FC920632

Overview
NameFC920632
Unique NameFC920632
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14171 contig Ccv1_Contig14171:1..724. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920632 vs. ExPASy Swiss-Prot
Match: EMB8_PICGL (Embryogenesis-associated protein EMB8 OS=Picea glauca GN=EMB8 PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.795e-77
Identity = 131/199 (65.83%), Postives = 156/199 (78.39%), Query Frame = 1
Query:    4 GALHTFLPALKTLSRPYGPFPVIGWNCHVETIFAAFFRSLPDIKLKRECIRTKDDGSVALDW-ISG-DHQL----LPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILVRYLGHESHSCPLSGAVSLCNPFNLVIADQDF 582
            G+    +  L TL RPY  FP +G N HVETIFA+FFRS P IK +REC+R +D G+V LDW + G D +L    LP +SPVLIL+PGLTGGS+DSYV+HMLLRAR  GW  VVFNSRGC DSPVTTPQFYSASF  D+ +VV HV  ++ ++++YAVGWSLGANILVRYLG  + +CPLSGAVSLCNPFNLVIAD+DF
Sbjct:   72 GSDRELMSKLTTLGRPYRHFPFMG-NRHVETIFASFFRSWPVIKSRRECLRMEDGGTVELDWPLEGEDAELWNGELPVNSPVLILLPGLTGGSDDSYVKHMLLRARKHGWHSVVFNSRGCADSPVTTPQFYSASFTKDLCQVVKHVAVRFSESNIYAVGWSLGANILVRYLGEVAGNCPLSGAVSLCNPFNLVIADEDF 269          

HSP 2 Score: 53.5286 bits (127), Expect = 1.795e-77
Identity = 27/43 (62.79%), Postives = 30/43 (69.77%), Query Frame = 3
Query:  570 RSRFP-HALLFEDMGGEFNIPLAANAKSVRQFDDGLTRXSFGF 695
            R  FP H  LFE + GE+NIP  A A+SVR FD GLTR SFGF
Sbjct:  288 RQIFPKHTRLFEGIEGEYNIPTVAKARSVRDFDGGLTRVSFGF 330          

HSP 3 Score: 23.0978 bits (48), Expect = 1.795e-77
Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 2
Query:  692 FQSVDDYYSN 721
            FQSV DYYSN
Sbjct:  330 FQSVGDYYSN 339          
BLAST of FC920632 vs. ExPASy Swiss-Prot
Match: ABHD3_HUMAN (Abhydrolase domain-containing protein 3 OS=Homo sapiens GN=ABHD3 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.985e-26
Identity = 65/199 (32.66%), Postives = 102/199 (51.26%), Query Frame = 1
Query:   76 WNCHVETIFAAFFRSLPDIKLKRECIRTKDDGSVALDWISGDHQLLPPDS---PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILVRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRMLFSLKTWVVNLIFRWQLMPSLSGSL 663
            W    +T+   F  S P ++ + E I+T D G ++LDW   D+     D+   P ++L+PGLTG S++SY+ HM+  +   G+R VVFN+RG     + TP+ Y  +   D++ V+ HV S YP A   A G S+G  +L+ YLG      PL  A +    +N     +      SL+  +  L+F + L   L  S+
Sbjct:   87 WEGRGQTLLRPFITSKPPVQYRNELIKTADGGQISLDWFDNDNSTCYMDASTRPTILLLPGLTGTSKESYILHMIHLSEELGYRCVVFNNRGVAGENLLTPRTYCCANTEDLETVIHHVHSLYPSAPFLAAGVSMGGMLLLNYLGKIGSKTPLMAAATFSVGWNTFACSE------SLEKPLNWLLFNYYLTTCLQSSV 279          

HSP 2 Score: 23.483 bits (49), Expect = 1.985e-26
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 3
Query:  642 AKSVRQFDDGLTRXSFGF 695
            AKS+R+FD   T   FG+
Sbjct:  298 AKSIREFDKRFTSVMFGY 315          
BLAST of FC920632 vs. ExPASy Swiss-Prot
Match: ABHD3_MOUSE (Abhydrolase domain-containing protein 3 OS=Mus musculus GN=Abhd3 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.376e-26
Identity = 65/199 (32.66%), Postives = 102/199 (51.26%), Query Frame = 1
Query:   76 WNCHVETIFAAFFRSLPDIKLKRECIRTKDDGSVALDWISGDHQLLPPDS---PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILVRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRMLFSLKTWVVNLIFRWQLMPSLSGSL 663
            W    +T+   F  S P ++ + E I+T D G ++LDW   ++     D+   P ++L+PGLTG S++SY+ HM+  +   G+R VVFN+RG     + TP+ Y  +   D++ VV HV S YP A   A G S+G  +L+ YLG      PL  A +    +N     +      SL+  +  L+F + L   L  S+
Sbjct:   87 WESRGQTLLRPFITSKPPVQYRNELIKTADGGQISLDWFDNNNSAYYVDASTRPTILLLPGLTGTSKESYILHMIHLSEELGYRCVVFNNRGVAGESLLTPRTYCCANTEDLEAVVHHVHSLYPGAPFLAAGVSMGGMLLLNYLGKIGSKTPLMAAATFSVGWNTFACSE------SLERPLNWLLFNYYLTTCLQSSV 279          

HSP 2 Score: 23.483 bits (49), Expect = 4.376e-26
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 3
Query:  642 AKSVRQFDDGLTRXSFGF 695
            AKS+R+FD   T   FG+
Sbjct:  298 AKSIREFDKRFTAVMFGY 315          
BLAST of FC920632 vs. ExPASy Swiss-Prot
Match: ABHD3_BOVIN (Abhydrolase domain-containing protein 3 OS=Bos taurus GN=ABHD3 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.796e-26
Identity = 66/199 (33.17%), Postives = 101/199 (50.75%), Query Frame = 1
Query:   76 WNCHVETIFAAFFRSLPDIKLKRECIRTKDDGSVALDWISGD---HQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILVRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRMLFSLKTWVVNLIFRWQLMPSLSGSL 663
            W    +T+   F  S P ++ + E I+T D G ++LDW   D   H +     P ++L+PGLTG S++SY+ HM+  +   G+R VVFN+RG     + TP+ Y  S   D++ V+ HV S YP A   A G S+G  +L+ YLG      PL  A +    +N     +      SL+  +  L+F + L   L  S+
Sbjct:   87 WESRGQTLLRPFITSKPLVQYRNELIKTADGGQISLDWFDNDNSKHYMDASTRPTVLLLPGLTGTSKESYILHMIHLSEELGYRYVVFNNRGVAGENLLTPRTYCCSNTEDLETVIHHVHSLYPSAPFLAAGVSMGGMLLLNYLGKIGPKTPLKAAATFSVGWNTFACSE------SLEKPLNWLLFNYYLTTCLQSSV 279          
BLAST of FC920632 vs. ExPASy Swiss-Prot
Match: ABHD1_BOVIN (Abhydrolase domain-containing protein 1 OS=Bos taurus GN=ABHD1 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.413e-24
Identity = 63/190 (33.16%), Postives = 105/190 (55.26%), Query Frame = 1
Query:   88 VETIFAAFFRSLPDIKLKRECIRTKDDGSVALDWISGDHQLLPPDS--PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILVRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRMLFSLKTWVVNLIFRWQLMPSL 651
            ++TIF    +S P +    E + T D G + LDW S  +   P  S  P ++L+PG+TG S+++Y+ H++ +A   G+R VVFN+RGC    + T + + AS   D+  V+ H+ S+YP+A L AVG SLG  +++ +L     +  L  A++L   ++       F    SL+T + +L+F  +L   L
Sbjct:   74 LQTIFRVLLQSRPVVPYSSEVLETPDGGQILLDWASQSNSQYPDPSTQPTVLLLPGITGSSQETYILHLVDQALKDGYRAVVFNNRGCRGEELLTHRAFCASNTEDLVTVINHIKSRYPQAPLLAVGISLGGILVLNHLARTGRAAGLVAALTLSACWD------SFETTRSLETPLNSLLFNHRLTAGL 257          
BLAST of FC920632 vs. ExPASy Swiss-Prot
Match: ABHD1_RAT (Abhydrolase domain-containing protein 1 OS=Rattus norvegicus GN=Abhd1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.031e-22
Identity = 60/191 (31.41%), Postives = 102/191 (53.40%), Query Frame = 1
Query:   88 VETIFAAFFRSLPDIKLKRECIRTKDDGSVALDWISGDHQLLPPD---SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILVRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRMLFSLKTWVVNLIFRWQLMPSL 651
            ++TIF    +S P I  + E ++T D G   LDW    +    PD    P+++L+PG++G S++ Y+ H++ +A   G+R VVFN+RGC    + T + Y AS   D++ VV H+  +Y +A L AVG S G  +++ YL     +  L   +++   ++       F  + SL+T + +L+F   L   L
Sbjct:   82 LQTIFRVLLQSQPVIPYRSEVLQTPDGGQFLLDWAEQPYSSHCPDPTTQPIVLLLPGISGSSQEPYILHLVDQALKDGYRAVVFNNRGCRGEELLTHRAYCASNTEDLETVVKHIKHRYSRAPLLAVGISFGGILVLNYLARTGKAGGLVAGLTMSACWD------SFETVDSLETPLNSLLFNQPLTAGL 266          
BLAST of FC920632 vs. ExPASy Swiss-Prot
Match: ABHD1_MOUSE (Abhydrolase domain-containing protein 1 OS=Mus musculus GN=Abhd1 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 5.031e-22
Identity = 59/191 (30.89%), Postives = 102/191 (53.40%), Query Frame = 1
Query:   88 VETIFAAFFRSLPDIKLKRECIRTKDDGSVALDWI---SGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILVRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRMLFSLKTWVVNLIFRWQLMPSL 651
            ++TIF    +S P +  + E ++T D G   LDW    +  H   P   P+++L+PG++G S++ Y+ H++ +A   G+R VVFN+RGC    + T + Y AS   D++ VV H+  +Y +A L AVG S G  +++ YL     +  L   +++   ++       F  + SL+T + +L+F   L   L
Sbjct:   82 LQTIFRVLLQSQPVVPYRSEVLQTPDGGQFLLDWAEQPNSTHYPDPTTQPIVLLLPGISGSSQEPYILHLVNQALKDGYRAVVFNNRGCRGEELLTHRAYCASNTEDLETVVKHIKRRYSQAPLLAVGISFGGILVLNYLAQTGKAGGLVAGLTMSACWD------SFETVDSLETPLNSLLFNQPLTAGL 266          
BLAST of FC920632 vs. ExPASy Swiss-Prot
Match: ABHD1_HUMAN (Abhydrolase domain-containing protein 1 OS=Homo sapiens GN=ABHD1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.582e-22
Identity = 59/191 (30.89%), Postives = 104/191 (54.45%), Query Frame = 1
Query:   88 VETIFAAFFRSLPDIKLKRECIRTKDDGSVALDWISGDHQLLPPD---SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILVRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRMLFSLKTWVVNLIFRWQLMPSL 651
            +++IF    +S P +  + + ++T D G + LDW         PD    P+++L+PG+TG S+++YV H++ +A   G++ VVFN+RGC    + T + + AS   D++ VV H+  +YP+A L AVG S G  +++ +L     +  L  A++L   ++       F    SL+T + +L+F   L   L
Sbjct:   74 LQSIFQVLLQSQPLVLYQSDILQTPDGGQLLLDWAKQPDSSQDPDPTTQPIVLLLPGITGSSQETYVLHLVNQALRDGYQAVVFNNRGCRGEELRTHRAFCASNTEDLETVVNHIKHRYPQAPLLAVGISFGGILVLNHLAQARQAAGLVAALTLSACWD------SFETTRSLETPLNSLLFNQPLTAGL 258          
BLAST of FC920632 vs. ExPASy Swiss-Prot
Match: YYC5_CAEEL (Putative esterase C44C1.5 OS=Caenorhabditis elegans GN=C44C1.5 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.265e-21
Identity = 59/203 (29.06%), Postives = 99/203 (48.77%), Query Frame = 1
Query:   31 LKTLSRPYGPFPVIGWNCH---VETIFAAFFRSLPDIKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDS-YVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILVRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRMLFSLKTWVVNLIF 627
            L+ L + Y P     W C     +T+    FR  P +   RE +   D G+  +DW+  +       +P+++ +PG+TG + DS YV H +  AR KGW+ VV N RG G   + T + Y+A+   D   +   +  +YP A     G+S+G  IL  YL     +  L G + + +P++ ++A        S++ ++  LIF
Sbjct:   46 LRILEQKYHP----SWWCPFGTTQTVVRQIFRDCPSLPFTREIVEFDDGGAAGIDWLIPEGA--DDTTPIVVFLPGITGSTHDSSYVLHPVKEARDKGWKCVVVNPRGLGGVKLRTTRTYNAATPHDFAFIAKMINERYPDAKKLGCGFSMGGMILWNYLAMTGENADLDGGMIVSSPWDPLVASD------SIECFIPQLIF 236          
BLAST of FC920632 vs. ExPASy Swiss-Prot
Match: MCFS2_YEAST (Medium-chain fatty acid ethyl ester synthase/esterase 2 OS=Saccharomyces cerevisiae GN=EHT1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.207e-19
Identity = 53/138 (38.41%), Postives = 82/138 (59.42%), Query Frame = 1
Query:  205 QLLPPDSPVLILMPGLTGGSEDSYVRHMLLR-ARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILVRYLGHESHSCPLSGAVSLCNPFNLVIA----DQDF--RMLFS 597
            +L   D P+++++ GL GGS +  +R +    +RS  ++VVV N+RGC  S +TT   ++A    D++E +     ++P   LYAVG S GA +L  YLG E    PLS A +LCNP++L+++     QD+  R LFS
Sbjct:  159 ELREVDLPLVVILHGLAGGSHEPIIRSLAENLSRSGRFQVVVLNTRGCARSKITTRNLFTAYHTMDIREFLQREKQRHPDRKLYAVGCSFGATMLANYLGEEGDKSPLSAAATLCNPWDLLLSAIRMSQDWWSRTLFS 296          
The following BLAST results are available for this feature:
BLAST of FC920632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
EMB8_PICGL1.795e-7765.83Embryogenesis-associated protein EMB8 OS=Picea gla... [more]
ABHD3_HUMAN1.985e-2632.66Abhydrolase domain-containing protein 3 OS=Homo sa... [more]
ABHD3_MOUSE4.376e-2632.66Abhydrolase domain-containing protein 3 OS=Mus mus... [more]
ABHD3_BOVIN9.796e-2633.17Abhydrolase domain-containing protein 3 OS=Bos tau... [more]
ABHD1_BOVIN2.413e-2433.16Abhydrolase domain-containing protein 1 OS=Bos tau... [more]
ABHD1_RAT5.031e-2231.41Abhydrolase domain-containing protein 1 OS=Rattus ... [more]
ABHD1_MOUSE5.031e-2230.89Abhydrolase domain-containing protein 1 OS=Mus mus... [more]
ABHD1_HUMAN8.582e-2230.89Abhydrolase domain-containing protein 1 OS=Homo sa... [more]
YYC5_CAEEL7.265e-2129.06Putative esterase C44C1.5 OS=Caenorhabditis elegan... [more]
MCFS2_YEAST5.207e-1938.41Medium-chain fatty acid ethyl ester synthase/ester... [more]

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Properties
Property NameValue
Genbank descriptionC32011A07EF RVDevelop1 Citrus clementina cDNA clone C32011A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920632 ID=FC920632; Name=FC920632; organism=Citrus clementina; type=EST; length=723bp
GGTGGTGCACTTCACACCTTCCTTCCAGCTCTCAAGACACTGAGCCGTCC
GTATGGTCCGTTTCCGGTAATTGGTTGGAACTGCCACGTGGAGACTATAT
TCGCCGCGTTCTTTCGGTCTCTCCCAGACATCAAGCTCAAGCGGGAATGT
ATCCGAACCAAAGACGACGGCTCCGTCGCTCTCGACTGGATCTCCGGCGA
CCACCAACTCTTGCCTCCCGATTCTCCCGTCCTCATTTTGATGCCAGGTT
TAACAGGAGGGAGTGAGGATTCATACGTCAGGCATATGCTACTTAGAGCG
AGAAGTAAGGGGTGGCGAGTTGTGGTGTTCAATAGTCGAGGTTGCGGAGA
TAGCCCTGTTACAACTCCTCAGTTCTATTCGGCTTCATTTTTAGGAGATA
TGCAAGAAGTAGTAGCACATGTTGGATCCAAGTACCCAAAAGCCCATTTG
TATGCAGTTGGATGGTCTCTGGGGGCAAATATTCTTGTTCGTTATTTGGG
TCATGAATCTCACAGTTGCCCTCTTTCTGGGGCTGTTTCACTGTGTAATC
CATTCAATTTGGTCATTGCAGATCAAGATTTCCGCATGCTCTTCTCTTTG
AAGACATGGGTGGTGAATTTAATATTCCGCTGGCAGCTAATGCCAAGTCT
GTCAGGCAGTTTGATGATGGATTGACCCGTGNTTCATTTGGTTTCAGTCA
GTGGATGACTACTACTCTAATTC
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