPGGSSGGSAAAVAADECVVALGSDTG 172
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_SYNP6 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=gatA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.029e-37 Identity = 69/159 (43.40%), Postives = 111/159 (69.81%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E +A ++AE L R++ EPQLKSF+HV+ + + +A+++D +I E + LAG+ +G+KDN+CT +P+T S++L+ + PP+++T +++ E + VGKTNLDEF +GS+TE+S++Q TANPWD++RVP +CVV+LGSDTG Sbjct: 14 KERSAVEIAEAALQRIETLEPQLKSFLHVTADQAIAQAKAVDQRIAAGEEISLLAGIPIGIKDNLCTRGIPTTCASKILQGFVPPYESTVTQRLAEAGAVAVGKTNLDEFAVGSSTENSAYQTTANPWDLTRVPGGSSGGSAAAVAADECVVALGSDTG 172
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_SYNJA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain JA-3-3Ab) GN=gatA PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.373e-36 Identity = 75/159 (47.17%), Postives = 108/159 (67.92%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E +A ++A YL RL EPQLKSFI V+ + L++A+++D +I+ E +GPLAG+ + VKDN+CT + +T SR+LE + PP+++T ++ + VGKTNLDEF MGS+TE+S+FQ TANPWD++RVP Q VV+LGSDTG Sbjct: 14 KERSAEEIAREYLERLAQLEPQLKSFITVTEELALQQAKAVDARIRAGEEIGPLAGIPLAVKDNLCTQGIRTTCASRMLEGFIPPYESTVTARLAAAGMVTVGKTNLDEFAMGSSTENSAFQRTANPWDLTRVPGGSSGGSAAAVAADQAVVALGSDTG 172 The following BLAST results are available for this feature:
BLAST of FC920234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920234 ID=FC920234; Name=FC920234; organism=Citrus clementina; type=EST; length=697bpback to top |