FC920654

Overview
NameFC920654
Unique NameFC920654
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9492 contig Ccv1_Contig9492:20..684. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 318.546 bits (815), Expect = 1.893e-86
Identity = 150/182 (82.42%), Postives = 168/182 (92.31%), Query Frame = 3
Query:  120 EEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHCVKL 665
            E +PGL+MNFYKDTCPQAEDI++EQVKLLYKRHKNTAFSWLRNIFHDCAV+SCDASLLLDSTR+ L EKE DRSFG+RNFRYIE IKEA+ERECPGVVSC+DILVLS R+G+ A+GGPYIPLKTGRRDG KSR ++LE YLPDH +S+SVVLE+F +IGID PGLVALL SHSVGRTHCVKL
Sbjct:   26 EAEPGLMMNFYKDTCPQAEDIVREQVKLLYKRHKNTAFSWLRNIFHDCAVESCDASLLLDSTRRELGEKEHDRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKL 207          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.042e-56
Identity = 105/178 (58.99%), Postives = 136/178 (76.40%), Query Frame = 3
Query:  135 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIP-LKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHCVKL 665
            L MN+YK++CP+AE+II++QV+ LY +H NTA SWLRN+FHDC V+SCDASLLL++ R   SE++  RSFGMRNF+Y++ IK+A+E+ECP  VSCADI+ LS RDG+V L GP I  +KTGRRD R S    +E  +P+H DS+S V+  F +IGID    VALL +HSVGR HCV L
Sbjct:   30 LEMNYYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLLLETARGVESEQKSKRSFGMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVGRVHCVNL 207          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 147.517 bits (371), Expect = 5.780e-35
Identity = 68/171 (39.77%), Postives = 109/171 (63.74%), Query Frame = 3
Query:  144 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            ++Y+++CP AE II + ++ +Y    + A   +R +FHDC ++ CDAS+LLD+     SEK+   +  ++ F  I+ +K  +E  CPGVVSCAD+LVL+ R+ V+  GGP+ PL+TGR+D   +  +  E  LP    ++SV+L+RF+  G +    V+L  +HS+G THC
Sbjct:   71 DYYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDADEAHTSEKDASPNLSLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNERETVSLFGAHSIGITHC 241          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.574e-32
Identity = 62/179 (34.64%), Postives = 106/179 (59.22%), Query Frame = 3
Query:  123 EDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            +D  L +++YK TCP   D+IK++++ + K     A   +R  FHDC VQ CD S+LLD T     EK+   +   ++ ++ ++ IK  +E ECPGVVSCAD+L +  RD  + +GGPY  +  GR+D + +  E+    LP  ++ +  ++ +F + G+    +VAL+ +H++G+  C
Sbjct:   26 KDLPLTLDYYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVEDMVALIGAHTIGKAQC 204          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.020e-31
Identity = 71/175 (40.57%), Postives = 95/175 (54.29%), Query Frame = 3
Query:  135 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM-DRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            L  NFY  +CP     ++  VK           S LR  FHDC V  CD S+LLD T     E+         R F  I+NIK AVE+ CPGVVSCADIL ++ RD VVALGGP   +K GRRD R +        +P    S+S ++  F+A+G+    +VAL  +H++G++ C
Sbjct:   30 LTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAAPNRNSARGFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRC 204          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.877e-31
Identity = 70/178 (39.33%), Postives = 104/178 (58.43%), Query Frame = 3
Query:  132 GLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHCVKL 665
            GL + FY   CP+AE I+K+ V    K  +  A   LR  FHDC V+ C+ S+LL+   K   EK    +  +R F  I+N+K A+E+ECPG+VSC+D+L L  RD +VAL GP   ++TGRRDG  +        LP   +++S ++ +F + G+D   LV L   H++G  HC ++
Sbjct:   31 GLKVGFYDKACPKAELIVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLELKNKK-DEKNSIPNLTLRGFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGLDKKDLVVLSGGHTIGNGHCPQI 207          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.064e-31
Identity = 67/175 (38.29%), Postives = 100/175 (57.14%), Query Frame = 3
Query:  132 GLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            GL M +Y  +CP AE I+K  V    +     A   +R +FHDC ++ CDAS+LLDST+   +EK+   +  +R +  I++ KE +E  CPGVVSCADI+ ++ RD V   GGPY  +  GR DG++S+ E     LP    + S +++ F   G     +VAL  +H++G   C
Sbjct:   25 GLSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEKDSPANLSLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGKRSKIEDTRN-LPSPFLNASQLIQTFGQRGFTPQDVVALSGAHTLGVARC 198          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.613e-31
Identity = 73/174 (41.95%), Postives = 98/174 (56.32%), Query Frame = 3
Query:  135 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            L   FY ++CP AE I++  V+  + R  +   +  R  FHDC VQ CDASLL+D T   LSEK    +F +R F  I+ IK A+E +CP  VSC+DI+ L+ RD V   GGP   + TGRRDG  S  E   + LP    S+  +L  F   G++    VALL +H+VG   C
Sbjct:   23 LKFKFYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAGPNFSVRGFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMNVFDSVALLGAHTVGIASC 196          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 132.88 bits (333), Expect = 1.473e-30
Identity = 70/176 (39.77%), Postives = 95/176 (53.98%), Query Frame = 3
Query:  135 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHCV 659
            L  NFY  +CP     +K  VK           S LR  FHDC V  CD S+LLD T     E+    +    R F  I +IK AVE+ CPGVVSCADIL ++ RD VV LGGP   +K GRRD + +        +P    S+S ++  F+A+G+    +VAL  +H++G++ CV
Sbjct:    2 LTTNFYSTSCPNLLSTVKSGVKSAVSSQPRMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAGPNRNSARGFTVINDIKSAVEKACPGVVSCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCV 177          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.473e-30
Identity = 69/175 (39.43%), Postives = 96/175 (54.86%), Query Frame = 3
Query:  135 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            L  NFY  TCP+  D +K  V+    + +    S LR  FHDC V  CDAS+LLD T     E+  +     +R    I+NIK  VE  CPGVVSCADI+ ++ RD VV LGGP   +K GRRD + +        +P    S+S ++ +F A G+    +VAL  +H++G+  C
Sbjct:   27 LSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTRDMVALSGAHTIGQARC 201          
The following BLAST results are available for this feature:
BLAST of FC920654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER42_ARATH1.893e-8682.42Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH2.042e-5658.99Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER48_ARATH5.780e-3539.77Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER11_ARATH1.574e-3234.64Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER52_ARATH1.020e-3140.57Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER56_ARATH3.877e-3139.33Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER47_ARATH5.064e-3138.29Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER28_ARATH6.613e-3141.95Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PERP7_BRARA1.473e-3039.77Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER4_VITVI1.473e-3039.43Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]

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Properties
Property NameValue
Genbank descriptionC32011C11EF RVDevelop1 Citrus clementina cDNA clone C32011C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920654 ID=FC920654; Name=FC920654; organism=Citrus clementina; type=EST; length=665bp
GGTTGGTCACCTTTCGTGAGTGAAGAGTAGAAGAGACAATGGGTACGAAA
GCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTGTCTCTGAG
GTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTCTTGTTATGAATTTTT
ACAAGGATACATGCCCTCAGGCCGAGGACATTATCAAGGAACAAGTTAAG
CTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCTTAGAAACAT
TTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCTGGACT
CGACAAGAAAGACCTTGTCTGAGAAGGAAATGGACAGGAGCTTTGGTATG
AGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAAAGAGAGTG
CCCTGGTGTTGTTTCCTGTGCTGATATTCTTGTCCTGTCCGGTAGAGATG
GCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGA
GATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCA
CAAAGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTG
ACGCCCCTGGACTTGTTGCTCTGCTACGATCTCACAGTGTTGGCAGAACT
CATTGTGTGAAGCTG
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