FC920356

Overview
NameFC920356
Unique NameFC920356
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig8083 contig Ccv1_Contig8083:80..804. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920356 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.751e-42
Identity = 92/240 (38.33%), Postives = 132/240 (55.00%), Query Frame = 1
Query:    1 TIMSLESYDRAKEVKRFDEPXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDVVPTIDLSGVDSDDL-RPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENAKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTLLEGRMMVGHYYPYCPQPDLTVGITSHTD 717
            ++  + + DR+  +K FDE             T IP  F  PPATL   +P S +      +PTIDL G  +D + R ++VEKI  A+ + GFFQV+NHGI ++VLE+M+  I+ FHEQ  E+K   Y R+ A  + Y SN DLF S AA+WRDTL        P  E++P  C +  +E++  V +                T+ LK+       +++GHYYP CPQPDLT+G+T H+D
Sbjct:    4 SLPQVAALDRSTLLKAFDETKTGVKGLIDAGITEIPSIFRAPPATLTSPKPPSSS---DFSIPTIDLKGGGTDSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSRDPASKMVYSSNFDLFSSPAANWRDTLGCYTAPDPPRPEDLPATCGEMMIEYSKEVMKLGKLLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSD 240          
BLAST of FC920356 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.402e-40
Identity = 83/234 (35.47%), Postives = 127/234 (54.27%), Query Frame = 1
Query:   22 YDRAKEVKRFDEPXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDVVPTIDLSGVDSDDL--RPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENAKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTLLEGRMMVGHYYPYCPQPDLTVGITSHTD 717
            +DRA E+K FDE             + +PR F HP   L+  +P          +PTIDL G D  D   R   +E+I  A+ + GFFQV+NHG+ +E+LE+M + ++ FHEQ  E++   Y R+ ++   Y+SN DLF S AA+WRDT    +    P+ +++PEICR   +E++  V                 + + L +    +G +M+ HYYP CP+PDLT+G + H+D
Sbjct:   10 FDRASELKAFDETKTGVKGLVDSGVSQVPRIFHHPTVKLSTPKPLPSDLLHLKTIPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYLSNFDLFSSPAANWRDTFSCTMAPDTPKPQDLPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDMDCSKGLLMLSHYYPPCPEPDLTLGTSQHSD 243          
BLAST of FC920356 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.137e-40
Identity = 86/235 (36.60%), Postives = 126/235 (53.62%), Query Frame = 1
Query:   19 SYDRAKEVKRFDEPXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDVVPTIDLSGVDSDDL--RPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENAKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTLLEGRMMVGHYYPYCPQPDLTVGITSHTD 717
            S+DRA E+K FDE             + IPR F H    LA+ +P          +PTIDL G D  D       +E I  A+ + GFFQV+NHG+ +E+LE+M   ++ FHEQPPE++  +Y R+  +   Y+SN DL+ + AA+WRDT    +    PE +++PEICR   +E++  V                   + LK+   L+G  M+ HY+P CP+PDLT G + H+D
Sbjct:    9 SFDRASELKAFDETKTGVKGLVDSGISKIPRIFHHSSVELANPKPLPSDLLHLKTIPTIDLGGRDFQDAIKHKNAIEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYSRDFGRKFIYLSNFDLYTAAAANWRDTFYCYMAPDPPEPQDLPEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDMECLKGLRMLCHYFPPCPEPDLTFGTSKHSD 243          
BLAST of FC920356 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.557e-39
Identity = 84/235 (35.74%), Postives = 130/235 (55.32%), Query Frame = 1
Query:   16 ESYDRAKEVKRFDEPXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDVVPTIDLSGV-DSDDLRPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENAKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTLLEGRMMVGHYYPYCPQPDLTVGITSHTD 717
            E+YDRA E+K FDE             T +PR F +P   +A+ +P S       ++PTIDL GV +S  +R ++V K+  A  + GFFQ +NHG+ ++V+E+M+  I+ FH+Q PE++   Y R+  K + Y SN DL+ S AASWRDTL   +    P+ +++PE+C +  +E++  V +                 + LKE    +G  M+ H +P CP+P+ T G   HTD
Sbjct:    3 ENYDRASELKAFDEMKIGVKGLVDAGVTKVPRIFHNPHVNVANPKPTSTVV----MIPTIDLGGVFESTVVRESVVAKVKDAMEKFGFFQAINHGVPLDVMEKMINGIRRFHDQDPEVRKMFYTRDKTKKLKYHSNADLYESPAASWRDTLSCVMAPDVPKAQDLPEVCGEIMLEYSKEVMKLAELMFEILSEALGLSPNHLKEMDCAKGLWMLCHCFPPCPEPNRTFGGAQHTD 233          
BLAST of FC920356 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 8.542e-38
Identity = 87/241 (36.10%), Postives = 134/241 (55.60%), Query Frame = 1
Query:   10 SLESYDRAKEVKRFDEPXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDV-VPTIDLSGVDSD-DLRPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENA-KGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTLLEGRMMVGHYYPYCPQPDLTVGITSHTDPG 723
            +L   +  +E+K FDE             T IPR FI  P  L  +   S  R  SD+ +P I+L+G+ S+ ++R  IVEKI  AS + GFFQ+VNHGI  +V+++MV  ++ FHEQ  +IK   Y R+   K   Y SN  L    A +WRDT++  +   +P+ +E P++CR   ++++++V+                K + L+E    EG +++GHYYP CPQP+LT G + H+D G
Sbjct:   35 TLSEEESLRELKAFDETKAGVKGIVDTGITKIPRIFIDQPKNLDRI---SVCRGKSDIKIPVINLNGLSSNSEIRREIVEKIGEASEKYGFFQIVNHGIPQDVMDKMVDGVRKFHEQDDQIKRQYYSRDRFNKNFLYSSNYVLIPGIACNWRDTMECIMNSNQPDPQEFPDVCRDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLILLGHYYPACPQPELTFGTSKHSDSG 272          
BLAST of FC920356 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.769e-35
Identity = 86/239 (35.98%), Postives = 122/239 (51.05%), Query Frame = 1
Query:   16 ESYDRAKEVKRFDEPXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDVVPTIDLSGVDSDDLR-PTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENAKGVSYISNIDLFHSK--AASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTLLEGRMMVGHYYPYCPQPDLTVGITSHTDPG 723
            ESYD+  E+K FD+             T +P+ F+ PP      + ++K      V P IDL G+D D ++   IV+K+  AS + GFFQVVNHGI   VL+R ++  + F EQ  E+K   Y R+ AK V Y SN+DL+ S   AASWRDT+   +    P L+E P  C +  ++++  VK+                   LK+           +YYP CPQP+LT+G   HTD G
Sbjct:    8 ESYDKMSELKAFDDTKAGVKGLVDSGITKVPQIFVLPP------KDRAKKCETHFVFPVIDLQGIDEDPIKHKEIVDKVRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKVVYTSNLDLYKSSVPAASWRDTIFCYMAPNPPSLQEFPTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKDYMDCFHLFCSCNYYPPCPQPELTMGTIQHTDIG 240          
BLAST of FC920356 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.492e-15
Identity = 58/203 (28.57%), Postives = 90/203 (44.33%), Query Frame = 1
Query:  142 DLRPKSKTRPVSDVVPTIDLSGVDSD--DLRPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENAKGVSYISNIDLFHSKAASWRDTLQIRLGLTEP-------ELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTLLEGRMMVGHYYPYCPQPDLTVGITSHTDPG 723
            D RPK      SD +P I L+G+D D  D R  I  KI  A  + G FQVV+HGI ++++  M R  + F   P E K         KG   +S+    H +  + +D  +I    + P          + PE  R     ++  +                 + + L +  +   + ++ +YYP CPQP+LT+G+  HTDPG
Sbjct:   24 DERPKIAYNKFSDEIPVISLAGIDDDSVDKRSQICRKIVEACEDWGIFQVVDHGIDIDLISEMTRLARQFFALPAEEKLRFDMTGGKKGGFIVSS----HLQGEAVQDWREIVTYFSYPIQARDYSRWPDKPEGWRSITEMYSDELMALACKLLEVLSEAMGLEKEGLTKACVDMDQKVIVNYYPKCPQPNLTLGLKRHTDPG 222          
BLAST of FC920356 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.957e-15
Identity = 59/202 (29.21%), Postives = 87/202 (43.07%), Query Frame = 1
Query:  142 DLRPKSKTRPVSDVVPTIDLSGVDS-DDLRPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENAKGVSYISNIDLFHSKAASWRDTLQIRLGLTEP-------ELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTLLEGRMMVGHYYPYCPQPDLTVGITSHTDPG 723
            D RPK      SD +P I L+G+D  D  R  I  +I  A    G FQVV+HG+   ++  M R  + F   PPE K         KG   +S+    H +  + +D  +I    + P          + PE   K   E++  +                 + + L    +   + +V +YYP CPQPDLT+G+  HTDPG
Sbjct:   24 DERPKVAYNVFSDEIPVISLAGIDDVDGKRGEICRQIVEACENWGIFQVVDHGVDTNLVADMTRLARDFFALPPEDKLRFDMSGGKKGGFIVSS----HLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPEGWVKVTEEYSERLMSLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPG 221          
BLAST of FC920356 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.327e-14
Identity = 62/198 (31.31%), Postives = 89/198 (44.95%), Query Frame = 1
Query:  166 RPVSDVVPTIDLSGVDSDDLRPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENAKGV-SYISNIDLFHSKAASWRDTLQIRL-----------GLTEPELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKT--LLEGRMMVGHYYPYCPQPDLTVGITSHTD 717
            R  +  +P +DLS  D + +R  +V+    AS E G FQVVNHGI  E++ R+    + F E P   K  V + E++K +  Y + +        +W D L  R+               PE  EV E       E+  HVK+               K D LKE     +   MM  +YYP CP+PDL +G+ +HTD
Sbjct:   37 RGPTPAIPVVDLSDPDEESVRRAVVK----ASEEWGLFQVVNHGIPTELIRRLQDVGRKFFELPSSEKESVAKPEDSKDIEGYGTKLQKDPEGKKAWVDHLFHRIWPPSCVNYRFWPKNPPEYREVNE-------EYAVHVKKLSETLLGILSDGLGLKRDALKEGLGGEMAEYMMKINYYPPCPRPDLALGVPAHTD 223          
BLAST of FC920356 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.327e-14
Identity = 58/202 (28.71%), Postives = 87/202 (43.07%), Query Frame = 1
Query:  142 DLRPKSKTRPVSDVVPTIDLSGVDS-DDLRPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENAKGVSYISNIDLFHSKAASWRDTLQIRLGLTEP-------ELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTLLEGRMMVGHYYPYCPQPDLTVGITSHTDPG 723
            D RPK      SD +P I L+G+D  D  R  I  +I  A    G FQVV+HG+   ++  M R  + F   PPE K         KG   +S+    H +  + +D  +I    + P          + P+   K   E++  +                 + + L    +   + +V +YYP CPQPDLT+G+  HTDPG
Sbjct:   23 DERPKVAYNEFSDEIPVISLAGIDDVDGKRGEICREIVEACENWGIFQVVDHGVDTSLVADMTRLARDFFALPPEEKLRFDMSGGKKGGFIVSS----HLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPQGWAKVTEEYSEKLMGLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPG 220          
The following BLAST results are available for this feature:
BLAST of FC920356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
ACCH1_ARATH9.751e-4238.331-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH3_ARATH2.402e-4035.471-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH2_ARATH3.137e-4036.601-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
GSL_ARATH1.557e-3935.74Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
DV4H_CATRO8.542e-3836.10Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
ACCH3_SOLLC6.769e-3535.981-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FL3H_PETCR3.492e-1528.57Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
FL3H_ARATH5.957e-1529.21Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
FLS1_ARATH1.327e-1431.31Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
FL3H_MATIN1.327e-1428.71Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]

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Properties
Property NameValue
Genbank descriptionC32007C05EF RVDevelop1 Citrus clementina cDNA clone C32007C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920356 ID=FC920356; Name=FC920356; organism=Citrus clementina; type=EST; length=725bp
ACAATCATGAGCCTAGAATCATACGACAGGGCCAAAGAAGTGAAACGATT
CGACGAGCCCAAAGTCGGGGTCAAAGGTTTAGTTGACTTGGGCGTCACCG
CCATCCCCCGCTTTTTCATCCACCCACCCGCCACTCTTGCCGATCTCAGA
CCCAAGTCAAAGACCCGGCCCGTCTCTGATGTAGTCCCCACCATCGATTT
ATCGGGCGTTGACTCGGACGATCTGCGGCCGACGATTGTGGAAAAGATAG
CATGTGCCTCGCGGGAGCTGGGGTTCTTTCAGGTTGTGAATCACGGCATC
GGAGTTGAGGTCTTGGAGCGTATGGTTCGGGCCATTAAAGGGTTTCATGA
ACAGCCGCCGGAGATCAAGGCGCCGGTGTATCGTAGGGAGAACGCCAAAG
GCGTGTCTTACATTTCCAACATCGATTTGTTTCACTCTAAAGCTGCCAGC
TGGAGGGACACACTGCAGATAAGGCTAGGTCTGACGGAACCAGAGCTTGA
AGAAGTTCCTGAAATATGTAGGAAAGAGGCAGTCGAGTGGAACCACCATG
TAAAACAGCTCGGAGAGCTTTTGTTTGGGCTGCTGTGTGAAGGTTTGGGG
TTGAAAACCGATAGGTTGAAGGAAAAGACCCTTCTGGAAGGGAGGATGAT
GGTGGGCCATTATTATCCCTACTGTCCGCAGCCTGATCTGACAGTGGGGA
TCACATCTCATACTGATCCAGGCCA
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