FC920483
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920483 vs. ExPASy Swiss-Prot
Match: RISA_ACTPL (Riboflavin synthase alpha chain OS=Actinobacillus pleuropneumoniae GN=ribE PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.204e-36 Identity = 80/155 (51.61%), Postives = 103/155 (66.45%), Query Frame = 1 Query: 250 LFTGIVEEMGEIEQLGASNDGGFVMKIRAKTVLEGVHLGDSIAVNGTCLTVTEFGTQLEDFTDGLSPETLRKTSLIELQPGSLVNLERAVQPTSRMGGHFVQGHVDGTGVIVSMEPEEDSLWIKVKTDKSLLKYIVPKGFIAIDGTSLTVVDVFD 714 +FTGI+EE+G+I Q+ + V+ I A VL+ VHLGD+IAVNG CLTVT F + FT + ETL++TSL EL+ S VNLERA+ R GGH V GH+DGTG I + P +S W ++KT L++YI+ KG I IDG SLTVVD D Sbjct: 1 MFTGIIEEVGKIAQIHKQGEFA-VVTINATKVLQDVHLGDTIAVNGVCLTVTSFSSN--QFTADVMSETLKRTSLGELKSNSPVNLERAMAANGRFGGHIVSGHIDGTGEIAEITPAHNSTWYRIKTSPKLMRYIIEKGSITIDGISLTVVDTDD 152
BLAST of FC920483 vs. ExPASy Swiss-Prot
Match: RISA_SCHPO (Riboflavin synthase alpha chain OS=Schizosaccharomyces pombe GN=rib5 PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.060e-35 Identity = 79/156 (50.64%), Postives = 107/156 (68.59%), Query Frame = 1 Query: 250 LFTGIVEEMGEIEQLGASNDGGFVMKIRAKTVLEGVHLGDSIAVNGTCLTVTEFGTQLEDFTDGLSPETLRKTSLIELQPGSLVNLERAVQPTSRMGGHFVQGHVDGTGVIVSMEPEEDSLWIKVK-TDKSLLKYIVPKGFIAIDGTSLTVVDVFD 714 +FTG+VE +G ++ + + D GF MKI A +L+ H GDSIAVNGTCLTVT+F FT G++PE+LR T+L + + G VNLERAV ++RMGGHFVQGHVD IV + + +++ + D +LKYIV KG+IA+DGTSLT+ V D Sbjct: 1 MFTGLVEAIGVVKDVQGTIDNGFAMKIEAPQILDDCHTGDSIAVNGTCLTVTDFDRY--HFTVGIAPESLRLTNLGQCKAGDPVNLERAVLSSTRMGGHFVQGHVDTVAEIVEKKQDGEAIDFTFRPRDPFVLKYIVYKGYIALDGTSLTITHVDD 154
BLAST of FC920483 vs. ExPASy Swiss-Prot
Match: RISA_PICGU (Riboflavin synthase alpha chain OS=Pichia guilliermondii GN=RIB5 PE=2 SV=3) HSP 1 Score: 140.969 bits (354), Expect = 6.185e-33 Identity = 84/160 (52.50%), Postives = 100/160 (62.50%), Query Frame = 1 Query: 250 LFTGIVEEMGEIEQLG-----ASNDGGFVMKIR-AKTVLEGVHLGDSIAVNGTCLTVTEFGTQLEDFTDGLSPETLRKTSLIELQPGSLVNLERAVQPTSRMGGHFVQGHVDGTGVIVSMEPEEDSLWIKVK-TDKSLLKYIVPKGFIAIDGTSLTVVDV 708 +FTG+VE +G + Q+ AS G M I +LE V LGDSI NG CLTVTEF F G+SPETLR++ L EL+PGS VNLERAV+ RMGGH VQGHVD IV+ + +++ K D KYIV KGFIAIDGTSLTV DV Sbjct: 1 MFTGLVEHIGTVLQVTEKDTTASGGDGVSMVIGDCSKILEDVQLGDSICTNGVCLTVTEFDMARSQFKVGISPETLRRSDLGELKPGSKVNLERAVKADVRMGGHVVQGHVDTIATIVNRRGDGNAINFTFKLRDSQYGKYIVEKGFIAIDGTSLTVTDV 160
BLAST of FC920483 vs. ExPASy Swiss-Prot
Match: RISA_BACSU (Riboflavin synthase alpha chain OS=Bacillus subtilis GN=ribE PE=1 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 2.350e-32 Identity = 74/150 (49.33%), Postives = 97/150 (64.67%), Query Frame = 1 Query: 250 LFTGIVEEMGEIEQLGASNDGGFVMKIRAKTVLEGVHLGDSIAVNGTCLTVTEFGTQLEDFTDGLSPETLRKTSLIELQPGSLVNLERAVQPTSRMGGHFVQGHVDGTGVIVSMEPEEDSLWIKVKTDKSLLKYIVPKGFIAIDGTSLTV 699 +FTGI+EE G IE + + + I+ +LE VHLGDSIAVNG CLTVT+F FT + PET++ TSL +L GS VNLERA+ R GGHFV GHVDGT I +E + ++++ +K D SL K +V KG I +DG SLT+ Sbjct: 1 MFTGIIEETGTIESMKKAGHA-MALTIKCSKILEDVHLGDSIAVNGICLTVTDFTKN--QFTVDVMPETVKATSLNDLTKGSKVNLERAMAANGRFGGHFVSGHVDGTAEITRIEEKSNAVYYDLKMDPSLTKTLVLKGSITVDGVSLTI 147
BLAST of FC920483 vs. ExPASy Swiss-Prot
Match: RISA_YEAST (Riboflavin synthase alpha chain OS=Saccharomyces cerevisiae GN=RIB5 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.401e-30 Identity = 77/160 (48.12%), Postives = 101/160 (63.12%), Query Frame = 1 Query: 250 LFTGIVEEMGEIEQLGASND---GGFVMKI---RAKTVLEGVHLGDSIAVNGTCLTVTEFGTQLEDFTDGLSPETLRKTSLIELQPGSLVNLERAVQPTSRMGGHFVQGHVDGTGVIVSMEPEEDSLWIKVK-TDKSLLKYIVPKGFIAIDGTSLTVVDV 708 +FTGIVE MG + + +D GG + I A ++L H+GDSIAVNG CLTVTEF + F G+SPET++++++ G+ VNLERAV R GGH+VQGHVD IVS PE +S+ + D+ KYIV KGFI IDGTSLT++ V Sbjct: 1 MFTGIVECMGTVLENNPYDDSESGGQGVSITIGNAGSILTDCHVGDSIAVNGVCLTVTEFNN--DSFKVGISPETIKRSNVASWIQGTQVNLERAVSQDVRFGGHYVQGHVDTVANIVSRRPEGNSIIFGFQLRDQEYFKYIVEKGFICIDGTSLTIIKV 158
BLAST of FC920483 vs. ExPASy Swiss-Prot
Match: RISA_BACAM (Riboflavin synthase alpha chain OS=Bacillus amyloliquefaciens GN=ribE PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.825e-28 Identity = 71/155 (45.81%), Postives = 91/155 (58.71%), Query Frame = 1 Query: 250 LFTGIVEEMGEIEQLGASNDGGFVMKIRAKTVLEGVHLGDSIAVNGTCLTVTEFGTQLEDFTDGLSPETLRKTSLIELQPGSLVNLERAVQPTSRMGGHFVQGHVDGTGVIVSMEPEEDSLWIKVKTDKSLLKYIVPKGFIAIDGTSLTVVDVFD 714 +FTGIVEE G I+ + + + I A V V LGDSIAVNG CLTVT F FT + PET++ TSL L GS VNLERA+ R GGHFV GHVDGT I +E + ++++ +K L K +V KG I +DG S T+ + D Sbjct: 1 MFTGIVEETGTIQAIKKTGLS-MALTIAASKVTSDVRLGDSIAVNGICLTVTGFSDN--QFTVDVMPETVKATSLNGLSKGSKVNLERAMSANGRFGGHFVSGHVDGTAEITRIEKKSNAVYYDLKLSPELTKTLVLKGSITVDGVSSTIFGLSD 152
BLAST of FC920483 vs. ExPASy Swiss-Prot
Match: RISA_MYCTU (Riboflavin synthase alpha chain OS=Mycobacterium tuberculosis GN=ribE PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.624e-27 Identity = 74/152 (48.68%), Postives = 93/152 (61.18%), Query Frame = 1 Query: 250 LFTGIVEEMGEIEQLGASNDGGFVMKIRAKTVLEGVHLGDSIAVNGTCLTVTEFGTQLED--FTDGLSPETLRKTSLIELQPGSLVNLERAVQPTSRMGGHFVQGHVDGTGVIVSMEPEEDSLWIKVKTDKSLLKYIVPKGFIAIDGTSLTV 699 +FTGIVEE GE+ A D + IR V GDSIAVNG CLTV + L D FT + ETL +++L EL+PGS VNLERA SR+GGH VQGHVD TG IV+ P E ++++ S+ +Y+V KG I +DG SLTV Sbjct: 1 MFTGIVEERGEVTGREALVDAAR-LTIRGPMVTADAGHGDSIAVNGVCLTVVDV---LPDGQFTADVMAETLNRSNLGELRPGSRVNLERAAALGSRLGGHIVQGHVDATGEIVARCPSEHWEVVRIEMPASVARYVVEKGSITVDGISLTV 148
BLAST of FC920483 vs. ExPASy Swiss-Prot
Match: RISA_MYCBO (Riboflavin synthase alpha chain OS=Mycobacterium bovis GN=ribE PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.624e-27 Identity = 74/152 (48.68%), Postives = 93/152 (61.18%), Query Frame = 1 Query: 250 LFTGIVEEMGEIEQLGASNDGGFVMKIRAKTVLEGVHLGDSIAVNGTCLTVTEFGTQLED--FTDGLSPETLRKTSLIELQPGSLVNLERAVQPTSRMGGHFVQGHVDGTGVIVSMEPEEDSLWIKVKTDKSLLKYIVPKGFIAIDGTSLTV 699 +FTGIVEE GE+ A D + IR V GDSIAVNG CLTV + L D FT + ETL +++L EL+PGS VNLERA SR+GGH VQGHVD TG IV+ P E ++++ S+ +Y+V KG I +DG SLTV Sbjct: 1 MFTGIVEERGEVTGREALVDAAR-LTIRGPMVTADAGHGDSIAVNGVCLTVVDV---LPDGQFTADVMAETLNRSNLGELRPGSRVNLERAAALGSRLGGHIVQGHVDATGEIVARCPSEHWEVVRIEMPASVARYVVEKGSITVDGISLTV 148
BLAST of FC920483 vs. ExPASy Swiss-Prot
Match: RISA_AQUAE (Riboflavin synthase alpha chain OS=Aquifex aeolicus GN=ribE PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.287e-26 Identity = 69/152 (45.39%), Postives = 99/152 (65.13%), Query Frame = 1 Query: 250 LFTGIVEEMGEIEQLGASNDGGFVMKIRAKTVLEGVHLGDSIAVNGTCLTVTEFGTQLEDFTDGLSPETLRKTSLIELQPGSLVNLERAVQPTSRMGGHFVQGHVDGTGVIVSME--PEEDSLWIKVKTDKSLLKYIVPKGFIAIDGTSLTV 699 +FTG+VE++G+++ L S+ G K+ +T LE V LGDS++VNG CLTV + + F +SPETL++T+L +L+ G VNLERA++ R+GGH VQGHVD T + S E L I++ + S+ Y+V KG IA+DG SLTV Sbjct: 1 MFTGLVEDLGKVKNLTLSSKGA---KLSVETKLEDVKLGDSVSVNGACLTVVDIKSSTLTFD--VSPETLKRTNLGKLKTGDYVNLERALRVGERLGGHIVQGHVDFTAPVKSFNFLGEHYELVIEIPEEWSI--YVVEKGSIALDGISLTV 145
BLAST of FC920483 vs. ExPASy Swiss-Prot
Match: RISA_PHOLE (Riboflavin synthase alpha chain OS=Photobacterium leiognathi GN=ribE PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.688e-22 Identity = 59/154 (38.31%), Postives = 89/154 (57.79%), Query Frame = 1 Query: 250 LFTGIVEEMGEIEQLGASNDGGFVMKIRAKTVLEGVHLGDSIAVNGTCLTVTEFGTQLEDFTDGLSPETLRKTSLIELQPGSLVNLERAVQPTSRMGGHFVQGHVDGTGVIVSMEPEEDSLWIKVKTDKSLLKYIVPKGFIAIDGTSLTVVDVF 711 +FTGI+E +G I + N+ ++ + V++GDSIA NG CLTV++ +T LS ET ++T+ + G VNLE+A+ PT+R+GGH V GHVDG G ++ + ++ I V L KY+ KG + IDG SLT+ V+ Sbjct: 1 MFTGIIESIGNIGAIIRHNEDLSIVVNTNNLDISDVNIGDSIATNGVCLTVSKLLPS--GYTADLSLETYKRTAFHSYRIGQEVNLEKAMLPTTRLGGHLVSGHVDGVGEVIEFKRNGRAINIWVAVPVQLKKYLSEKGSVTIDGISLTINAVY 152 The following BLAST results are available for this feature:
BLAST of FC920483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920483 ID=FC920483; Name=FC920483; organism=Citrus clementina; type=EST; length=715bpback to top |