FC920469
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920469 vs. ExPASy Swiss-Prot
Match: STHY_ARATH (Probable salt tolerance-like protein At1g78600 OS=Arabidopsis thaliana GN=At1g78600 PE=1 SV=2) HSP 1 Score: 215.312 bits (547), Expect = 2.810e-55 Identity = 110/210 (52.38%), Postives = 137/210 (65.24%), Query Frame = 3 Query: 87 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVGLEPADPGAXXXXXXXXXGENILDMKSHSLSRRDAL---------MPVAAECKEVLPASSGGVGDFAMNKVSF-AGGSAAGSTPSWHMDDFLALPELNXNYSFMDN 686 M+IQCNVCEAAEA VLCCADEAALCW CD+K+HAANKLA KHQRVPLS+S++ +PKCDICQE SGFFFCLQDRALLCRKCDVAIHT N +VSAHQRFLLTG+KVGLE D G + ++ K S + + + V+P + V D K+ + GS GS P W +++ L + + +Y +M+N Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTG-PSTKSSPTNDDKTMETKPFVQSIPEPQKMAFDHHHHQQQQEQQEGVIPGTK--VNDQTSTKLPLVSSGSTTGSIPQWQIEEIFGLTDFDQSYEYMEN 207
BLAST of FC920469 vs. ExPASy Swiss-Prot
Match: STO_ARATH (Salt tolerance protein OS=Arabidopsis thaliana GN=STO PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.953e-38 Identity = 71/106 (66.98%), Postives = 87/106 (82.08%), Query Frame = 3 Query: 87 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVGL 404 M+IQC+VCE A A V+CCADEAALC +CD ++HAANKLASKHQR+ L+S ST+ P+CDICQE + F FC++DRALLCR CD +IH ANS + HQRFL TG+KV L Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVAL 106
BLAST of FC920469 vs. ExPASy Swiss-Prot
Match: STH_ARATH (Salt tolerance-like protein OS=Arabidopsis thaliana GN=STH PE=1 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.227e-34 Identity = 67/106 (63.21%), Postives = 82/106 (77.36%), Query Frame = 3 Query: 87 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVGL 404 M+IQC+VCE A A ++CCADEAALC +CD +VHAANKLASKHQR+ L S ST+ P CDIC E + F FC++DRALLCR CD A H N+ + HQRFL TG++V L Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVAL 106
BLAST of FC920469 vs. ExPASy Swiss-Prot
Match: STHX_ARATH (Probable salt tolerance-like protein At1g75540 OS=Arabidopsis thaliana GN=At1g75540 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.795e-33 Identity = 79/195 (40.51%), Postives = 106/195 (54.36%), Query Frame = 3 Query: 87 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPL---SSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVGLEPADPGAXXXXXXXXXGENILDMKSHSLSRRDAL-MPVAA--ECKEVLPASSGGVGDFAMNK---VSFAGGSAAGSTPSWHMDDFL 644 M+I+C+VC+ EA V C ADEA+LC CD +VH ANKLASKH R L SSS+T P CDICQ+ FC QDRA+LC+ CD +IH AN + H RFLLTGVK+ + + S+S L P++A + ++ P S GD ++N+ S + P WH++DFL Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKSSSSSSSNQDFSVPGSSISNPPPLKKPLSAPPQSNKIQPFSKINGGDASVNQWGSTSTISEYLMDTLPGWHVEDFL 195
BLAST of FC920469 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.480e-16 Identity = 41/92 (44.57%), Postives = 50/92 (54.35%), Query Frame = 3 Query: 99 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 374 C+ C +A V C AD A LC CD +VHAAN+LAS+H+RV + C C+ FFC D A LC CD IH+AN HQR Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV---------CQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQR 94
BLAST of FC920469 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.842e-15 Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 3 Query: 99 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVGLEPA 413 C+ C++ A + C AD A LC +CD K+H ANKLAS+H+RV L C++C++ C D A LC CD IH+AN H+R +T + PA Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL---------CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPA 103
BLAST of FC920469 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.848e-15 Identity = 39/92 (42.39%), Postives = 49/92 (53.26%), Query Frame = 3 Query: 99 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 374 C+ C +A V C AD A LC CD +VHAAN++AS+H+RV + C C+ F C D A LC CD IH+AN HQR Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV---------CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQR 98
BLAST of FC920469 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 8.270e-15 Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 3 Query: 99 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLT 386 C+ C++A A + C D A LC CD KVHAANKLAS+H RV + C++C++ C D A LC CD IH+AN H+R +T Sbjct: 6 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWM---------CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 92
BLAST of FC920469 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.144e-14 Identity = 36/92 (39.13%), Postives = 49/92 (53.26%), Query Frame = 3 Query: 99 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 374 C+ C + V C AD A LC CD +VH+AN++AS+H+RV + C+ C+ F C D A LC CD +H+AN HQR Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV---------CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQR 102
BLAST of FC920469 vs. ExPASy Swiss-Prot
Match: COL13_ARATH (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana GN=COL13 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.927e-13 Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = 3 Query: 99 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRF 377 C+ C+++ A V C AD A LC CD +VH AN+L +KH R L CD C E+ FC +R++LC+ CD HTA+S + + + F Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL---------CDSCNESPSSLFCETERSVLCQNCDWQHHTASSSLHSRRPF 96 The following BLAST results are available for this feature:
BLAST of FC920469 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920469 ID=FC920469; Name=FC920469; organism=Citrus clementina; type=EST; length=751bpback to top |