FC920262

Overview
NameFC920262
Unique NameFC920262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARL8A_HUMAN (ADP-ribosylation factor-like protein 8A OS=Homo sapiens GN=ARL8A PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.993e-56
Identity = 100/147 (68.03%), Postives = 127/147 (86.39%), Query Frame = 3 
Query:  213 ASFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGREVCCF 653
            A F+K+EMEL+L+GLQ +GKT+ VNV+A+G ++EDMIPTVGFNMRK+TKGNVTIKLWD+GGQPRFRSMWERYCR VSAIVY+VDAAD + +  S++ELH+LL+KP L GIP+LVLGNK D PGAL ++ L ++M L +I  RE+CC+
Sbjct:   14 ALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIEKMNLSAIQDREICCY 160
[Close]
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARL8A_CHICK (ADP-ribosylation factor-like protein 8A OS=Gallus gallus GN=ARL8A PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.993e-56
Identity = 100/147 (68.03%), Postives = 127/147 (86.39%), Query Frame = 3 
Query:  213 ASFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGREVCCF 653
            A F+K+EMEL+L+GLQ +GKT+ VNV+A+G ++EDMIPTVGFNMRK+TKGNVTIKLWD+GGQPRFRSMWERYCR VSAIVY+VDAAD + +  S++ELH+LL+KP L GIP+LVLGNK D PGAL ++ L ++M L +I  RE+CC+
Sbjct:   14 ALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIEKMNLSAIQDREICCY 160
[Close]
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARL8_DROME (ADP-ribosylation factor-like protein 8 OS=Drosophila melanogaster GN=Gie PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 5.799e-56
Identity = 100/145 (68.97%), Postives = 124/145 (85.52%), Query Frame = 3 
Query:  219 FFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGREVCCF 653
            F+K+EMEL+L+GLQ +GKT+ VNV+A+G ++EDMIPTVGFNMRK+T+GNVTIK+WD+GGQPRFRSMWERYCR V+AIVY+VDAAD D L  SR+ELH LL+KP L+GIP+LVLGNK D PGAL +  L + M L SI  RE+CC+
Sbjct:   16 FWKEEMELTLVGLQFSGKTTFVNVIASGQFAEDMIPTVGFNMRKITRGNVTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQLAGIPVLVLGNKRDLPGALDETGLIERMNLSSIQDREICCY 160
[Close]
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARL8A_XENTR (ADP-ribosylation factor-like protein 8A OS=Xenopus tropicalis GN=arl8a PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 9.892e-56
Identity = 100/147 (68.03%), Postives = 125/147 (85.03%), Query Frame = 3 
Query:  213 ASFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGREVCCF 653
            A F+K+EMEL+L+GLQ +GKT+ VNV+A+G ++EDMIPTVGFNMRK+TKGNVTIKLWD+GGQPRFRSMWERYCR VSAIVY+VDAAD D +  S++ELH+LL+K  L GIP+LVLGNK D PGAL ++ L + M L +I  RE+CC+
Sbjct:   14 ALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQDKIEASKNELHNLLDKAQLQGIPVLVLGNKRDIPGALDEKELIERMNLSAIQDREICCY 160
[Close]
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARL8B_RAT (ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus GN=Arl8b PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.687e-55
Identity = 98/145 (67.59%), Postives = 125/145 (86.21%), Query Frame = 3 
Query:  219 FFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGREVCCF 653
            F+K+EMEL+L+GLQ +GKT+ VNV+A+G +SEDMIPTVGFNMRKVTKGNVTIK+WD+GGQPRFRSMWERYCR V+AIVY++DAAD + +  SR+ELH+LL+KP L GIP+LVLGNK D P AL ++ L ++M L +I  RE+CC+
Sbjct:   16 FWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCY 160
[Close]
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARL8B_MOUSE (ADP-ribosylation factor-like protein 8B OS=Mus musculus GN=Arl8b PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.687e-55
Identity = 98/145 (67.59%), Postives = 125/145 (86.21%), Query Frame = 3 
Query:  219 FFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGREVCCF 653
            F+K+EMEL+L+GLQ +GKT+ VNV+A+G +SEDMIPTVGFNMRKVTKGNVTIK+WD+GGQPRFRSMWERYCR V+AIVY++DAAD + +  SR+ELH+LL+KP L GIP+LVLGNK D P AL ++ L ++M L +I  RE+CC+
Sbjct:   16 FWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCY 160
[Close]
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARL8B_HUMAN (ADP-ribosylation factor-like protein 8B OS=Homo sapiens GN=ARL8B PE=1 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.687e-55
Identity = 98/145 (67.59%), Postives = 125/145 (86.21%), Query Frame = 3 
Query:  219 FFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGREVCCF 653
            F+K+EMEL+L+GLQ +GKT+ VNV+A+G +SEDMIPTVGFNMRKVTKGNVTIK+WD+GGQPRFRSMWERYCR V+AIVY++DAAD + +  SR+ELH+LL+KP L GIP+LVLGNK D P AL ++ L ++M L +I  RE+CC+
Sbjct:   16 FWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCY 160
[Close]
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARL8A_MOUSE (ADP-ribosylation factor-like protein 8A OS=Mus musculus GN=Arl8a PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.687e-55
Identity = 99/147 (67.35%), Postives = 126/147 (85.71%), Query Frame = 3 
Query:  213 ASFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGREVCCF 653
            A F+K+EMEL+L+GLQ +GKT+ VNV+A+G ++EDMIPTVGFNMRK+TKGNVTIKLWD+GGQPRFRSMWERYCR VSAIVY+VDAAD + +  S++ELH+LL+KP L GIP+LVLGNK D  GAL ++ L ++M L +I  RE+CC+
Sbjct:   14 ALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLAGALDEKELIEKMNLSAIQDREICCY 160
[Close]
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: AR8BA_DANRE (ADP-ribosylation factor-like protein 8B-A OS=Danio rerio GN=arl8ba PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.204e-55
Identity = 99/145 (68.28%), Postives = 125/145 (86.21%), Query Frame = 3 
Query:  219 FFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGREVCCF 653
            F+K+EMEL+L+GLQ +GKT+ VNV+A+G +SEDMIPTVGFNMRKVTKGNVTIK+WD+GGQPRFRSMWERYCR V+AIVY+VDAAD + +  SR+ELH+LL+KP L GIP+LVLGNK D P AL ++ L ++M L +I  RE+CC+
Sbjct:   16 FWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMVDAADREKVEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLAAIQDREICCY 160
[Close]
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARL8B_MACFA (ADP-ribosylation factor-like protein 8B OS=Macaca fascicularis GN=ARL8B PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.759e-55
Identity = 97/145 (66.90%), Postives = 125/145 (86.21%), Query Frame = 3 
Query:  219 FFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGREVCCF 653
            F+K+EMEL+L+GLQ +GKT+ VNV+A+G +SEDMIPTVGFNMRKVTKGNVTIK+WD+GGQPR+RSMWERYCR V+AIVY++DAAD + +  SR+ELH+LL+KP L GIP+LVLGNK D P AL ++ L ++M L +I  RE+CC+
Sbjct:   16 FWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRYRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCY 160
The following BLAST results are available for this feature:
BLAST of FC920262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
ARL8A_HUMAN1.993e-5668.03ADP-ribosylation factor-like protein 8A OS=Homo sa... [more]
ARL8A_CHICK1.993e-5668.03ADP-ribosylation factor-like protein 8A OS=Gallus ... [more]
ARL8_DROME5.799e-5668.97ADP-ribosylation factor-like protein 8 OS=Drosophi... [more]
ARL8A_XENTR9.892e-5668.03ADP-ribosylation factor-like protein 8A OS=Xenopus... [more]
ARL8B_RAT1.687e-5567.59ADP-ribosylation factor-like protein 8B OS=Rattus ... [more]
ARL8B_MOUSE1.687e-5567.59ADP-ribosylation factor-like protein 8B OS=Mus mus... [more]
ARL8B_HUMAN1.687e-5567.59ADP-ribosylation factor-like protein 8B OS=Homo sa... [more]
ARL8A_MOUSE1.687e-5567.35ADP-ribosylation factor-like protein 8A OS=Mus mus... [more]
AR8BA_DANRE2.204e-5568.28ADP-ribosylation factor-like protein 8B-A OS=Danio... [more]
ARL8B_MACFA3.759e-5566.90ADP-ribosylation factor-like protein 8B OS=Macaca ... [more]

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Properties
Property NameValue
Genbank descriptionC32006A09EF RVDevelop1 Citrus clementina cDNA clone C32006A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920262 ID=FC920262; Name=FC920262; organism=Citrus clementina; type=EST; length=654bp
GATACCATATTCATTCAAGTTACGTATATTTGGTCAGTTTGTGGGAACGT
ACGAATACGGTAAATCAGTAGACGCAAGCGAAGGAGGAAGCTTCATCAGT
GGGGGGTCAATTCAAGGCTTAGACCTCAATTGGTTTCTGATTCTGTGATC
ATCGTCATCACCATCATCATTATCAATGGGATTGTGGGAAGCTTTTCTGA
ATTGGCTCCGCAGCCTCTTTTTTTAAACAGGAAATGGAGCTGTCCCTGAT
TGGACTTCAGAATGCTGGAAAGACCTCACTTGTAAATGTTGTTGCTACTG
GTGGATATAGCGAGGACATGATCCCTACGGTCGGATTCAACATGAGGAAA
GTGACAAAAGGAAATGTTACAATTAAGCTTTGGGATCTTGGAGGTCAACC
TAGATTCCGCAGTATGTGGGAGCGGTATTGCCGGGCAGTTTCTGCTATTG
TTTATGTGGTTGATGCTGCTGATCCTGACAACCTGAGCATTTCAAGAAGT
GAACTTCATGATTTGCTGAACAAACCCTCACTTAGTGGTATCCCTTTACT
GGTGCTAGGGAACAAGATTGACAAACCCGGAGCTCTATCTAAACAGGCTT
TAACTGATGAAATGGGACTAAAATCCATCACCGGCAGAGAAGTTTGCTGC
TTTA
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