FC920497
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920497 vs. ExPASy Swiss-Prot
Match: HACL1_RAT (2-hydroxyacyl-CoA lyase 1 OS=Rattus norvegicus GN=Hacl1 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.607e-36 Identity = 77/215 (35.81%), Postives = 119/215 (55.35%), Query Frame = 3 Query: 66 QIDGNTLAAKSLSLFGATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVL---HQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIV 701 Q+ G + A++L +MFGVVGIPVT +A A +LG+++I NEQ LTG+PG+ L VSGPG +H L G++N +N WP+++I GS ++ G FQE QVEA + +SKF+ + I +P + + + ++ GRPG CY+D+P D++ T S+ ET S + A S+L+ AK+PL++ Sbjct: 16 QVSGAKVIAQALKTQDVEYMFGVVGIPVTEIALAAQELGIKYIGMRNEQAACYAASAVGYLTGRPGVCLVVSGPGLIHALGGMANANMNCWPLIVIGGSSERNQEAMGAFQEFPQVEACRLYSKFSARPSSIQHIPFVIEKAVRSSIYGRPGACYIDVPADLVTLQESTTSIKYKECCMPPPLSLAET--------SAVRAAASVLRSAKQPLLI 222
BLAST of FC920497 vs. ExPASy Swiss-Prot
Match: HACL1_MOUSE (2-hydroxyacyl-CoA lyase 1 OS=Mus musculus GN=Hacl1 PE=1 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 3.765e-35 Identity = 73/212 (34.43%), Postives = 117/212 (55.19%), Query Frame = 3 Query: 66 QIDGNTLAAKSLSLFGATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIV 701 Q+ G + A++L +MFGVVGIPVT +A A +LG+++I NEQ LTG+PG+ L VSGPG +H L G++N +N WP+++I GS ++ G FQE QVEA + ++KF+ + I +P + + + ++ GRPG CY+D+P D + +V + S + A S+L++AK+PL++ Sbjct: 16 QVSGAKVIAQALKTQDVEYMFGVVGIPVTEIALAAQELGIKYIGMRNEQAACYAASAVGYLTGRPGVCLVVSGPGLIHALGGMANANMNCWPLIVIGGSSERNQEAMGAFQEFPQVEACRLYTKFSARPSTIELIPFIIEKAVRSSIYGRPGACYIDIPADFVTLQANVTSIKYKECCMPPPVSMAE-----TSAVCAAASVLRDAKQPLLI 222
BLAST of FC920497 vs. ExPASy Swiss-Prot
Match: HACL1_HUMAN (2-hydroxyacyl-CoA lyase 1 OS=Homo sapiens GN=HACL1 PE=1 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 71/212 (33.49%), Postives = 117/212 (55.19%), Query Frame = 3 Query: 66 QIDGNTLAAKSLSLFGATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIV 701 Q+ G + A++L ++FG+VGIPVT +A A QLG+++I NEQ LT +PG+ L VSGPG +H L G++N +N WP+++I GS ++ G FQE QVEA + ++KF+ + I +P + + + ++ GRPG CY+D+P D ++ ++V I S + A S+++ AK+PL++ Sbjct: 13 QVSGAKVIAQALKTQDVEYIFGIVGIPVTEIAIAAQQLGIKYIGMRNEQAACYAASAIGYLTSRPGVCLVVSGPGLIHALGGMANANMNCWPLLVIGGSSERNQETMGAFQEFPQVEACRLYTKFSARPSSIEAIPFVIEKAVRSSIYGRPGACYVDIPADFVNLQVNVNSIKYMERCMSPPISMAE-----TSAVCTAASVIRNAKQPLLI 219
BLAST of FC920497 vs. ExPASy Swiss-Prot
Match: OXC_ECOLI (Probable oxalyl-CoA decarboxylase OS=Escherichia coli (strain K12) GN=oxc PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.284e-32 Identity = 80/219 (36.53%), Postives = 120/219 (54.79%), Query Frame = 3 Query: 51 NSQNAQIDGNTLAAKSLSLFGATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQK--DFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIV 701 + Q DG + ++L ++GVVGIPVT +A A G+R+I F +EQ LT KPGI LTVS PG ++GL L+N +N +P++MISGS D+ D +GD++ELDQ+ A KP++K A + ++ +A+ + +VSGRPGG YLDLP +VL T+ + + A+SLL +A++PLI+ Sbjct: 2 SDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAEGIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPGGVYLDLPANVLAATMEKDEALTTIVKVENPSPALLP---CPKSVTSAISLLAKAERPLII 217
BLAST of FC920497 vs. ExPASy Swiss-Prot
Match: OXC_ECO57 (Probable oxalyl-CoA decarboxylase OS=Escherichia coli O157:H7 GN=oxc PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.284e-32 Identity = 80/219 (36.53%), Postives = 120/219 (54.79%), Query Frame = 3 Query: 51 NSQNAQIDGNTLAAKSLSLFGATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQK--DFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIV 701 + Q DG + ++L ++GVVGIPVT +A A G+R+I F +EQ LT KPGI LTVS PG ++GL L+N +N +P++MISGS D+ D +GD++ELDQ+ A KP++K A + ++ +A+ + +VSGRPGG YLDLP +VL T+ + + A+SLL +A++PLI+ Sbjct: 2 SDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAEGIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPGGVYLDLPANVLAATMEKDEALTTIVKVENPSPALLP---CPKSVTSAISLLAKAERPLII 217
BLAST of FC920497 vs. ExPASy Swiss-Prot
Match: OXC_OXAFO (Oxalyl-CoA decarboxylase OS=Oxalobacter formigenes GN=oxc PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.626e-31 Identity = 75/220 (34.09%), Postives = 122/220 (55.45%), Query Frame = 3 Query: 51 NSQNAQI-DGNTLAAKSLSLFGATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQK--DFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIV 701 N N ++ DG + +L + M+GVVGIP+T+LA + G RF +F +EQ + GKPG+ LTVS PG ++G+ L++ N +P++++SGS +++ D +GD++E+DQ+ +P K + + I ++P +A+ + AVSGRPGG Y+DLP + QTISV I+ I +A L+K AK+P+I+ Sbjct: 3 NDDNVELTDGFHVLIDALKMNDIDTMYGVVGIPITNLARMWQDDGQRFYSFRHEQHAGYAASIAGYIEGKPGVCLTVSAPGFLNGVTSLAHATTNCFPMILLSGSSEREIVDLQQGDYEEMDQMNVARPHCKASFRINSIKDIPIGIARAVRTAVSGRPGGVYVDLPAKLFGQTISV---EEANKLLFKPIDPAPAQIPAEDAIARAADLIKNAKRPVIM 219
BLAST of FC920497 vs. ExPASy Swiss-Prot
Match: HACL1_DICDI (Probable 2-hydroxyacyl-CoA lyase 1 OS=Dictyostelium discoideum GN=hacl1 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.364e-29 Identity = 74/213 (34.74%), Postives = 107/213 (50.23%), Query Frame = 3 Query: 69 IDGNTLAAKSLSLFGATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSD--IDKAVSLLKEAKKPLIV 701 +DG + AKS+ +FG+VG+P+T +A GV F F NEQ LTG PG+ +TVSGPG VH LAG+ N N WP++++S S DQ G+G FQE Q E+ + + K +I P+ + +E ++S RPG Y+ +P D+ I T+ +V I AV LL EAK+PL++ Sbjct: 1 MDGVEIIAKSIKNSAIEKVFGIVGVPITPIAYELQAQGVGFFGFRNEQSCSYAASIVGYLTGLPGLCMTVSGPGVVHALAGVLNAQSNGWPMILLSSSIDQSLVGKGGFQECKQFESAELYCKKCYYLTEIDHFPEILKDAIETSLSNRPGPVYIQIPADL----IKSKCKESPNIREAAGYGTIAIKSVVPDMKLIKDAVQLLSEAKRPLVI 209
BLAST of FC920497 vs. ExPASy Swiss-Prot
Match: YEC0_YEAST (Putative 2-hydroxyacyl-CoA lyase OS=Saccharomyces cerevisiae GN=YEL020C PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.694e-27 Identity = 61/155 (39.35%), Postives = 86/155 (55.48%), Query Frame = 3 Query: 90 AKSLSLFGATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVL 554 A+ L +G +FG+VGIP+ LA+ V G++FI NEQ ++ KPG+LL V GPG +H LAG+ N M N WP+++I+GS Q D +G FQELDQV + PF KF K + + L + G G Y+D+P D + Sbjct: 10 AQLLQKYGIDTVFGIVGIPIVQLADTMVANGIKFIPCRNEQAASYAASAYGYISDKPGVLLIVGGPGLIHALAGIYNSMSNRWPLLVIAGSSSQSDIHKGGFQELDQVSLLSPFLKFTGKLTP-DNIDMITQKALNYCIQGTAGVSYIDVPADFI 163
BLAST of FC920497 vs. ExPASy Swiss-Prot
Match: YGK4_SCHPO (Putative 2-hydroxyacyl-CoA lyase OS=Schizosaccharomyces pombe GN=SPBC725.04 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.890e-27 Identity = 69/211 (32.70%), Postives = 104/211 (49.29%), Query Frame = 3 Query: 69 IDGNTLAAKSLSLFGATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIV 701 I + L AK+L +FG+VGIPV + G+RF+ F NEQ LT +PG+ + V GPG VH +AG+ N N WP+++++GS + G FQELDQV + P +K AV+ V + + +++G PG CY+DLP + + T+ I + + + + KA LK AK PL+V Sbjct: 3 ISFSELVAKTLLDLEVKVVFGIVGIPVIEICEAIQASGIRFVGFRNEQSAAYAATAYGYLTQRPGVCVVVGGPGVVHAMAGVFNSKTNRWPLLLLAGSSETFQQNCGAFQELDQVSYLSPHTKLAVRPPSPKMVVDSIRRAYRVSMTGTPGTCYVDLPANYIESTVD-----DFPKDPLPPIPSSPKCAPDPTQLQKAAYYLKNAKAPLLV 208
BLAST of FC920497 vs. ExPASy Swiss-Prot
Match: ILVI_BUCBP (Acetolactate synthase large subunit OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ilvI PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.452e-18 Identity = 61/211 (28.91%), Postives = 99/211 (46.92%), Query Frame = 3 Query: 69 IDGNTLAAKSLSLFGATHMFGVVGIPVTSLANLAVQL-GVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLI 698 + G+ + +SL G ++FG G V + + Q+ G++ I +EQ TGK G++L SGPG + + G++ +++ P+V+ISG G FQE D + +P K + K+ ++PK + A SGRPG +DLP D+L+ I V QG I KA+ +L +AK+P+I Sbjct: 4 LSGSDMVIRSLIDQGIKYIFGYPGGAVLDIYDSLKQMHGIKHILVRHEQSATHMADGYARATGKIGVVLVTSGPGATNSITGIATAYMDSIPLVVISGQVASSLIGYDAFQECDMIGISRPIVKHSFLVKNTEDIPKIFKKAFWLASSGRPGPIVIDLPKDILNPLIK-KPYIWPKLISIRSYSPVLQGH--QGQIKKALHILIKAKQPII 211 The following BLAST results are available for this feature:
BLAST of FC920497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920497 ID=FC920497; Name=FC920497; organism=Citrus clementina; type=EST; length=702bpback to top |