FC920454

Overview
NameFC920454
Unique NameFC920454
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14655 contig Ccv1_Contig14655:59..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920454 vs. ExPASy Swiss-Prot
Match: IFRH_SOLTU (Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.476e-75
Identity = 142/186 (76.34%), Postives = 159/186 (85.48%), Query Frame = 1
Query:   79 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTVSGPSKSQLLDHFKNLGVNFLVGDVLNHESLVKAIKQVDVVISTVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKANIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNQK 636
            MA KSKIL IGGTGYIGKFIVEAS KAGH TFVLVREST+S P+K++L+D FK+ GV F+ GD+ +HESLVKAIKQVDVVISTVGH L+ADQVK+IAAIKEAGNVKRFFPSEFGNDVDRVH AVEP K+ ++ KA IRR VEAEGIP+TYV ++FF GY LPNL QPGA  PP DKVVI G GN K
Sbjct:    1 MAGKSKILFIGGTGYIGKFIVEASAKAGHDTFVLVRESTLSNPTKTKLIDTFKSFGVTFVHGDLYDHESLVKAIKQVDVVISTVGHALLADQVKLIAAIKEAGNVKRFFPSEFGNDVDRVH-AVEPAKAAFNTKAQIRRVVEAEGIPFTYVATFFFAGYSLPNLAQPGAAGPPNDKVVILGHGNTK 185          
BLAST of FC920454 vs. ExPASy Swiss-Prot
Match: IFRH_ARATH (Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.433e-62
Identity = 127/185 (68.65%), Postives = 142/185 (76.76%), Query Frame = 1
Query:   88 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTVSGPSKSQLLDHFKNLGVNFLVGDVLNHESLVKAIKQVDVVISTVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKANIRRAVEAEGIPYTYVESYFFDGYFLPNLLQ--PGATAPPRDKVVIFGDGNQK 636
            KSKIL IGGTGYIGKF+VEAS KAGH TF LVRE+T+S P K + +  FK+LGV  L GD+ +HESLVKAIKQVDVVISTVG   I DQ KII+AIKEAGNVKRF PSEFG DVDR   AVEP KS +  K  IRR +EAEGIPYTY  +  F GY+LP L+Q  PG T+PPRDKV I GDGN K
Sbjct:    5 KSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTILHGDLNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVDVDRT-SAVEPAKSAFAGKIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQFEPGLTSPPRDKVTILGDGNAK 188          
BLAST of FC920454 vs. ExPASy Swiss-Prot
Match: IFRH_TOBAC (Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 9.286e-62
Identity = 121/186 (65.05%), Postives = 140/186 (75.27%), Query Frame = 1
Query:   79 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTVSGPSKSQLLDHFKNLGVNFLVGDVLNHESLVKAIKQVDVVISTVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKANIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNQK 636
            ++ KSKIL IGGTGYIGK++VE S K+GHPTF L+REST+  P KS+L+D FK+ GV  L GD+ N ESL+KAIKQVDVVISTVG     DQV II AIKEAGN+KRF PSEFG DVD    A+EP  S + +K  IRR +EAEGIPYTYV   +F  +FLPNL Q  A  PPRDKVVIFGDGN K
Sbjct:    3 VSEKSKILIIGGTGYIGKYLVETSAKSGHPTFALIRESTLKNPEKSKLIDTFKSYGVTLLFGDISNQESLLKAIKQVDVVISTVGGQQFTDQVNIIKAIKEAGNIKRFLPSEFGFDVDHAR-AIEPAASLFALKVRIRRMIEAEGIPYTYVICNWFADFFLPNLGQLEAKTPPRDKVVIFGDGNPK 187          
BLAST of FC920454 vs. ExPASy Swiss-Prot
Match: IFR_MEDSA (Isoflavone reductase OS=Medicago sativa GN=IFR PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.299e-55
Identity = 115/197 (58.38%), Postives = 146/197 (74.11%), Query Frame = 1
Query:   79 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES----------TVSGP-SKSQLLDHFKNLGVNFLVGDVLNHESLVKAIKQVDVVISTVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKANIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNQK 636
            MA+++KIL +G TG IG+ IV AS+KAG+PT+ LVR++          T + P +K +L+D++++LGV  L GD+ +HE+LVKAIKQVD+VI   G  LI DQVKII AIKEAGNVK+FFPSEFG DVDR H AVEP +  ++ KA+IRR +EAEG+PYTY+  + F GYFL NL Q   T PPRDKVVI GDGN K
Sbjct:    1 MATENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTPGNVNKPKLITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDR-HEAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDTTDPPRDKVVILGDGNVK 196          
BLAST of FC920454 vs. ExPASy Swiss-Prot
Match: IFR_CICAR (Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.893e-55
Identity = 116/197 (58.88%), Postives = 141/197 (71.57%), Query Frame = 1
Query:   79 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES-----------TVSGPSKSQLLDHFKNLGVNFLVGDVLNHESLVKAIKQVDVVISTVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKANIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNQK 636
            MAS+++IL +G TG IG+ +V AS+KAG+PT+ L+R++             +  SK +LL  FK  GV  L GD+ +HE+LVKAIKQVD VI T G  LI DQVKII AIKEAGNVKRFFPSEFG DVDR H AV+P +  +D KA+IRR VEAEG+PYTY+  + F GYFL NL Q  AT PPRDKV+I GDGN K
Sbjct:    1 MASQNRILVLGPTGAIGRHVVWASIKAGNPTYALIRKTPGDINKPSLVAAANPESKEELLQSFKAAGVILLEGDMNDHEALVKAIKQVDTVICTFGRLLILDQVKIIKAIKEAGNVKRFFPSEFGLDVDR-HDAVDPVRPVFDEKASIRRVVEAEGVPYTYLCCHAFTGYFLRNLAQFDATEPPRDKVIILGDGNVK 196          
BLAST of FC920454 vs. ExPASy Swiss-Prot
Match: IFR_PEA (Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.708e-53
Identity = 113/195 (57.95%), Postives = 142/195 (72.82%), Query Frame = 1
Query:   79 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST--VSGP---------SKSQLLDHFKNLGVNFLVGDVLNHESLVKAIKQVDVVISTVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKANIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGN 630
            MA+++KIL +G TG IG+ IV AS+KAG+PT+ LVR+++  V+ P         +K +LL +++  GV  L GD+ +HE+LV AIKQVD VI   G  LI DQVK+I AIKEAGNVKRFFPSEFG DVDR H AVEP +  ++ KA+IRR VE+EG+PYTY+  + F GYFL NL Q  AT PPRDKVVI GDGN
Sbjct:    1 MATENKILILGATGAIGRHIVWASIKAGNPTYALVRKTSDNVNKPKLTEAANPETKEELLKNYQASGVILLEGDINDHETLVNAIKQVDTVICAAGRLLIEDQVKVIKAIKEAGNVKRFFPSEFGLDVDR-HDAVEPVRQVFEEKASIRRVVESEGVPYTYLCCHAFTGYFLRNLAQIDATDPPRDKVVILGDGN 194          
BLAST of FC920454 vs. ExPASy Swiss-Prot
Match: IFRH_MAIZE (Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.660e-50
Identity = 103/185 (55.68%), Postives = 127/185 (68.65%), Query Frame = 1
Query:   82 ASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTVSGPSKSQLLDHFKNLGVNFLVGDVLNHESLVKAIKQVDVVISTVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKANIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNQK 636
            + KSKIL +GGTGY+G+ +V AS + GHPT  LVR++  S P+K+ LL  F++ GV  L GD+ +  SLV A+K  DVVIS +G   IADQ +++ AIKEAGNVKRFFPSEFG DVDR  G VEP KS    K  IRRA EA GIPYTY  + FF G+ LP + Q  A  PP DK V+ GDG+ K
Sbjct:    3 SEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRT-GIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDTK 186          
BLAST of FC920454 vs. ExPASy Swiss-Prot
Match: IFRH_LUPAL (Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.541e-40
Identity = 88/189 (46.56%), Postives = 121/189 (64.02%), Query Frame = 1
Query:   88 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTVSGPSKSQLLDHFKNLGVNFLVGDVLNHESLVKAIKQVDVVISTVG------HTLIADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKANIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNQK 636
            KSK+L +GGTGY+G+ IV+AS++ GH TF+L R        K Q+L  FK  G   +     +H+SLV A+K VDVVI T+       H L+  Q+K++ AIK+AGN+KRF PSEFG D   +  A+EP + T+D K  +R+A+E   IP+TY+ +  F GYF  NL Q     PPRDKV+++GDGN K
Sbjct:    3 KSKVLVVGGTGYVGRRIVKASLEHGHETFILQRPEIGLDIEKLQILLSFKKQGAILVEASFSDHKSLVDAVKLVDVVICTMSGVHFRSHNLLT-QLKLVEAIKDAGNIKRFLPSEFGMDPALMGHALEPGRVTFDEKMTVRKAIEEANIPFTYISANCFAGYFAGNLSQMKTLLPPRDKVLLYGDGNVK 190          
BLAST of FC920454 vs. ExPASy Swiss-Prot
Match: EGS1_OCIBA (Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.796e-39
Identity = 87/189 (46.03%), Postives = 123/189 (65.08%), Query Frame = 1
Query:   70 VSEMASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTVSGPSKSQLLDHFKNLGVNFLVGDVLNHESLVKAIKQVDVVISTVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKANIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNQK 636
            + E   KSKIL  GGTGYIG  +V+ S+K GHPT+V  R ++    SK+ LLD F++LG   + G++  HE LV+ +K+VDVVIS +    I DQ KI+ AIK AGN+KRF PS+FG + DR++ A+ P ++  + K  IRRA+E   IPYTYV +  F  YF+  LL+P     P+D++ ++G G  K
Sbjct:    1 MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS----SKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRIN-ALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRP---YDPKDEITVYGTGEAK 181          
BLAST of FC920454 vs. ExPASy Swiss-Prot
Match: IGS1_PETHY (Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.443e-38
Identity = 87/187 (46.52%), Postives = 119/187 (63.64%), Query Frame = 1
Query:   88 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE-STVSGPSKSQLLDHFKNLGVNFLVGDVLNHESLVKAIKQVDVVISTVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKANIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNQKLFL 645
            K KIL +G TGY+GK++V+AS+  GHPT+  V      S  SK QLL  F++LGV    G++  H+ LV   K+VD+VIST+      +Q+K+I AIKEAGN+KRF PSEFGN+VDRV  A+   ++  D K  IRRA EA GIP+T+V +     YF+  LL P   +   ++V I+G G+ K  L
Sbjct:    5 KGKILILGATGYLGKYMVKASISLGHPTYAYVMPLKKNSDDSKLQLLKEFESLGVTIFYGELSEHDKLVAVFKEVDIVISTLAVPQYLEQLKVIEAIKEAGNIKRFVPSEFGNEVDRVR-ALPRFQAVLDNKKKIRRATEAAGIPFTFVSANSLTAYFVDYLLHPRQKS---EQVTIYGSGDAKAVL 187          
The following BLAST results are available for this feature:
BLAST of FC920454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
IFRH_SOLTU1.476e-7576.34Isoflavone reductase homolog OS=Solanum tuberosum ... [more]
IFRH_ARATH1.433e-6268.65Isoflavone reductase homolog P3 OS=Arabidopsis tha... [more]
IFRH_TOBAC9.286e-6265.05Isoflavone reductase homolog A622 OS=Nicotiana tab... [more]
IFR_MEDSA1.299e-5558.38Isoflavone reductase OS=Medicago sativa GN=IFR PE=... [more]
IFR_CICAR2.893e-5558.88Isoflavone reductase OS=Cicer arietinum GN=IFR PE=... [more]
IFR_PEA2.708e-5357.95Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 ... [more]
IFRH_MAIZE3.660e-5055.68Isoflavone reductase homolog IRL OS=Zea mays GN=IR... [more]
IFRH_LUPAL1.541e-4046.56Isoflavone reductase homolog OS=Lupinus albus PE=2... [more]
EGS1_OCIBA3.796e-3946.03Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=... [more]
IGS1_PETHY1.443e-3846.52Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 P... [more]

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Properties
Property NameValue
Genbank descriptionC32008F03EF RVDevelop1 Citrus clementina cDNA clone C32008F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920454 ID=FC920454; Name=FC920454; organism=Citrus clementina; type=EST; length=658bp
GATTTTAGTCCATTTAATCAAACGTAAAAGTGCGGCTACCAGCTAACTCT
CCGGAATTGAACTGAACGAGTTTCAGAAATGGCATCGAAAAGCAAGATTC
TATCCATCGGCGGGACAGGGTATATCGGTAAATTCATCGTGGAAGCTAGC
GTGAAAGCCGGCCACCCGACGTTCGTGCTCGTGAGGGAATCCACAGTCTC
TGGTCCTTCCAAATCTCAGCTCCTCGACCACTTCAAAAACCTCGGCGTCA
ATTTCCTTGTCGGAGATGTTTTGAATCACGAGAGCTTGGTGAAGGCGATA
AAACAAGTGGACGTGGTGATATCAACAGTTGGTCACACTTTAATAGCCGA
TCAGGTCAAGATTATTGCTGCCATTAAAGAAGCCGGTAACGTTAAGAGAT
TCTTCCCATCGGAATTTGGAAATGATGTTGATCGAGTCCATGGCGCCGTG
GAGCCAACAAAATCGACGTATGACGTAAAGGCGAACATCCGCCGAGCCGT
TGAGGCAGAAGGCATTCCGTACACGTACGTAGAATCTTATTTTTTTGATG
GCTACTTCCTCCCTAATTTGTTGCAGCCTGGGGCCACTGCCCCCCCTAGG
GATAAGGTTGTCATCTTCGGCGATGGNAATCAAAAGCTGTTTTTAACAGG
AAGATGAT
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