FC920606
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920606 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2) HSP 1 Score: 209.149 bits (531), Expect = 1.812e-53 Identity = 102/208 (49.04%), Postives = 141/208 (67.79%), Query Frame = 2 Query: 41 MSKGPGLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVGEITRRFST 664 M KGPGL+ DIGKKA+DLL KDY++D+K +ISTYS GVA+TS+ KKG L GDV Q K KN+ D+KVDT SN+ TT T+ E P KAI S KVP+ SGK+E+QY H++A +S++ L +P ++ ++ IGT ++AFGA+ +DT G TK A ++ K D S+ L +KGD + ASY H ++ L +A +I+ RFST Sbjct: 1 MVKGPGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNKNITTDIKVDTNSNLFTTITVNEPAPGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVGLKANPIVNFSSVIGTNALAFGADISFDTKLGELTKSNAAVNFVKDDLIGSLTLNEKGDLLSASYYHAINPLSNTAVGVDISHRFST 208
BLAST of FC920606 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=At3g01280 PE=1 SV=3) HSP 1 Score: 207.223 bits (526), Expect = 6.887e-53 Identity = 102/208 (49.04%), Postives = 144/208 (69.23%), Query Frame = 2 Query: 41 MSKGPGLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVGEITRRFST 664 M KGPGL+ +IGKKA+DLL KD+N+DQK SI+T+S AGVA+TST KKG L GDVA Q + KN+ D+KV T+S L T T+ E P ++I S KVPD NSGK+E+QY H++A ++++ L Q+P ++ + IG+ +A G + +DT SGNFTK AG+S TK D AS+ + DKGD + ASY H ++ L +A E++ + S+ Sbjct: 1 MVKGPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLNASYYHIVNPLFNTAVGAEVSHKLSS 208
BLAST of FC920606 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 205.682 bits (522), Expect = 2.004e-52 Identity = 102/208 (49.04%), Postives = 133/208 (63.94%), Query Frame = 2 Query: 41 MSKGPGLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVGEITRRFST 664 M KGPGL+ +IGKKA+DLL KDY +D K SI+TYS GV +TS+ KKG L DV Q K KNV D+KVDT SN+ TT T+ E P K I S +VPD SGKLEVQY HD+A +++ L +P ++ + +GT IA G + +DT +G+FTK AG+S T D AS+ L +KGD + ASY H + L +A E+ FST Sbjct: 1 MGKGPGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVTTDIKVDTNSNLFTTITVDEAAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNLTASYYHTVSPLTSTAVGAEVNHSFST 208
BLAST of FC920606 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 1.696e-51 Identity = 101/221 (45.70%), Postives = 141/221 (63.80%), Query Frame = 2 Query: 41 MSKGPGLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVGEITRRFSTMRILLQLEDHMLL 703 M KGPGL++DIGKKA+DLL +DY +D K +++TYS GVA+T++ +KKG L DV+ Q K KN+ DVKVDT SN+ TT T+ E P K I S VPD SGK+E+QY H++A ++I L SP ++ + G ++A G + +DT +GNFTK AG+S + D AS+ L DKGDT+ ASY H + + +A E+T FS+ L + LL Sbjct: 1 MVKGPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNKNITTDVKVDTNSNVYTTITVDEPAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIGLTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTVSASYYHTVKPVTNTAVGAELTHSFSSNENTLTIGTQHLL 221
BLAST of FC920606 vs. ExPASy Swiss-Prot
Match: VDAC2_ARATH (Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=HSR2 PE=1 SV=3) HSP 1 Score: 196.438 bits (498), Expect = 1.216e-49 Identity = 98/209 (46.89%), Postives = 133/209 (63.64%), Query Frame = 2 Query: 41 MSKGPGLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVG-EITRRFST 664 M KGPGL+ +IGKKA+DLL +DY DQK S++TYS GVA+T+T KG L GDVA Q K N DVKV T+S++LTT T E P K I K+PD+ SGK EVQYFHD+A ++++ +P ++ + +GT ++ G + Y+T SGNF + AG + TK D AS+IL DKG+ + ASY + S VG EI+ F+T Sbjct: 1 MVKGPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKLNASY---YQIVSPSTVVGAEISHNFTT 206
BLAST of FC920606 vs. ExPASy Swiss-Prot
Match: VDAC1_ORYSJ (Mitochondrial outer membrane protein porin OS=Oryza sativa subsp. japonica GN=VDAC1 PE=1 SV=3) HSP 1 Score: 193.356 bits (490), Expect = 1.029e-48 Identity = 92/205 (44.88%), Postives = 140/205 (68.29%), Query Frame = 2 Query: 50 GPGLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVGEITRRFST 664 GPGL+ +IGKKA+DLL +DY D K +++TY+ GVA+T+T+ KK L G++ +Q K KN+ DVK +++SN++TT T+ E+ P K+I S VPD SGK E+QY HD+A +++I L SP +++++ GT ++A GA+ DT +GN TKY AG+S + D AS+ L +KGD++ ASY +H+ N +A E+T FS+ Sbjct: 3 GPGLYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNKNITVDVKANSDSNVVTTVTVDELTPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIGLTASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYNAGLSFSNDDLIASLNLNNKGDSLTASY-YHIVNHSATAVGAELTHSFSS 206
BLAST of FC920606 vs. ExPASy Swiss-Prot
Match: VDAC1_WHEAT (Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.817e-45 Identity = 91/207 (43.96%), Postives = 135/207 (65.22%), Query Frame = 2 Query: 50 GPGLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEIL-PSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVG-EITRRFST 664 GPGL++ IGKKAKDLL +DY D K +++TY+ G A+T+T+ KK L+ G++ +Q K KN+ DVK ++ SN++TT T ++ P K I S VPD SGK+E+QY HD+A ++I L +P ++++ GT ++A GA+ DT + NF KY A +S T D AS+ L +KGD++ ASY H ++ K AVG E+T FS+ Sbjct: 3 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSGAFGTSALAVGADVSLDTATKNFAKYNAALSYTNQDLIASLNLNNKGDSLTASYYHIVE--KSGTAVGAELTHSFSS 207
BLAST of FC920606 vs. ExPASy Swiss-Prot
Match: VDAC_MAIZE (Outer plastidial membrane protein porin OS=Zea mays GN=POR1 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 7.898e-41 Identity = 83/203 (40.89%), Postives = 127/203 (62.56%), Query Frame = 2 Query: 56 GLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEI-LPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVGEITRRFS 661 GL+ DIGKK +DLL KDYN QK ++T S GVA+T+ +K G++ Q K K + DVK ++ES++LTT T+ E P K+I +L VPD SGKLE QY H++A +++ LN +P ++++ G+ +++ G + +DT + +FTKY A +S+T PD AS+ L + GDT+ ASY H + N +A E++ S Sbjct: 6 GLYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKLTVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLNSNPMVNLSGAFGSKALSVGVDVSFDTATSDFTKYNAALSLTSPDLIASLHLNNHGDTLVASYYHLVKNHSGTAVGAELSHSMS 208 The following BLAST results are available for this feature:
BLAST of FC920606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920606 ID=FC920606; Name=FC920606; organism=Citrus clementina; type=EST; length=704bpback to top |