FC920491

Overview
NameFC920491
Unique NameFC920491
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12151 contig Ccv1_Contig12151:639..1327. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920491 vs. ExPASy Swiss-Prot
Match: VSR1_ARATH (Vacuolar-sorting receptor 1 OS=Arabidopsis thaliana GN=VSR1 PE=1 SV=2)

HSP 1 Score: 420.239 bits (1079), Expect = 4.962e-117
Identity = 188/229 (82.10%), Postives = 215/229 (93.89%), Query Frame = 3
Query:    3 QKGGAAAILVADDKTEPLITMDTPEEENADAEYLQNITIPSALISKSLGDSIKKSLSGGEMVNMNLDWTEALPHPDERVEYEFWTNSNDECGPKCESQIDFVKNFKGAAQILEQRGYTQFTPHYITWYCPEAFILSKQCKSQCINHGRYCAPDPEQDFSRGYDGKDVVVQNLRQACFFKVANESRKPWLWWDYVTDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDE 689
            Q+ GAAAILVAD K EPLITMDTPEE+ +DA+YLQNITIPSALI+K+LGDSIK +LSGG+MVNM LDWTE++PHPDERVEYE WTNSNDECG KC++QI+F+KNFKGAAQILE+ G+TQFTPHYITWYCPEAF LSKQCKSQCINHGRYCAPDPEQDF++GYDGKDVVVQNLRQAC ++V N++ KPW+WWDYVTDFAIRCPMKEKKYTKECA+ +IKSLG+DLKKVD+
Sbjct:  108 QQAGAAAILVADSKAEPLITMDTPEEDKSDADYLQNITIPSALITKTLGDSIKSALSGGDMVNMKLDWTESVPHPDERVEYELWTNSNDECGKKCDTQIEFLKNFKGAAQILEKGGHTQFTPHYITWYCPEAFTLSKQCKSQCINHGRYCAPDPEQDFTKGYDGKDVVVQNLRQACVYRVMNDTGKPWVWWDYVTDFAIRCPMKEKKYTKECADGIIKSLGIDLKKVDK 336          
BLAST of FC920491 vs. ExPASy Swiss-Prot
Match: VSR1_PEA (Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP80 PE=1 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 9.380e-108
Identity = 173/229 (75.55%), Postives = 202/229 (88.21%), Query Frame = 3
Query:    3 QKGGAAAILVADDKTEPLITMDTPEEENADAEYLQNITIPSALISKSLGDSIKKSLSGGEMVNMNLDWTEALPHPDERVEYEFWTNSNDECGPKCESQIDFVKNFKGAAQILEQRGYTQFTPHYITWYCPEAFILSKQCKSQCINHGRYCAPDPEQDFSRGYDGKDVVVQNLRQACFFKVANESRKPWLWWDYVTDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDE 689
            QK GA+A+LVADD  EPLITMDTPEE+ + A+Y++NITIPSALI KS G+ +K ++SGG+MVN+NLDW EA+PHPD+RVEYE WTNSNDECG KC+  I+F+K+FKGAAQILE+ GYTQFTPHYITWYCP AF LSKQCKSQCINHGRYCAPDPEQDF+ GYDGKDVVV+NLRQ C FKVA E+ K W+WWDYVTDF IRCPMKEKKY KECA  VIKSLG+D++K+D+
Sbjct:  108 QKAGASAVLVADDIEEPLITMDTPEEDVSSAKYIENITIPSALIGKSFGEKLKDAISGGDMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLIEFLKDFKGAAQILEKGGYTQFTPHYITWYCPHAFTLSKQCKSQCINHGRYCAPDPEQDFNTGYDGKDVVVENLRQLCVFKVAKETEKSWVWWDYVTDFQIRCPMKEKKYNKECANSVIKSLGLDVEKIDK 336          
BLAST of FC920491 vs. ExPASy Swiss-Prot
Match: VSR3_ARATH (Vacuolar-sorting receptor 3 OS=Arabidopsis thaliana GN=VSR3 PE=2 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 7.941e-107
Identity = 170/229 (74.24%), Postives = 203/229 (88.65%), Query Frame = 3
Query:    3 QKGGAAAILVADDKTEPLITMDTPEEENADAEYLQNITIPSALISKSLGDSIKKSLSGGEMVNMNLDWTEALPHPDERVEYEFWTNSNDECGPKCESQIDFVKNFKGAAQILEQRGYTQFTPHYITWYCPEAFILSKQCKSQCINHGRYCAPDPEQDFSRGYDGKDVVVQNLRQACFFKVANESRKPWLWWDYVTDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDE 689
            QK GA+A+LVAD+  EPLITMDTPEE+ + A+Y++NITIPSAL++K  G+ +KK++SGG+MVN+NLDW EA+PHPD+RVEYE WTNSNDECG KC+  ++FVK+FKGAAQILE+ G+TQF PHYITWYCP AF LS+QCKSQCIN GRYCAPDPEQDFS GYDGKDVVV+NLRQ C +KVANE+ KPW+WWDYVTDF IRCPMKEKKY KECA+ VIKSLG+D KK+D+
Sbjct:  113 QKAGASAVLVADNVDEPLITMDTPEEDVSSAKYIENITIPSALVTKGFGEKLKKAISGGDMVNLNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMEFVKDFKGAAQILEKGGFTQFRPHYITWYCPHAFTLSRQCKSQCINKGRYCAPDPEQDFSSGYDGKDVVVENLRQLCVYKVANETGKPWVWWDYVTDFQIRCPMKEKKYNKECADSVIKSLGIDSKKLDK 341          
BLAST of FC920491 vs. ExPASy Swiss-Prot
Match: VSR4_ARATH (Vacuolar-sorting receptor 4 OS=Arabidopsis thaliana GN=VSR4 PE=2 SV=2)

HSP 1 Score: 385.956 bits (990), Expect = 1.037e-106
Identity = 169/229 (73.80%), Postives = 203/229 (88.65%), Query Frame = 3
Query:    3 QKGGAAAILVADDKTEPLITMDTPEEENADAEYLQNITIPSALISKSLGDSIKKSLSGGEMVNMNLDWTEALPHPDERVEYEFWTNSNDECGPKCESQIDFVKNFKGAAQILEQRGYTQFTPHYITWYCPEAFILSKQCKSQCINHGRYCAPDPEQDFSRGYDGKDVVVQNLRQACFFKVANESRKPWLWWDYVTDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDE 689
            QK GA+A+LVAD+  EPLITMDTPEE+ + A+Y++NITIPSAL++K  G+ +KK++SGG+MVN+NLDW EA+PHPD+RVEYE WTNSNDECG KC+  ++FVK+FKGAAQILE+ G+TQF PHYITWYCP AF LS+QCKSQCIN GRYCAPDPEQDFS GYDGKDVVV+NLRQ C +KVANE+ KPW+WWDYVTDF IRCPMKEKKY K+CAE VIKSLG+D +K+D+
Sbjct:  113 QKAGASAVLVADNVDEPLITMDTPEEDVSSAKYIENITIPSALVTKGFGEKLKKAISGGDMVNLNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMEFVKDFKGAAQILEKGGFTQFRPHYITWYCPHAFTLSRQCKSQCINKGRYCAPDPEQDFSSGYDGKDVVVENLRQLCVYKVANETGKPWVWWDYVTDFQIRCPMKEKKYNKDCAESVIKSLGIDSRKIDK 341          
BLAST of FC920491 vs. ExPASy Swiss-Prot
Match: VSR2_ARATH (Vacuolar-sorting receptor 2 OS=Arabidopsis thaliana GN=VSR2 PE=2 SV=1)

HSP 1 Score: 385.956 bits (990), Expect = 1.037e-106
Identity = 170/229 (74.24%), Postives = 207/229 (90.39%), Query Frame = 3
Query:    3 QKGGAAAILVADDKTEPLITMDTPEEENADAEYLQNITIPSALISKSLGDSIKKSLSGGEMVNMNLDWTEALPHPDERVEYEFWTNSNDECGPKCESQIDFVKNFKGAAQILEQRGYTQFTPHYITWYCPEAFILSKQCKSQCINHGRYCAPDPEQDFSRGYDGKDVVVQNLRQACFFKVANESRKPWLWWDYVTDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDE 689
            Q+ GAA ILVAD++ E LITMD PE+E +DA+YLQNITIPSAL+S+SLG +IK +++ G+ V+++LDW EALPHP++RV YE WTNSNDECG KC++QI F+K FKGAAQILE+ GYT+FTPHYITWYCPEAF+ S+QCK+QCIN GRYCAPDPEQDFSRGY+GKDV++QNLRQACFF+V NES KPWLWWDYVTDFAIRCPMKE+KY K+CA+QVI+SLGVD+KK+D+
Sbjct:  112 QRAGAATILVADNRPEQLITMDAPEDETSDADYLQNITIPSALVSRSLGSAIKTAIAHGDPVHISLDWREALPHPNDRVAYELWTNSNDECGSKCDAQIRFLKRFKGAAQILEKGGYTRFTPHYITWYCPEAFLASRQCKTQCINGGRYCAPDPEQDFSRGYNGKDVIIQNLRQACFFRVTNESGKPWLWWDYVTDFAIRCPMKEEKYNKKCADQVIQSLGVDVKKIDK 340          
BLAST of FC920491 vs. ExPASy Swiss-Prot
Match: VSR6_ARATH (Vacuolar-sorting receptor 6 OS=Arabidopsis thaliana GN=VSR6 PE=2 SV=2)

HSP 1 Score: 331.643 bits (849), Expect = 2.321e-90
Identity = 144/227 (63.44%), Postives = 184/227 (81.06%), Query Frame = 3
Query:    3 QKGGAAAILVADDKTEPLITMDTPEEENADAEYLQNITIPSALISKSLGDSIKKSLSGGEMVNMNLDWTEALPHPDERVEYEFWTNSNDECGPKCESQIDFVKNFKGAAQILEQRGYTQFTPHYITWYCPEAFILSKQCKSQCINHGRYCAPDPEQDFSRGYDGKDVVVQNLRQACFFKVANESRKPWLWWDYVTDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKV 683
            Q+ G AA+LVAD+  EPLITMD+PEE     ++++ + IPSALI  S  +++K++L  GE V + +DW+E+LPHPDERVEYE WTN+NDECG +C+ Q++FVKNFKG AQILE+ GY+ FTPHYITW+CP+ ++ S QCKSQCIN GRYCAPDPEQDF  GYDGKD+V +NLRQ C  KVA E+ + W+WWDYVTDF IRC MKEKKY+KECAE+V++SLG+ L K+
Sbjct:  110 QQSGVAAVLVADNVDEPLITMDSPEESKEADDFIEKLNIPSALIDFSFANTLKQALKKGEEVVLKIDWSESLPHPDERVEYELWTNTNDECGARCDEQMNFVKNFKGHAQILEKGGYSLFTPHYITWFCPKDYVSSNQCKSQCINQGRYCAPDPEQDFGDGYDGKDIVFENLRQLCVHKVAKENNRSWVWWDYVTDFHIRCSMKEKKYSKECAERVVESLGLPLDKI 336          
BLAST of FC920491 vs. ExPASy Swiss-Prot
Match: VSR7_ARATH (Vacuolar-sorting receptor 7 OS=Arabidopsis thaliana GN=VSR7 PE=2 SV=2)

HSP 1 Score: 329.331 bits (843), Expect = 1.152e-89
Identity = 144/227 (63.44%), Postives = 180/227 (79.30%), Query Frame = 3
Query:    3 QKGGAAAILVADDKTEPLITMDTPEEENADAEYLQNITIPSALISKSLGDSIKKSLSGGEMVNMNLDWTEALPHPDERVEYEFWTNSNDECGPKCESQIDFVKNFKGAAQILEQRGYTQFTPHYITWYCPEAFILSKQCKSQCINHGRYCAPDPEQDFSRGYDGKDVVVQNLRQACFFKVANESRKPWLWWDYVTDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKV 683
            Q+ GAAA+LVAD+  EPL+TMD+PEE      +++ +TIPS LI KS GD +++    G+ + + LDW E++PHPD+RVEYE WTNSNDECG +C+ Q+DFVKNFKG AQILE+ GYT FTPHYITW+CP  FI S  CKSQCINHGRYCAPDPE +F  GY+GKDVV++NLRQ C  +VANES +PW+WWDYVTDF  RC MKEKKY+ +CAE VIKSL + ++K+
Sbjct:  111 QQAGAAAVLVADNVDEPLLTMDSPEESKDADGFIEKLTIPSVLIDKSFGDDLRQGFQKGKNIVIKLDWRESVPHPDKRVEYELWTNSNDECGARCDEQMDFVKNFKGHAQILEKGGYTAFTPHYITWFCPFQFINSPHCKSQCINHGRYCAPDPEDNFREGYEGKDVVLENLRQLCVHRVANESSRPWVWWDYVTDFHSRCSMKEKKYSIDCAESVIKSLNLPIEKI 337          
BLAST of FC920491 vs. ExPASy Swiss-Prot
Match: VSR5_ARATH (Vacuolar-sorting receptor 5 OS=Arabidopsis thaliana GN=VSR5 PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 2.656e-86
Identity = 140/227 (61.67%), Postives = 181/227 (79.74%), Query Frame = 3
Query:    3 QKGGAAAILVADDKTEPLITMDTPEEENADAEYLQNITIPSALISKSLGDSIKKSLSGGEMVNMNLDWTEALPHPDERVEYEFWTNSNDECGPKCESQIDFVKNFKGAAQILEQRGYTQFTPHYITWYCPEAFILSKQCKSQCINHGRYCAPDPEQDFSRGYDGKDVVVQNLRQACFFKVANESRKPWLWWDYVTDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKV 683
            Q+ GAAA+L+AD+  EPLITMDTP++E  D +++  + IPSALI +S GDS+KK+L  GE V + +DW+E++P+PDERVEYE W N+NDECG  C+ QIDF+KNFKG AQILE+ GYT F PHYI+W CP+  +LSKQC++QCIN GRYCA D +Q+F  GY+GKDVV +NLRQ C  KVA E    W+WWDYVTDF IRC MKEKKY++ECAE +++SLG+ L+K+
Sbjct:  111 QQSGAAAVLLADNIVEPLITMDTPQDE--DPDFIDKVKIPSALILRSFGDSLKKALKRGEEVILKMDWSESIPNPDERVEYELWANTNDECGVHCDKQIDFIKNFKGMAQILEKGGYTLFRPHYISWVCPKELLLSKQCRTQCINQGRYCALDTKQEFEDGYNGKDVVYENLRQLCVHKVAKEKNTSWVWWDYVTDFNIRCSMKEKKYSRECAETIVESLGLSLEKI 335          
The following BLAST results are available for this feature:
BLAST of FC920491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
VSR1_ARATH4.962e-11782.10Vacuolar-sorting receptor 1 OS=Arabidopsis thalian... [more]
VSR1_PEA9.380e-10875.55Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP... [more]
VSR3_ARATH7.941e-10774.24Vacuolar-sorting receptor 3 OS=Arabidopsis thalian... [more]
VSR4_ARATH1.037e-10673.80Vacuolar-sorting receptor 4 OS=Arabidopsis thalian... [more]
VSR2_ARATH1.037e-10674.24Vacuolar-sorting receptor 2 OS=Arabidopsis thalian... [more]
VSR6_ARATH2.321e-9063.44Vacuolar-sorting receptor 6 OS=Arabidopsis thalian... [more]
VSR7_ARATH1.152e-8963.44Vacuolar-sorting receptor 7 OS=Arabidopsis thalian... [more]
VSR5_ARATH2.656e-8661.67Vacuolar-sorting receptor 5 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionC32009B01EF RVDevelop1 Citrus clementina cDNA clone C32009B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920491 ID=FC920491; Name=FC920491; organism=Citrus clementina; type=EST; length=689bp
CGCAAAAAGGTGGAGCTGCTGCTATTCTTGTGGCAGATGATAAGACTGAA
CCTTTGATTACCATGGACACCCCTGAAGAAGAGAATGCAGACGCTGAATA
TCTACAAAACATCACCATTCCCTCAGCCCTTATAAGCAAATCTTTGGGTG
ACAGTATCAAGAAGTCTCTAAGTGGTGGGGAAATGGTTAACATGAATCTA
GATTGGACAGAGGCTCTTCCGCATCCTGATGAGCGTGTGGAGTATGAATT
CTGGACAAATAGCAACGATGAGTGCGGGCCAAAGTGTGAGAGCCAGATTG
ATTTTGTTAAGAACTTCAAAGGAGCTGCCCAGATACTTGAGCAGAGGGGT
TACACTCAGTTCACCCCACACTATATAACTTGGTATTGTCCGGAAGCATT
TATTCTTAGCAAACAATGCAAGTCCCAGTGCATCAACCATGGTAGGTACT
GTGCGCCAGATCCTGAGCAGGACTTTAGCCGAGGGTATGATGGAAAGGAT
GTTGTGGTTCAAAATTTACGTCAAGCTTGCTTCTTTAAAGTGGCCAATGA
AAGCAGAAAGCCATGGCTTTGGTGGGACTATGTGACTGACTTTGCAATCC
GTTGCCCAATGAAAGAGAAGAAGTACACCAAGGAGTGTGCAGAGCAAGTT
ATCAAATCTCTTGGTGTTGACCTCAAGAAGGTAGATGAA
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