FC920277

Overview
NameFC920277
Unique NameFC920277
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length505
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11919 contig Ccv1_Contig11919:332..836. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920277 vs. ExPASy Swiss-Prot
Match: DFRA_MALDO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.249e-26
Identity = 66/157 (42.04%), Postives = 101/157 (64.33%), Query Frame = 2
Query:   47 GPEKEVVCVTGANGFIGTWVVRTLLEKGYTNIHAAIFPGTD---ASHLFSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPPTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFC 505
            G E E VCVTGA+GFIG+W+V  LLE GYT + A +   T+     HL  LP A + ++ +++A++ D  +   AI+GC GVFH+A+P   +  KDPE E++ P + G L++L+A +K   VR++V TSS  ++  N    Q  V DE++W+D++FC
Sbjct:    2 GSESESVCVTGASGFIGSWLVMRLLEHGYT-VRATVRDPTNQKKVKHLLDLPKA-ETHLTLWKADLADEGSFDEAIQGCSGVFHVATPMDFES-KDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTV--NVEEHQKPVYDESNWSDVEFC 153          
BLAST of FC920277 vs. ExPASy Swiss-Prot
Match: DFRA_PYRCO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.782e-26
Identity = 65/157 (41.40%), Postives = 101/157 (64.33%), Query Frame = 2
Query:   47 GPEKEVVCVTGANGFIGTWVVRTLLEKGYTNIHAAIFPGTD---ASHLFSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPPTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFC 505
            G E E VCVTGA+GFIG+W+V  LLE GYT + A +   T+     HL  LP A + ++ +++A++ D  +   AI+GC GVFH+A+P   +  +DPE E++ P + G L++L+A +K   VR++V TSS  ++  N    Q  V DE++W+D++FC
Sbjct:    2 GSESESVCVTGASGFIGSWLVMRLLEHGYT-VRATVRDPTNQKKVKHLLDLPKA-ETHLTLWKADLADEGSFDEAIQGCSGVFHVATPMDFES-RDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTV--NVEEHQKPVYDESNWSDVEFC 153          
BLAST of FC920277 vs. ExPASy Swiss-Prot
Match: DFRA_DIACA (Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.381e-25
Identity = 63/150 (42.00%), Postives = 92/150 (61.33%), Query Frame = 2
Query:   59 EVVCVTGANGFIGTWVVRTLLEKGYTNIHAAIFPGT--DASHLFSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPPTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF 502
            E VCVTGA+GFIG+W++  LLE+GYT       P       HL  LP A K N+ +++A++ +  +   A++GC GVFH+A+P   +  KDPE E++ P + G L++L++  K  +RRVV TSS  ++  N    Q  V DET W+ LDF
Sbjct:   23 ETVCVTGASGFIGSWLIMRLLERGYTVRATVRDPDNTKKVQHLLDLPNA-KTNLTLWKADLHEEGSFDAAVDGCTGVFHIATPMDFES-KDPENEMIKPTINGMLDILKSCVKAKLRRVVFTSSGGTV--NVEATQKPVYDETCWSALDF 168          
BLAST of FC920277 vs. ExPASy Swiss-Prot
Match: DFRA_MAIZE (Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 6.852e-25
Identity = 65/155 (41.94%), Postives = 96/155 (61.94%), Query Frame = 2
Query:   53 EKEVVCVTGANGFIGTWVVRTLLEKGYTNIHAAIFPGTDASH---LFSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPPTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFC 505
            EK  V VTGA+GF+G+W+V  LL+ GYT + A +    +      L  LPGAT+  + +++A++ +  +   AI GC GVFH+A+P      KDPE E++ P V+G ++++ A K+ G VRR+V TSS  ++  N    Q  V DE SWTD+DFC
Sbjct:    9 EKGTVLVTGASGFVGSWLVMKLLQAGYT-VRATVRDPANVGKTKPLMDLPGATE-RLSIWKADLAEEGSFHDAIRGCTGVFHVATPMDFLS-KDPENEVIKPTVEGMISIMRACKEAGTVRRIVFTSSAGTV--NLEERQRPVYDEESWTDVDFC 158          
BLAST of FC920277 vs. ExPASy Swiss-Prot
Match: DFRA_GERHY (Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.400e-24
Identity = 62/150 (41.33%), Postives = 94/150 (62.67%), Query Frame = 2
Query:   65 VCVTGANGFIGTWVVRTLLEKGYTNIHAAIFPGTD---ASHLFSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPPTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF 502
            VCVTGA GFIG+W+V  LLE+GY  +HA +    D     HL  LP A + N+++++A++    +   AI+GC GVFHLA+P   +  KDPE E++ P ++G L+++ +  K   V+++V TSS  ++  N    Q  V DE+ W+DLDF
Sbjct:    9 VCVTGAAGFIGSWLVMRLLERGYV-VHATVRDPGDLKKVKHLLELPKA-QTNLKLWKADLTQEGSFDEAIQGCHGVFHLATPMDFES-KDPENEIIKPTIEGVLSIIRSCVKAKTVKKLVFTSSAGTV--NGQEKQLHVYDESHWSDLDF 153          
BLAST of FC920277 vs. ExPASy Swiss-Prot
Match: DFRA_PETHY (Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 4.441e-24
Identity = 64/150 (42.67%), Postives = 96/150 (64.00%), Query Frame = 2
Query:   65 VCVTGANGFIGTWVVRTLLEKGYTNIHAAIFPGTD---ASHLFSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPPTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF 502
            VCVTGA GFIG+W+V  LLE+GY N+HA +    +     HL  LP A   N+ +++A++    +   AI+GC+GVFH+A+P   +  KDPE E++ P V+G L+++E+ AK   V+R+V TSS  ++  +    Q    D+TSW+DLDF
Sbjct:   18 VCVTGAAGFIGSWLVMRLLERGY-NVHATVRDPENKKKVKHLLELPKA-DTNLTLWKADLTVEGSFDEAIQGCQGVFHVATPMDFES-KDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSSAGTL--DVQEQQKLFYDQTSWSDLDF 162          
BLAST of FC920277 vs. ExPASy Swiss-Prot
Match: DFRA_ARATH (Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 5.800e-24
Identity = 65/153 (42.48%), Postives = 90/153 (58.82%), Query Frame = 2
Query:   53 EKEVVCVTGANGFIGTWVVRTLLEKGYTNIHAAIFPGT--DASHLFSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPPTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF 502
            +KE VCVTGA+GFIG+W+V  LLE+GY        PG      HL  LP A  L + +++A++ +  +   AI GC GVFH+A+P   +  KDPE E++ P V G L +++A  K   VRR V TSS  ++  N    Q  V DE  W+DL+F
Sbjct:    4 QKETVCVTGASGFIGSWLVMRLLERGYFVRATVRDPGNLKKVQHLLDLPNAKTL-LTLWKADLSEEGSYDDAINGCDGVFHVATPMDFES-KDPENEVIKPTVNGMLGIMKACVKAKTVRRFVFTSSAGTV--NVEEHQKNVYDENDWSDLEF 152          
BLAST of FC920277 vs. ExPASy Swiss-Prot
Match: DFRA_VITVI (Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.292e-23
Identity = 62/157 (39.49%), Postives = 98/157 (62.42%), Query Frame = 2
Query:   47 GPEKEVVCVTGANGFIGTWVVRTLLEKGYTNIHAAIFPGTD---ASHLFSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPPTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFC 505
            G + E VCVTGA+GFIG+W+V  LLE+  T + A +   T+     HL  LP A + ++ +++A++ D  +   AI+GC GVFH+A+P   +  KDPE E++ P ++G L ++++ A    VRR+V TSS  ++  N    Q  V DE+ W+D++FC
Sbjct:    2 GSQSETVCVTGASGFIGSWLVMRLLERRLT-VRATVRDPTNVKKVKHLLDLPKA-ETHLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFES-KDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTV--NIQEHQLPVYDESCWSDMEFC 153          
BLAST of FC920277 vs. ExPASy Swiss-Prot
Match: DFRA_SOLLC (Dihydroflavonol-4-reductase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.204e-23
Identity = 64/155 (41.29%), Postives = 96/155 (61.94%), Query Frame = 2
Query:   50 PEKEVVCVTGANGFIGTWVVRTLLEKGYTNIHAAIFPGTD---ASHLFSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPPTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF 502
            P+   V VTG  GFIG+W+V  LLE+GY N+HA +    +     HL  LP A   N+ +++A++    +   AI+GC+GVFH+A+P   +  KDPE E++ P V+G L+++E+ AK   V+R+V TSS  ++  +    Q    DETSW+DLDF
Sbjct:   15 PKTTTVWVTGGAGFIGSWLVMRLLERGY-NVHATVRDPENQKKVKHLLELPKA-DTNLTLWKADLAVEGSFDEAIQGCQGVFHVATPMDFES-KDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSSAGTL--DVQEDQKLFYDETSWSDLDF 164          
BLAST of FC920277 vs. ExPASy Swiss-Prot
Match: DFRA_CALCH (Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.879e-23
Identity = 62/149 (41.61%), Postives = 91/149 (61.07%), Query Frame = 2
Query:   65 VCVTGANGFIGTWVVRTLLEKGYTNIHAAIFPG--TDASHLFSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPPTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF 502
            VCVTGA GFIG+W+V  LLE+GY        PG      HL  LP A + N+ +++A++    +   AIEGC GVFH+A+P   +  KDPE E++ P ++G L+++ + AK   V+++V TSS  ++  N    Q  V DE+ W+DLDF
Sbjct:    9 VCVTGAAGFIGSWLVMRLLERGYIVRATVRNPGDMKKVKHLLELPKA-ETNLTLWKADLTQEGSFDEAIEGCHGVFHVATPMDFES-KDPENEIIKPTIEGILSIIRSCAKAKTVKKLVYTSSAGTV--NVQETQLPVYDESHWSDLDF 153          
The following BLAST results are available for this feature:
BLAST of FC920277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
DFRA_MALDO1.249e-2642.04Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_PYRCO2.782e-2641.40Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_DIACA1.381e-2542.00Dihydroflavonol-4-reductase OS=Dianthus caryophyll... [more]
DFRA_MAIZE6.852e-2541.94Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3... [more]
DFRA_GERHY3.400e-2441.33Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=... [more]
DFRA_PETHY4.441e-2442.67Dihydroflavonol-4-reductase OS=Petunia hybrida GN=... [more]
DFRA_ARATH5.800e-2442.48Dihydroflavonol-4-reductase OS=Arabidopsis thalian... [more]
DFRA_VITVI1.292e-2339.49Dihydroflavonol-4-reductase OS=Vitis vinifera GN=D... [more]
DFRA_SOLLC2.204e-2341.29Dihydroflavonol-4-reductase OS=Solanum lycopersicu... [more]
DFRA_CALCH2.879e-2341.61Dihydroflavonol-4-reductase OS=Callistephus chinen... [more]

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Properties
Property NameValue
Genbank descriptionC32006C01EF RVDevelop1 Citrus clementina cDNA clone C32006C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920277 ID=FC920277; Name=FC920277; organism=Citrus clementina; type=EST; length=505bp
GACACTTCACAAAATCGTCACATAATTAAAGAGAAAAAGGATGAACGGGC
CAGAAAAGGAAGTAGTTTGCGTGACTGGAGCCAACGGGTTCATCGGAACA
TGGGTGGTCCGAACCCTTCTAGAAAAAGGCTACACCAACATTCACGCTGC
CATCTTTCCCGGCACTGACGCATCCCACTTGTTCAGCCTCCCAGGCGCCA
CCAAGCTCAACGTCCGTGTTTACGAGGCCAATATCTTAGACAACGAAGCA
ATTTCCAGGGCCATCGAGGGTTGCAAGGGGGTCTTCCATCTTGCCTCTCC
TCCCACCCTGGATGATCCCAAGGACCCCGAAAAGGAGCTGCTCATTCCTG
CTGTTCAAGGCACCCTCAATGTCTTAGAGGCTGCCAAGAAGTTTGGTGTC
AGGCGTGTGGTGCTCACCAGCTCCATTTCTTCCATTGTGCCTAATCCCAA
TTGGCCTCAAGGCAAGGTCATTGATGAAACTTCTTGGACCGACCTTGACT
TTTGC
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