FC920535

Overview
NameFC920535
Unique NameFC920535
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12500 contig Ccv1_Contig12500:1..655. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920535 vs. ExPASy Swiss-Prot
Match: UFOG_PETHY (Anthocyanidin 3-O-glucosyltransferase OS=Petunia hybrida GN=RT PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.218e-61
Identity = 122/189 (64.55%), Postives = 142/189 (75.13%), Query Frame = 3
Query:  102 DQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSEMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTHYWLPGLVGSQLGIKTVNFSVFSAISQAYLVVPARKLN----NSLADLMKSPDGFPATSITSLDEFVARDYLYVY 656
            D LHVVMFP+FAFGHISPFVQL+NKLS +GVKVSFF+A GN  R+KS LN  P   I+PL +PHV+GLPPG +ST+E+TP  AELLK ALDLMQPQIKTLLS LKPHFV FDF   WLP +    LGIKTV +SV  A+S A+L  PAR L      SL D+ K P GFP TS+TS+  F ARD+LYV+
Sbjct:   10 DALHVVMFPFFAFGHISPFVQLANKLSSYGVKVSFFTASGNASRVKSMLNSAPTTHIVPLTLPHVEGLPPGAESTAELTPASAELLKVALDLMQPQIKTLLSHLKPHFVLFDFAQEWLPKMANG-LGIKTVYYSVVVALSTAFLTCPARVLEPKKYPSLEDMKKPPLGFPQTSVTSVRTFEARDFLYVF 197          
BLAST of FC920535 vs. ExPASy Swiss-Prot
Match: FLRT_CITMA (Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase OS=Citrus maxima GN=C12RT1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.492e-11
Identity = 42/153 (27.45%), Postives = 73/153 (47.71%), Query Frame = 3
Query:   87 ESAEADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSL--NLTPMADIIPLQIPHV-DGLPPGLDSTSEMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTHYWLPGLVGSQLGIKTVNFSVFSAISQAYLV 536
            ++   D+  ++M PW A GHI+P ++L+ KLS     + F S P N+     ++  N +    +I LQ+P+    LP    +T  + PH+   L  A +  +P    +L  LKP  V +D     +      Q  I  + F   SA++ ++L+
Sbjct:    2 DTKHQDKPSILMLPWLAHGHIAPHLELAKKLSQKNFHIYFCSTPNNLQSFGRNVEKNFSSSIQLIELQLPNTFPELPSQNQTTKNLPPHLIYTLVGAFEDAKPAFCNILETLKPTLVMYDLFQP-MAAEAAYQYDIAAILFLPLSAVACSFLL 153          
The following BLAST results are available for this feature:
BLAST of FC920535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
UFOG_PETHY1.218e-6164.55Anthocyanidin 3-O-glucosyltransferase OS=Petunia h... [more]
FLRT_CITMA7.492e-1127.45Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltran... [more]
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Properties
Property NameValue
Genbank descriptionC32009F07EF RVDevelop1 Citrus clementina cDNA clone C32009F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920535 ID=FC920535; Name=FC920535; organism=Citrus clementina; type=EST; length=658bp
GAAAAAAATTAATCAACAAAGAAAACGGCCAGAGAGAGACAGAGACCATG
CACGCCCCTTCGAACCAACACCACAAAATGGGAACTGAATCAGCTGAAGC
TGATCAACTTCACGTGGTGATGTTCCCATGGTTTGCTTTTGGTCACATAA
GCCCCTTTGTACAACTTTCCAACAAGCTCTCACTTCATGGAGTCAAGGTC
TCTTTCTTTTCGGCTCCTGGTAACATTCCCCGCATCAAATCATCGCTCAA
TTTAACTCCCATGGCCGACATTATCCCTCTTCAAATCCCACACGTCGATG
GCCTCCCTCCTGGTCTTGATAGCACCTCAGAGATGACACCTCACATGGCT
GAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCAAAACTTT
GTTGTCGCAGCTCAAACCACATTTTGTGTTCTTTGATTTTACCCATTACT
GGTTGCCGGGTCTTGTTGGTTCTCAACTTGGCATCAAAACCGTTAACTTC
TCTGTTTTCTCTGCCATTTCACAAGCCTATCTCGTGGTCCCCGCCAGGAA
ACTCAACAACAGTTTAGCAGATCTAATGAAATCTCCCGATGGGTTCCCTG
CAACTTCCATTACCTCGCTCGATGAATTTGTGGCTCGAGATTACTTGTAT
GTTTATAC
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