FC920284

Overview
NameFC920284
Unique NameFC920284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length577
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14170 contig Ccv1_Contig14170:13..589. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920284 vs. ExPASy Swiss-Prot
Match: GDL57_ARATH (GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana GN=At3g48460 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 4.492e-56
Identity = 110/177 (62.15%), Postives = 131/177 (74.01%), Query Frame = 1
Query:   70 LFSAL-TAATNTLTPRPFNKIYAFGDSFTDTGNTKTATGPSGFGHVSTSPYGSTYFHHPTNRYSDGRLVIDFVTQSLSLPFLPPYLHNK-DNA------TYGVNFAVGGATAVNHAFFVKNNLSLDITPQSIQTHLIWFNKFLESKGCKEAQSSGPQCQAAFDDALFWVGETGVNDY 576
            LFS + TAAT     RPFNKIYAFGDSFTDTGN+++  GP+GFGH+S+ PYG T+F  PTNRYSDGRL IDFV +S++LPFLPPYL  K  NA      T+GVNFAV G+T + HAFFVKNNLSLD+TPQSI+T L WF K+LE+ G  +  S        F D+LFW+GE GVNDY
Sbjct:   19 LFSTISTAATIPNIHRPFNKIYAFGDSFTDTGNSRSGEGPAGFGHLSSPPYGMTFFRRPTNRYSDGRLTIDFVAESMNLPFLPPYLSLKTTNANGTATDTHGVNFAVSGSTVIKHAFFVKNNLSLDMTPQSIETELAWFEKYLETLGTNQKVS-------LFKDSLFWIGEIGVNDY 188          
BLAST of FC920284 vs. ExPASy Swiss-Prot
Match: GDL11_ARATH (GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana GN=At1g28650 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.569e-27
Identity = 66/174 (37.93%), Postives = 97/174 (55.75%), Query Frame = 1
Query:   58 LLPSLFSALTAATNTLTPRPFNKIYAFGDSFTDTGNTKTATGPSGFGHVSTSPYGSTYFHHPTNRYSDGRLVIDFVTQSLSLPFLPPYLHNKD-NATYGVNFAVGGATAVNHAFFVKNNLSLDITPQSIQTHLIWFNKFLESKGCKEAQSSGPQCQAAFDDALFWVGETGVNDY 576
            LL   ++ +  A++    R +  I +FGDS  DTGN    +  +     +  PYG ++FH P+ RYSDGRLVIDF+ + L LP++PPY  +++ +   G+NFAV GATA++ AF VK  +  D T  S+   L  F + L +       SS   C+    D+L  +GE G NDY
Sbjct:   15 LLILYYTTIVVASSESRCRRYKSIISFGDSIADTGNYVHLSNVNNLPQAAFLPYGESFFHPPSGRYSDGRLVIDFIAEFLGLPYVPPYFGSQNVSFNQGINFAVYGATALDRAFLVKQGIKSDFTNISLSVQLNTFKQILPNL----CASSTRDCREMLGDSLILMGEIGGNDY 184          
BLAST of FC920284 vs. ExPASy Swiss-Prot
Match: GDL7_ARATH (GDSL esterase/lipase At1g28580 OS=Arabidopsis thaliana GN=At1g28580 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.382e-27
Identity = 69/179 (38.55%), Postives = 97/179 (54.19%), Query Frame = 1
Query:   46 LMFVLLPSLFSALTAATNTLTPRPFNKIYAFGDSFTDTGNTKTATGPSGFGHVSTSPYGSTYFHHPTNRYSDGRLVIDFVTQSLSLPFLPPYLHNKDNATY--GVNFAVGGATAVNHAFFVKNNLSLDITPQSIQTHLIWFNKFLESKGCKEAQSSGPQCQAAFDDALFWVGETGVNDY 576
            L+F+ L +    +T  ++    R F  I +FGDS  DTGN    + P    H++  PYG  +FHHPT R+S+GRL+IDF+ + L LP +PP+ +   NA +  GVNFAVGGATA+  +F     +    T  S+   L   N F ES        S   C+   ++AL  +GE G NDY
Sbjct:   13 LVFIFLSTF--VVTNVSSETKCREFKSIISFGDSIADTGNLLGLSDPKDLPHMAFPPYGENFFHHPTGRFSNGRLIIDFIAEFLGLPLVPPF-YGSHNANFEKGVNFAVGGATALERSFLEDRGIHFPYTNVSLGVQL---NSFKES--LPSICGSPSDCRDMIENALILMGEIGGNDY 183          
BLAST of FC920284 vs. ExPASy Swiss-Prot
Match: GDL6_ARATH (GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana GN=At1g28570 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.840e-26
Identity = 69/183 (37.70%), Postives = 98/183 (53.55%), Query Frame = 1
Query:   49 MFVLLPSLFSAL-TAATNTLTPRP----FNKIYAFGDSFTDTGNTKTATGPSGFGHVSTSPYGSTYFHHPTNRYSDGRLVIDFVTQSLSLPFLPPYLHNKDNATY--GVNFAVGGATAVNHAFFVKNNLSLDITPQSIQTHLIWFNKFLESKGCKEAQSSGPQCQAAFDDALFWVGETGVNDY 576
            +F+ L S F  L T    T+   P    F  I +FGDS  DTGN    + P+    V+  PYG T+FHHPT R+S+GRL+IDF+ + L  P +PP+ +   NA +  GVNFAVGGATA+  +F  +  +    T  S+   L  F + L +        S   C+   +++L  +GE G NDY
Sbjct:    4 LFMKLVSFFLILSTFCLTTVNSEPQCHNFKSIISFGDSIADTGNLLALSDPTNLPKVAFLPYGETFFHHPTGRFSNGRLIIDFIAEFLGFPLVPPF-YGSQNANFEKGVNFAVGGATALERSFLEERGIHFPYTNVSLAVQLSSFKESLPN-----LCVSPSDCRDMIENSLILMGEIGGNDY 180          
BLAST of FC920284 vs. ExPASy Swiss-Prot
Match: GDL40_ARATH (GDSL esterase/lipase At2g27360 OS=Arabidopsis thaliana GN=At2g27360 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.840e-26
Identity = 64/166 (38.55%), Postives = 91/166 (54.82%), Query Frame = 1
Query:   82 LTAATNTLTPRPFNKIYAFGDSFTDTGNTKTATGPSGFGHVSTSPYGSTYFHHPTNRYSDGRLVIDFVTQSLSLPFLPPYLHNKD-NATYGVNFAVGGATAVNHAFFVKNNLSLDITPQSIQTHLIWFNKFLESKGCKEAQSSGPQCQAAFDDALFWVGETGVNDY 576
            +T  T+    R F  I +FGDS TDTGN    + P+     +  PYG T+FHHP+ R+SDGRL+IDF+ + L +P +PP+  +K+ N   GVNFAVGGATA+  +   +       +  S+   L  F + L         SS P C+   ++A   +GE G NDY
Sbjct:   19 ITVVTSQTRCRNFKSIISFGDSITDTGNLLGLSSPNDLPESAFPPYGETFFHHPSGRFSDGRLIIDFIAEFLGIPHVPPFYGSKNGNFEKGVNFAVGGATALECSVLEEKGTHCSQSNISLGNQLKSFKESLPYL----CGSSSPDCRDMIENAFILIGEIGGNDY 180          
BLAST of FC920284 vs. ExPASy Swiss-Prot
Match: GDL8_ARATH (GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana GN=At1g28590 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 6.327e-26
Identity = 68/172 (39.53%), Postives = 94/172 (54.65%), Query Frame = 1
Query:   70 LFSALTAATNTLTP-RPFNKIYAFGDSFTDTGNTKTATGPSGFGHVSTSPYGSTYFHHPTNRYSDGRLVIDFVTQSLSLPFLPPYLHNKDNATY--GVNFAVGGATAVNHAFFVKNNLSLDITPQSIQTHLIWFNKFLESKGCKEAQSSGPQCQAAFDDALFWVGETGVNDY 576
            L + L  + N+ T  R F  I +FGDS  DTGN    + P+     +  PYG T+FHHPT RYSDGRL+IDF+ + L  P +PP+ +   NA +  GVNFAV GATA+  +F  +  +   IT  S+   L  F + L +        S   C+   ++AL  +GE G NDY
Sbjct:   17 LSTLLVTSVNSQTQCRNFKSIISFGDSIADTGNLLGLSDPNDLPASAFPPYGETFFHHPTGRYSDGRLIIDFIAEFLGFPLVPPF-YGCQNANFKKGVNFAVAGATALEPSFLEERGIHSTITNVSLSVQLRSFTESLPN-----LCGSPSDCRDMIENALILMGEIGGNDY 182          
BLAST of FC920284 vs. ExPASy Swiss-Prot
Match: GDL91_ARATH (GDSL esterase/lipase At1g28640 OS=Arabidopsis thaliana GN=At1g28640 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.101e-25
Identity = 64/174 (36.78%), Postives = 94/174 (54.02%), Query Frame = 1
Query:   58 LLPSLFSALTAATNTLTPRPFNKIYAFGDSFTDTGNTKTATGPSGFGHVSTSPYGSTYFHHPTNRYSDGRLVIDFVTQSLSLPFLPPYLHNKD-NATYGVNFAVGGATAVNHAFFVKNNLSLDITPQSIQTHLIWFNKFLESKGCKEAQSSGPQCQAAFDDALFWVGETGVNDY 576
            LL    + +  A++    R F  I +FGDS  DTGN    +  +     +  PYG ++FH P+ RYSDGRL+IDF+ + L LP++P Y  +++ +   G+NFAV GATA++  F V   +  D T  S+   L  F + L +       SS   C+    D+L  +GE GVNDY
Sbjct:   13 LLVLYSTTIIVASSESRCRRFKSIISFGDSIADTGNYLHLSDVNHLPQSAFLPYGESFFHPPSGRYSDGRLIIDFIAEFLGLPYVPSYFGSQNVSFDQGINFAVYGATALDRVFLVGKGIESDFTNVSLSVQLNIFKQILPNL----CTSSSRDCREMLGDSLILMGEIGVNDY 182          
BLAST of FC920284 vs. ExPASy Swiss-Prot
Match: GDL83_ARATH (GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana GN=At5g45910 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.356e-25
Identity = 73/189 (38.62%), Postives = 108/189 (57.14%), Query Frame = 1
Query:   37 QIFLMFVLLPSLFSALTAATNTLTPRP---FNKIYAFGDSFTDTGNTKTATGPSGFGHVSTSPYGSTYFHHPTNRYSDGRLVIDFVTQSLSLPFLPPYLHN---KDNATY--GVNFAVGGATAVNHAFFVKNNLSLD-ITPQSIQTHLIWFNKFLESKGCKEAQSSGPQCQAAFDDALFWVGETGVNDY 576
            +I ++F++    FS L +   +L  RP   +  I+ FGDS +DTGN    +G     ++   PYG T+F+  T R SDGRL+IDF+ ++  LP++PPYL +    D+  +  G NFAV GATA   +FF    LS+  +T +++   L WF K L+   CK    + P+C+  F  +LF VGE G NDY
Sbjct:    2 RINMLFIVA---FSFLVSV-RSLPMRPTLKYESIFNFGDSLSDTGNF-LLSGDVDSPNIGRLPYGQTFFNRSTGRCSDGRLIIDFIAEASGLPYIPPYLQSLRTNDSVDFKRGANFAVAGATANEFSFFKNRGLSVTLLTNKTLDIQLDWFKK-LKPSLCK----TKPECEQYFRKSLFLVGEIGGNDY 180          
BLAST of FC920284 vs. ExPASy Swiss-Prot
Match: GDL12_ARATH (GDSL esterase/lipase At1g28660 OS=Arabidopsis thaliana GN=At1g28660 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 9.136e-25
Identity = 63/174 (36.21%), Postives = 95/174 (54.60%), Query Frame = 1
Query:   58 LLPSLFSALTAATNTLTPRPFNKIYAFGDSFTDTGNTKTATGPSGFGHVSTSPYGSTYFHHPTNRYSDGRLVIDFVTQSLSLPFLPPYLHNKD-NATYGVNFAVGGATAVNHAFFVKNNLSLDITPQSIQTHLIWFNKFLESKGCKEAQSSGPQCQAAFDDALFWVGETGVNDY 576
            LL    + +  A++    R F  I +FGDS  DTGN    +  +     +  PYG ++FH P+ R SDGRL+IDF+ + L LP++PPY  +++ +   G+NFAV GATA++ A+FV   +  D T  S+   L  F + L +       SS   C+    D+L  +GE G ND+
Sbjct:   13 LLVLYSTTIIVASSESRCRRFTSIISFGDSIADTGNILHLSDVNHLPQTAFFPYGESFFHPPSGRASDGRLIIDFIAEFLGLPYVPPYFGSQNVSFEQGINFAVYGATALDRAYFVAKGIESDFTNVSLGVQLDIFKQILPNL----CASSSRDCREMLGDSLILMGEIGGNDF 182          
BLAST of FC920284 vs. ExPASy Swiss-Prot
Match: GDL13_ARATH (GDSL esterase/lipase At1g28670 OS=Arabidopsis thaliana GN=At1g28670 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.319e-23
Identity = 62/174 (35.63%), Postives = 94/174 (54.02%), Query Frame = 1
Query:   58 LLPSLFSALTAATNTLTPRPFNKIYAFGDSFTDTGNTKTATGPSGFGHVSTSPYGSTYFHHPTNRYSDGRLVIDFVTQSLSLPFLPPYLHNKD-NATYGVNFAVGGATAVNHAFFVKNNLSLDITPQSIQTHLIWFNKFLESKGCKEAQSSGPQCQAAFDDALFWVGETGVNDY 576
            LL    + +  A++    R F  I +FGDS  DTGN    +  +     +  PYG ++FH P+ R S+GRL+IDF+ + L LP++PPY  +++ +   G+NFAV GATA++ AF +   +  D T  S+   L  F + L +       SS   C+    D+L  +GE G NDY
Sbjct:   13 LLVLYSTTIIVASSESRCRRFKSIISFGDSIADTGNYLHLSDVNHLPQSAFLPYGESFFHPPSGRASNGRLIIDFIAEFLGLPYVPPYFGSQNVSFEQGINFAVYGATALDRAFLLGKGIESDFTNVSLSVQLDTFKQILPNL----CASSTRDCKEMLGDSLILMGEIGGNDY 182          
The following BLAST results are available for this feature:
BLAST of FC920284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
GDL57_ARATH4.492e-5662.15GDSL esterase/lipase At3g48460 OS=Arabidopsis thal... [more]
GDL11_ARATH2.569e-2737.93GDSL esterase/lipase At1g28650 OS=Arabidopsis thal... [more]
GDL7_ARATH4.382e-2738.55GDSL esterase/lipase At1g28580 OS=Arabidopsis thal... [more]
GDL6_ARATH2.840e-2637.70GDSL esterase/lipase At1g28570 OS=Arabidopsis thal... [more]
GDL40_ARATH2.840e-2638.55GDSL esterase/lipase At2g27360 OS=Arabidopsis thal... [more]
GDL8_ARATH6.327e-2639.53GDSL esterase/lipase At1g28590 OS=Arabidopsis thal... [more]
GDL91_ARATH4.101e-2536.78GDSL esterase/lipase At1g28640 OS=Arabidopsis thal... [more]
GDL83_ARATH5.356e-2538.62GDSL esterase/lipase At5g45910 OS=Arabidopsis thal... [more]
GDL12_ARATH9.136e-2536.21GDSL esterase/lipase At1g28660 OS=Arabidopsis thal... [more]
GDL13_ARATH1.319e-2335.63GDSL esterase/lipase At1g28670 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC32006C10EF RVDevelop1 Citrus clementina cDNA clone C32006C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920284 ID=FC920284; Name=FC920284; organism=Citrus clementina; type=EST; length=577bp
GAGACAATGGCTCATTCCTTCGGAGTTTTTTCCTCCCAAATTTTCCTCAT
GTTCGTACTCTTACCCTCCCTGTTTTCTGCCCTTACCGCTGCAACCAACA
CATTAACCCCACGTCCATTTAATAAGATCTATGCCTTCGGTGACTCATTC
ACCGACACTGGTAACACCAAGACTGCGACTGGCCCTAGTGGCTTTGGCCA
TGTCTCCACCTCTCCATACGGCAGCACATATTTCCACCACCCCACCAACC
GATACTCCGATGGACGGCTGGTGATTGACTTTGTAACTCAATCCCTGTCA
CTACCATTCTTGCCACCTTACCTTCACAACAAAGATAATGCAACATATGG
TGTCAACTTTGCTGTTGGCGGTGCCACTGCTGTAAATCATGCTTTCTTTG
TCAAAAACAATCTCAGTCTTGACATTACTCCTCAGTCAATCCAAACTCAT
CTCATTTGGTTCAACAAGTTCTTGGAGAGCAAGGGATGTAAAGAAGCACA
GTCCTCAGGGCCTCAGTGCCAGGCAGCTTTCGATGATGCATTGTTCTGGG
TTGGTGAAACTGGAGTCAACGATTATG
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