FC920266

Overview
NameFC920266
Unique NameFC920266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length668
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14439 contig Ccv1_Contig14439:38..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920266 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.075e-55
Identity = 104/162 (64.20%), Postives = 124/162 (76.54%), Query Frame = 1
Query:  175 MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPK--EGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSEQHNCXFDYRTAARDAIIKA 654
            M+H ETGCQ P EGPILCINNCGFFGS ATMNMCSKC+K++++KQ+QAKLAASSI SIVN     +G E + A   +V  + VE K +  QP+  +  SE V   PK  EGP+RCS+C+KRVGLTGF CRCGNLYC  HRYS++H+C FDYRTAARDAI KA
Sbjct:    1 MEHKETGCQQP-EGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVN--GGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKA 159          
BLAST of FC920266 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 5.075e-55
Identity = 104/162 (64.20%), Postives = 124/162 (76.54%), Query Frame = 1
Query:  175 MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPK--EGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSEQHNCXFDYRTAARDAIIKA 654
            M+H ETGCQ P EGPILCINNCGFFGS ATMNMCSKC+K++++KQ+QAKLAASSI SIVN     +G E + A   +V  + VE K +  QP+  +  SE V   PK  EGP+RCS+C+KRVGLTGF CRCGNLYC  HRYS++H+C FDYRTAARDAI KA
Sbjct:    1 MEHKETGCQQP-EGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVN--GGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKA 159          
BLAST of FC920266 vs. ExPASy Swiss-Prot
Match: SAP4_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica GN=SAP4 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 8.102e-53
Identity = 99/162 (61.11%), Postives = 120/162 (74.07%), Query Frame = 1
Query:  175 MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKP--KEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSEQHNCXFDYRTAARDAIIKA 654
            M+H E GCQ P EGPILCINNCGFFGS ATMNMCSKC+K++++K++QAKLAASSI SIVN           A+ +  V  + VE K + VQP+  +  SE V   P  KEGP+RC++C+KRVGLTGF CRCGN+YC  HRYS++H C FDYRTAARDAI KA
Sbjct:    1 MEHKEAGCQQP-EGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIVAASGSTAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKA 161          
BLAST of FC920266 vs. ExPASy Swiss-Prot
Match: SAP2_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana GN=SAP2 PE=2 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 3.764e-50
Identity = 92/163 (56.44%), Postives = 121/163 (74.23%), Query Frame = 1
Query:  175 MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESV---EAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSEQHNCXFDYRTAARDAIIKA 654
            MDHD+TGCQ+PPEGP LC NNCGFFGS ATMNMCSKC+KD++ +Q+Q    AS++      +SS+   E+  AA VD++  SVEP  +SVQPS    ++E V   EA   +GPSRC++C KRVGLTGFKCRCG+L+C +HRY++ H+C F+Y  AA++AI KA
Sbjct:    1 MDHDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSG--TSSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCNKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKA 161          
BLAST of FC920266 vs. ExPASy Swiss-Prot
Match: SAP4_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.138e-30
Identity = 66/157 (42.04%), Postives = 89/157 (56.69%), Query Frame = 1
Query:  184 DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSEQHNCXFDYRTAARDAIIKA 654
            +E  C+ P EG  LC+NNCGFFGS ATMN+CS CY D+ LKQ Q     S++ S ++   +       A   +     + E K I +            +  P + P+RC+ C+KRVGLTGF CRCG  +C SHRY E H C FD+++A R+ I KA
Sbjct:    3 EEHRCETP-EGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSLSPVIAPVLENYAAELEIPTTKKTEEKKPIQIPTE---------QPSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKA 149          
BLAST of FC920266 vs. ExPASy Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.487e-30
Identity = 73/165 (44.24%), Postives = 102/165 (61.82%), Query Frame = 1
Query:  184 DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSE--------SVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSEQHNCXFDYRTAARDAIIKA 654
            +E  CQ P E   LC+NNCGF GS ATMN+CS CY D+ LKQ Q    +SSI S V E+S S    S +++ +   +S + P ++   PS   E+ E        + E   ++ P+RC++C+KRVGLTGFKCRCG ++C  HRY E H C +D+++A R+ I KA
Sbjct:    3 EEHRCQTP-ESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQ---SSSIKSTV-ESSLSVSPPSSSSSEI---SSPIIPPLLK-NPSVKLEVPEKKAVISLPTTEQNQQQRPNRCTTCRKRVGLTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKA 158          
BLAST of FC920266 vs. ExPASy Swiss-Prot
Match: SAP9_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.650e-30
Identity = 66/148 (44.59%), Postives = 88/148 (59.46%), Query Frame = 1
Query:  208 PEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSEQHNCXFDYRTAARDAIIK 651
            PE PILC+NNCGFFGS  T NMCSKCY+D +       +AA  +       +SS+ +    A   +V A++VE K  + +P             PK   +RC SC+K+VGLTGF+CRCG  +C +HRY+E H+C FDY+ A RD I K
Sbjct:   17 PEAPILCVNNCGFFGSSMTNNMCSKCYRDFV---KVTTMAAPVVEKKAFTPASSSKTPLEPAKPDEVPAAAVEDKQAAQEP-------------PKPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAK 148          
BLAST of FC920266 vs. ExPASy Swiss-Prot
Match: SAP7_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana GN=SAP7 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.380e-30
Identity = 60/153 (39.22%), Postives = 96/153 (62.75%), Query Frame = 1
Query:  205 PPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSC---ASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSEQHNCXFDYRTAARDAIIKA 654
            PP  P LC N CGFFGS + MN+CSKCY+ +  ++DQ  +A +++ + +   S S  +       ++++ + +E  +++ +PS    A+E  E+  ++P    +RC SC K+VG+ GFKC+CG+ +C SHRY E+H C FD++   RDAI KA
Sbjct:   12 PPTEPKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAAVKNSLKLPSCSIIAPG-QKHPLEIKPAHLETVVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKA 163          
BLAST of FC920266 vs. ExPASy Swiss-Prot
Match: SAP1_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana GN=SAP1 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.049e-28
Identity = 60/149 (40.27%), Postives = 81/149 (54.36%), Query Frame = 1
Query:  208 PEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSEQHNCXFDYRTAARDAIIKA 654
            P  P LC+  CGFFGS + MN+CSKCY+DI   ++Q   A +++   +N        +     T  V  S           S A+ L       PK   +RC SC K+VG+TGFKCRCG+ +C +HRY E H C FD++  AR+AI KA
Sbjct:   13 PSEPKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLNPNKPKTQPQQSQEITQGVLGSGSSSSSTRGGDSAAAPLDP-----PKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAREAIAKA 156          
BLAST of FC920266 vs. ExPASy Swiss-Prot
Match: SAP6_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.539e-27
Identity = 64/156 (41.03%), Postives = 84/156 (53.85%), Query Frame = 1
Query:  184 DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSEQHNCXFDYRTAARDAIIK 651
            +ETG   P E PILC+NNCGFFGS  T NMCSKCY+D +         A ++ ++V +   ++ S +     V    S           S A       E  PK   +RC SC+K+VGLTGFKCRCG  +C  HRY++ H C FDY+   R+ I K
Sbjct:   11 EETGVHTP-EAPILCVNNCGFFGSRMTENMCSKCYRDTV--------KAKTVATVVEKKPLASLSSTPLVTEVTDGGSG----------SVADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAK 147          
The following BLAST results are available for this feature:
BLAST of FC920266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
SAP8_ORYSJ5.075e-5564.20Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSI5.075e-5564.20Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ORYSJ8.102e-5361.11Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP2_ARATH3.764e-5056.44Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ARATH1.138e-3042.04Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ARATH1.487e-3044.24Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP9_ORYSJ5.650e-3044.59Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP7_ARATH7.380e-3039.22Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ARATH4.049e-2840.27Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ORYSJ1.539e-2741.03Zinc finger A20 and AN1 domain-containing stress-a... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32006B01EF RVDevelop1 Citrus clementina cDNA clone C32006B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920266 ID=FC920266; Name=FC920266; organism=Citrus clementina; type=EST; length=668bp
GGACACCCGGAAAGGGAAACGAGGACGTCTCTAATCGGTTTTTGCCTGCT
CTCTCCCCGTAGGCCGATCTGGTCCATTTAATTTTAGGGGCTCATTGGAT
GCTGGTTTGAGCTCGGGGATCGGCTTAAGGGATTCATTGCTGTTTCTTCT
GTTGCTCGCAGGGGTGGTGAAAACATGGACCATGATGAGACTGGATGCCA
AGCTCCTCCTGAGGGCCCTATCTTGTGCATCAACAATTGTGGTTTCTTTG
GAAGTGTGGCTACTATGAATATGTGTTCCAAATGCTACAAGGATATAATG
CTGAAACAGGATCAAGCTAAGCTTGCTGCTTCATCTATTGGAAGCATTGT
GAATGAAACGTCAAGCAGCAATGGAAGTGAATCTGTTGCTGCTGCCACTG
TTGATGTGCAAGCTAGTTCAGTGGAGCCAAAAATCATCTCTGTGCAGCCA
TCATGTGCTTCAGAATTGAGCGAGAGTGTGGAGGCAAAGCCGAAGGAGGG
TCCCAGCCGGTGCAGCAGTTGCAAGAAGCGTGTTGGTTTAACAGGATTCA
AATGTCGCTGTGGTAACTTATACTGTGTGTCACATCGCTATTCGGAACAA
CATAACTGCNCCTTTGACTACCGCACTGCTGCTAGGGATGCTATAATTAA
AGCAACCCTGTGATCAGG
back to top