FC920267
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920267 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 2.197e-49 Identity = 84/165 (50.91%), Postives = 96/165 (58.18%), Query Frame = 1 Query: 49 IGVKEMLGNPLNVSSAVRTSAPGASNPSTFKPVALFXXXXXXXXXXXXXXXXXXXNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSIYQAYELIHARWAMLGAAG 543 +GV EMLG PLN + R+SAP AS+PSTFK VALF ++ELAKWYGPDRRIFLP+GLLDRSEIPEYL GEV G+ YGYDPFGL KKP++F+ YQA+ELIHARWAMLGAAG Sbjct: 4 LGVSEMLGTPLNFRAVSRSSAPLASSPSTFKTVALFSKKKPAPAKSKAVSET---SDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGD--------------------------------------YGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAG 127 HSP 2 Score: 66.2402 bits (160), Expect = 2.197e-49 Identity = 28/30 (93.33%), Postives = 30/30 (100.00%), Query Frame = 2 Query: 566 KFGAHCGPEAVWFKTGALLLDGNTLNYFGK 655 K+GA+CGPEAVWFKTGALLLDGNTLNYFGK Sbjct: 136 KYGANCGPEAVWFKTGALLLDGNTLNYFGK 165
BLAST of FC920267 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 2.322e-11 Identity = 38/105 (36.19%), Postives = 47/105 (44.76%), Query Frame = 1 Query: 229 KWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSIYQAYELIHARWAMLGAAG 543 ++YGPDR FL G ++ PEYLTGE PG+ YG+D GLS P F+ Y+ ELIHARWA+LGA G Sbjct: 32 EFYGPDRAKFL--GPFSENDTPEYLTGEFPGD--------------------------------------YGWDTAGLSADPQTFARYREIELIHARWALLGALG 96 HSP 2 Score: 26.9498 bits (58), Expect = 2.322e-11 Identity = 11/21 (52.38%), Postives = 12/21 (57.14%), Query Frame = 2 Query: 590 EAVWFKTGALLLDGNTLNYFG 652 E VWFK GA + LNY G Sbjct: 113 EPVWFKAGAQIFADGGLNYLG 133 The following BLAST results are available for this feature:
BLAST of FC920267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920267 ID=FC920267; Name=FC920267; organism=Citrus clementina; type=EST; length=658bpback to top |