FC920274

Overview
NameFC920274
Unique NameFC920274
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14110 contig Ccv1_Contig14110:1..692. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920274 vs. ExPASy Swiss-Prot
Match: CNGT2_ARATH (Cytokinin-N-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT76C2 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.443e-40
Identity = 89/209 (42.58%), Postives = 122/209 (58.37%), Query Frame = 2
Query:   62 QQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSETEASTTDFVALISVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKXXXXXXXXXXXXXXXXXXXXXXXXQKGYFPIQDSHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEAIHQMKASSGCIW 688
            +++ G R+ILFPLP QG INPMLQLANIL+ +GFSIT+IHT+FN+P  S++P FTF  I DGLSETE      ++L++ +++   +PF+DCL K+L   E KE E + CLI D  W FT  V+ESLK                         KGY P+ +S + E  VPE PPL+ +D+  +   + E L  F    +     SSG I+
Sbjct:    3 EKRNGLRVILFPLPLQGCINPMLQLANILHVRGFSITVIHTRFNAPKASSHPLFTFLQIPDGLSETEIQ-DGVMSLLAQINLNAESPFRDCLRKVL--LESKESERVTCLIDDCGWLFTQSVSESLKLPRLVLCTFKATFFNAYPSLPLIRTKGYLPVSES-EAEDSVPEFPPLQKRDLSKVFGEFGEKLDPFLHAVVETTIRSSGLIY 207          
BLAST of FC920274 vs. ExPASy Swiss-Prot
Match: CNGT1_ARATH (Cytokinin-N-glucosyltransferase 1 OS=Arabidopsis thaliana GN=UGT76C1 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.208e-39
Identity = 86/213 (40.38%), Postives = 127/213 (59.62%), Query Frame = 2
Query:   59 MQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSETEASTTDFVALISVLHVKCAAPFQDCLAKLLSNAEEK--EEEPIACLITDASWFFTHDVAESLKXXXXXXXXXXXXXXXXXXXXXXXXQKGYFPIQDSHDLEAPVPELPPLRMKDIPVI--ETLYQETLHQFAAEAIHQMKASSGCI 685
            M+++  R++ILFPLP QG INPMLQLA ILYS+GFSITIIHT+FN+P  S++P FTF  I+DGLSE++  + D +  +++L+  C  PF++CLAKL+  + +   E+  I+C+I D+ W FT  VAES                          ++G+ P+ DS + +  VPE PPLR KD+  I   +   + L  +  + +   K +SG I
Sbjct:    1 MEKRNERQVILFPLPLQGCINPMLQLAKILYSRGFSITIIHTRFNAPKSSDHPLFTFLQIRDGLSESQTQSRDLLLQLTLLNNNCQIPFRECLAKLIKPSSDSGTEDRKISCVIDDSGWVFTQSVAESFNLPRFVLCAYKFSFFLGHFLVPQIRREGFLPVPDS-EADDLVPEFPPLRKKDLSRIMGTSAQSKPLDAYLLKILDATKPASGII 212          
BLAST of FC920274 vs. ExPASy Swiss-Prot
Match: COGT2_ARATH (Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT85A1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.122e-18
Identity = 66/237 (27.85%), Postives = 107/237 (45.15%), Query Frame = 2
Query:   44 LGESHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFN---------SPNPSNYPHFTFCSIQDGLSETEA-STTDFVALISVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKXXXXXXXXXXXXXXXXXXXXXXXXQKGYFPIQDSHDLEAP---------VPELPPLRMKDIP--VIETLYQETLHQFAAEAIHQMKASSGCIWN 691
            +G   +   +   ++  P P QGHINPM+++A +L+++GF +T ++T +N         S      P F F SI DGL ET+  +T D  AL       C APF++ L ++  NA +    P++C+++D    FT DVAE L                         +KG  P++D   L            +P +  +++KDIP  +  T   + +  FA     + K +S  I N
Sbjct:    1 MGSQIIHNSQKPHVVCVPYPAQGHINPMMRVAKLLHARGFYVTFVNTVYNHNRFLRSRGSNALDGLPSFRFESIADGLPETDMDATQDITALCESTMKNCLAPFRELLQRI--NAGD-NVPPVSCIVSDGCMSFTLDVAEELGVPEVLFWTTSGCAFLAYLHFYLFIEKGLCPLKDESYLTKEYLEDTVIDFIPTMKNVKLKDIPSFIRTTNPDDVMISFALRETERAKRASAIILN 234          
The following BLAST results are available for this feature:
BLAST of FC920274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CNGT2_ARATH8.443e-4042.58Cytokinin-N-glucosyltransferase 2 OS=Arabidopsis t... [more]
CNGT1_ARATH3.208e-3940.38Cytokinin-N-glucosyltransferase 1 OS=Arabidopsis t... [more]
COGT2_ARATH3.122e-1827.85Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionC32006B10EF RVDevelop1 Citrus clementina cDNA clone C32006B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920274 ID=FC920274; Name=FC920274; organism=Citrus clementina; type=EST; length=692bp
GGACACAACAGAGCAAAGCCAAAAACAAGATTCAATGGAGAACCTCGGAG
AGTCTCACATGCAACAAAAGAAAGGAAGAAGATTGATACTCTTTCCGCTG
CCTTTTCAAGGCCACATAAACCCAATGCTTCAGCTTGCAAACATTCTCTA
TTCAAAAGGCTTTTCAATCACCATAATCCACACCAAATTCAACTCCCCGA
ATCCCTCAAACTACCCTCACTTCACCTTCTGTTCAATCCAAGACGGCTTG
TCAGAAACTGAAGCCTCTACCACGGATTTTGTGGCCCTTATTTCAGTACT
GCATGTTAAGTGTGCTGCGCCATTTCAGGATTGCTTGGCCAAGTTGCTGT
CAAATGCTGAGGAGAAGGAAGAAGAGCCTATTGCTTGCTTAATCACAGAT
GCTAGTTGGTTCTTCACTCATGATGTTGCTGAAAGCCTAAAGCTCCCCAG
GATTGTGTTAAGGAGTCTCAGTGTCTCTTCCTCTCTTGTTTATGCTGCCT
TACCAGTTCTAAGCCAAAAGGGTTACTTTCCCATACAAGATTCTCATGAT
TTGGAAGCCCCAGTGCCAGAGCTTCCGCCTCTAAGAATGAAAGACATTCC
TGTCATTGAAACGCTTTATCAAGAGACACTGCATCAATTTGCAGCAGAAG
CAATCCATCAGATGAAGGCTTCCTCAGGATGCATATGGAATT
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