FC920597

Overview
NameFC920597
Unique NameFC920597
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length668
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC920597 vs. ExPASy Swiss-Prot
Match: AI5L5_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 5 OS=Arabidopsis thaliana GN=ABF2 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.997e-19
Identity = 63/157 (40.13%), Postives = 79/157 (50.32%), Query Frame = 2 
Query:  149 QAQRQQTLGEMTLEEFLVRAGVVREDLQFXXXXXXXXXXXXXLFGDLSRSANNTGMGIGFQQMGK---GASLMGNRNLETGNQINIQSSNLPLNVNGARMNXXXXXXXXXXXXXXXXXXXXXXXXXXXAMAYATQMPLQSSPGIK-SGIVVVGDQAM 607
            Q+QRQQTLGE+TLEEFLVRAGVVRE+ Q               FG+ +    NTG  + FQQ       A +MGN   ET N + +Q S+LPLNVNGAR                                Y TQM   +SPGI+  G+V +GDQ++
Sbjct:  129 QSQRQQTLGEVTLEEFLVRAGVVREEAQVAARAQIAENNKGGYFGNDA----NTGFSVEFQQPSPRVVAAGVMGNLGAETANSLQVQGSSLPLNVNGARTT------------YQQSQQQQPIMPKQPGFGYGTQMGQLNSPGIRGGGLVGLGDQSL 269
The following BLAST results are available for this feature:
BLAST of FC920597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AI5L5_ARATH9.997e-1940.13ABSCISIC ACID-INSENSITIVE 5-like protein 5 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionC32010E06EF RVDevelop1 Citrus clementina cDNA clone C32010E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920597 ID=FC920597; Name=FC920597; organism=Citrus clementina; type=EST; length=668bp
AACGAACCACCAAATGACGTCGGTAAACCGCCGGGGAATATTCCGTTAAC
AAGGCAATCATCGGTGTATTCGTTAACATTTGAGGAGTTCCAAAATACTG
TAGGTGGGATGGGTAAAGATTTTGGGTCAAGGACCGAATAATATGCCACA
GGCACAGAGGCAGCAGACTTTGGGGGAAATGACGTTGGAGGAGTTTTTGG
TGAGAGCTGGCGTTGTTAGGGAGGATTTACAGTTTGGTGGTGGTGTTGGT
GGCAAGGTTAATGGTAATAGTGGGCTTTTTGGTGATTTATCACGGTCAGC
TAATAATACTGGAATGGGAATTGGGTTTCAGCAGATGGGTAAGGGTGCAA
GTCTGATGGGAAATCGTAACCTGGAGACTGGTAATCAGATTAATATTCAG
TCTTCGAATTTGCCTTTGAATGTTAATGGGGCTAGAATGAACCAGCATCC
CCTAGCTCAGCAGCAGCATAACCAGCAGACACAGCAACAGCCACAACAGC
CGCAAATATTTCCCAAGCAGCCTGCTATGGCGTATGCTACTCAGATGCCT
TTACAGAGTAGTCCAGGAATTAAGAGCGGAATTGTGGTAGTAGGTGATCA
GGCAATGAATGGTAATTTGATTCAGGGTGGTGCACTTCAGGGTGGAGGGA
TGGGAATGGTTGGGTTGG
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