FC920445
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920445 vs. ExPASy Swiss-Prot
Match: CMT3_ARATH (DNA (cytosine-5)-methyltransferase CMT3 OS=Arabidopsis thaliana GN=CMT3 PE=1 SV=2) HSP 1 Score: 295.434 bits (755), Expect = 1.859e-79 Identity = 140/202 (69.31%), Postives = 167/202 (82.67%), Query Frame = 1 Query: 85 KILKICYGDPKEIKKRGLYLKIRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTRGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAY 690 KI+ I +G PK++ KRGLYLK+RW NY S DTWEPIEGLSNC KI+EFV G+KS ILPLPG VDV+CGGPPCQG+SG NRFRN +PL D+KNKQL+V+M+IV++LKPKFVLMENVVD++K AKG L R+A+ RL+QMNYQVR GMMAAGAYGL QFR+R FLWGA P+E +P + LPTHD+V RG I EF+ N VAY Sbjct: 386 KIVGISFGVPKKLLKRGLYLKVRWLNYDDSHDTWEPIEGLSNCRGKIEEFVKLGYKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEYLKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRLRFFLWGALPSEIIPQFPLPTHDLVHRGNIVKEFQGNIVAY 587
BLAST of FC920445 vs. ExPASy Swiss-Prot
Match: CMT1_MAIZE (DNA (cytosine-5)-methyltransferase 1 OS=Zea mays GN=MET2A PE=1 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 1.740e-77 Identity = 133/202 (65.84%), Postives = 160/202 (79.21%), Query Frame = 1 Query: 85 KILKICYGDPKEIKKRGLYLKIRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTRGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAY 690 K++ ICYG ++ G+Y K++W YGP EDTWEPI+ LS+C +KI+EFV G K KILPLPGDVDVICGGPPCQG+SGFNR+RN+D PL DEKNKQ++ FMDIV +LKPK+VLMENVVDI+KFA G LG+YAL+ L+ M YQ R+GMM AG YGLPQFRMRVFLWGA + LP Y LPT+DVV+RG P F + VAY Sbjct: 445 KLVGICYGGSD--RENGIYFKVQWEGYGPEEDTWEPIDNLSDCPQKIREFVQEGHKRKILPLPGDVDVICGGPPCQGISGFNRYRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAY 644
BLAST of FC920445 vs. ExPASy Swiss-Prot
Match: CMT2_ARATH (DNA (cytosine-5)-methyltransferase CMT2 OS=Arabidopsis thaliana GN=CMT2 PE=2 SV=2) HSP 1 Score: 284.263 bits (726), Expect = 4.286e-76 Identity = 130/202 (64.36%), Postives = 159/202 (78.71%), Query Frame = 1 Query: 85 KILKICYGDPKEIKKRGLYLKIRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTRGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAY 690 K++ IC+GD + K GL K+ W+ Y EDTWE E LSNC + I+EFVT GFKSKILPLPG V VICGGPPCQG+SG+NR RN D+PL DE+N+Q+IVFMDIV++LKP +VLMENVVDI++ KG LGRYAL+RL+ M YQ R+G+M AG YGL QFR RVF+WGA P + LPP+ LPTHDV++R +P EFERN VAY Sbjct: 790 KLVDICFGDHDKTGKNGLKFKVHWKGYRSDEDTWELAEELSNCQDAIREFVTSGFKSKILPLPGRVGVICGGPPCQGISGYNRHRNVDSPLNDERNQQIIVFMDIVEYLKPSYVLMENVVDILRMDKGSLGRYALSRLVNMRYQARLGIMTAGCYGLSQFRSRVFMWGAVPNKNLPPFPLPTHDVIVRYGLPLEFERNVVAY 991
BLAST of FC920445 vs. ExPASy Swiss-Prot
Match: CMT3_MAIZE (DNA (cytosine-5)-methyltransferase 3 OS=Zea mays GN=DMT105 PE=2 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 9.549e-76 Identity = 130/189 (68.78%), Postives = 153/189 (80.95%), Query Frame = 1 Query: 124 KKRGLYLKIRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTRGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAY 690 +K+G+Y K++W YGP EDTWEPI+ LS+C KI+EFV G K KILPLPGDVDVICGGPPCQG+SGFNRFRN+D PL DEKNKQ++ FMDIV +LKPK+VLMENVVDI+KFA G LG+YAL+ L+ M YQ R+GMM AG YGLPQFRMRVFLWGA + LP Y LPT+DVV+RG P F + VAY Sbjct: 460 RKKGVYFKVQWEGYGPEEDTWEPIDNLSDCPLKIREFVQEGRKRKILPLPGDVDVICGGPPCQGISGFNRFRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAY 648
BLAST of FC920445 vs. ExPASy Swiss-Prot
Match: CMT2_MAIZE (DNA (cytosine-5)-methyltransferase 2 OS=Zea mays GN=ZMET5 PE=2 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 9.549e-76 Identity = 130/189 (68.78%), Postives = 153/189 (80.95%), Query Frame = 1 Query: 124 KKRGLYLKIRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTRGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAY 690 +K+G+Y K++W YGP EDTWEPI+ LS+C KI+EFV G K KILPLPGDVDVICGGPPCQG+SGFNRFRN+D PL DEKNKQ++ FMDIV +LKPK+VLMENVVDI+KFA G LG+YAL+ L+ M YQ R+GMM AG YGLPQFRMRVFLWGA + LP Y LPT+DVV+RG P F + VAY Sbjct: 460 RKKGVYFKVQWEEYGPEEDTWEPIDNLSDCPLKIREFVQEGRKRKILPLPGDVDVICGGPPCQGISGFNRFRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAY 648
BLAST of FC920445 vs. ExPASy Swiss-Prot
Match: CMT1_ARATH (Putative DNA (cytosine-5)-methyltransferase CMT1 OS=Arabidopsis thaliana GN=CMT1 PE=5 SV=2) HSP 1 Score: 270.011 bits (689), Expect = 8.365e-72 Identity = 120/196 (61.22%), Postives = 153/196 (78.06%), Query Frame = 1 Query: 85 KILKICYGDPKEIKKRGLYLKIRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTRGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFE 672 K L I +GDP+ ++ L L +RW+ Y S DTWEP GL NC EK+KE+V GFKS +LPLPG V +CGGPPCQG+SG+NR+RN + PL D+KN+QL+VF+DI+DFLKP +VLMENVVD+++F+KG L R+A+A + MNYQ R+GMMAAG+YGLPQ R RVFLW AQP+EKLPPY LPTH+V + P EF+ Sbjct: 343 KFLGIMFGDPQGTGEKTLQLMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKFNTPKEFK 538
BLAST of FC920445 vs. ExPASy Swiss-Prot
Match: DNM1A_ORYSJ (DNA (cytosine-5)-methyltransferase 1A OS=Oryza sativa subsp. japonica GN=MET1A PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.414e-28 Identity = 59/128 (46.09%), Postives = 82/128 (64.06%), Query Frame = 1 Query: 250 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 633 K K LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L+ENV + V F KG R LA L++M YQVR G++ AGAYG+ Q R R F+W A P E LP + P H Sbjct: 1178 KIKNLPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETLPEWPEPMH 1303
BLAST of FC920445 vs. ExPASy Swiss-Prot
Match: DNMT1_ARATH (DNA (cytosine-5)-methyltransferase 1 OS=Arabidopsis thaliana GN=DMT1 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.385e-26 Identity = 57/124 (45.97%), Postives = 76/124 (61.29%), Query Frame = 1 Query: 262 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 633 LPLPG VD I GGPPCQG SG NRF + + + ++ F+ D+ +P++ L+ENV V F KG + LA L++M YQVR G++ AGAYG+ Q R R F+W A P E LP + P H Sbjct: 1183 LPLPGQVDFINGGPPCQGFSGMNRFNQSS--WSKVQCEMILAFLSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPEEVLPEWPEPMH 1304
BLAST of FC920445 vs. ExPASy Swiss-Prot
Match: DNM1B_ORYSJ (DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.313e-26 Identity = 54/124 (43.55%), Postives = 79/124 (63.71%), Query Frame = 1 Query: 262 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 633 LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L+ENV + V F KG R +A L++M YQVR G++ AG +G+ Q R R F+W A P E LP + P H Sbjct: 1183 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGETLPDWPEPMH 1304
BLAST of FC920445 vs. ExPASy Swiss-Prot
Match: DNMT1_PARLI (DNA (cytosine-5)-methyltransferase PliMCI OS=Paracentrotus lividus GN=DNMT PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.002e-24 Identity = 59/146 (40.41%), Postives = 89/146 (60.96%), Query Frame = 1 Query: 208 NCGEKIKEFVTRGFKS----KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 633 +C E ++ V +G K+ + LP GDV+++CGGPPCQG SG NRF +++ + KN + ++ D+ +P+F L+ENV + V + K ++ + AL LI+M YQ G++ AG YG+PQ R R + A P EKLP Y P H Sbjct: 1182 DCNELLR-LVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSKFKNSLISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVPQTRRRAIILAAAPGEKLPFYPEPLH 1324 The following BLAST results are available for this feature:
BLAST of FC920445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920445 ID=FC920445; Name=FC920445; organism=Citrus clementina; type=EST; length=692bpback to top |