FC920709

Overview
NameFC920709
Unique NameFC920709
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length643
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14180 contig Ccv1_Contig14180:1..643. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_ARATH (Protein-L-isoaspartate O-methyltransferase OS=Arabidopsis thaliana GN=PCM PE=2 SV=3)

HSP 1 Score: 236.113 bits (601), Expect = 1.172e-61
Identity = 108/153 (70.59%), Postives = 134/153 (87.58%), Query Frame = 2
Query:  185 MERYWSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKSW 643
            M+++WS S +NKNKAMVE+LQ++G++TS +V++ ME +DR  FV D +  YVDSPM+IGYN TISAPHMHA CLQLLE++LKPGM  LD+GSGTGYLTACFA+MVG +GRA+GVEHIPELVASS++NIE SAA+P LKEGSL+VHVGDGR+ W
Sbjct:    1 MKQFWSPSSINKNKAMVENLQNHGIVTSDEVAKAMEAVDRGVFVTDRSSAYVDSPMSIGYNVTISAPHMHAMCLQLLEKHLKPGMRVLDVGSGTGYLTACFAVMVGTEGRAIGVEHIPELVASSVKNIEASAASPFLKEGSLAVHVGDGRQGW 153          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_WHEAT (Protein-L-isoaspartate O-methyltransferase OS=Triticum aestivum GN=PCM PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.692e-60
Identity = 105/153 (68.63%), Postives = 131/153 (85.62%), Query Frame = 2
Query:  185 MERYWSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKSW 643
            M ++W+   + KN A+VE+L+ YGV+ + KV+EVMETIDRA FVP+G  PY DSPM IGYNATISAPHMHATCL+LL++ L+PGMHALD+GSG+GYLTACFA+MVGP+GRAVG+EHIPELV +S +N+E+SAAA L+K+GSLS HV DGR  W
Sbjct:    1 MAQFWAEGSLEKNNALVEYLKQYGVVRTDKVAEVMETIDRALFVPEGFTPYTDSPMPIGYNATISAPHMHATCLELLKDYLQPGMHALDVGSGSGYLTACFAMMVGPEGRAVGIEHIPELVVASTENVERSAAAALMKDGSLSFHVSDGRLGW 153          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_CHICK (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Gallus gallus GN=PCMT1 PE=2 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 1.651e-31
Identity = 71/149 (47.65%), Postives = 97/149 (65.10%), Query Frame = 2
Query:  197 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKSW 643
            W   G + ++ ++ +L+  G+I S KV EVM   DR  +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACF+ MVGP+G+ VG++HI ELV  SI N++K     LL  G + + VGDGR  +
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKSDKVFEVMLATDRCHYAKYN--PYMDSPQSIGFQATISAPHMHAYALELLSDQLHEGAKALDVGSGSGILTACFSRMVGPKGQVVGIDHIKELVDDSINNVKKDDPT-LLSSGRVKLIVGDGRMGY 147          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_BOVIN (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Bos taurus GN=PCMT1 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 4.802e-31
Identity = 70/149 (46.98%), Postives = 96/149 (64.43%), Query Frame = 2
Query:  197 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKSW 643
            W   G + ++ ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVGP G+ +G++HI ELV  SI N+ K     LL  G + + VGDGR  +
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLNEGAKALDVGSGSGILTACFARMVGPSGKVIGIDHIKELVDDSINNVRKDDPM-LLSSGRVQLVVGDGRMGY 147          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_PIG (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Sus scrofa GN=PCMT1 PE=1 SV=3)

HSP 1 Score: 134.035 bits (336), Expect = 6.272e-31
Identity = 70/149 (46.98%), Postives = 96/149 (64.43%), Query Frame = 2
Query:  197 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKSW 643
            W   G + ++ ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVGP G+ +G++HI ELV  SI N+ K     LL  G + + VGDGR  +
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGPSGKVIGIDHIKELVDDSINNVRKDDPM-LLSSGRVQLVVGDGRMGY 147          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_DANRE (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Danio rerio GN=pcmt PE=2 SV=3)

HSP 1 Score: 132.494 bits (332), Expect = 1.825e-30
Identity = 69/146 (47.26%), Postives = 96/146 (65.75%), Query Frame = 2
Query:  197 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGR 634
            W   G + +  +V +L+  G+I S +V EVM   DR+ F      PY+DSP +IGY ATISAPHMHA  L+LL ++L  G  ALD+GSG+G L+ CF+ MVGP G+ +G++HI ELV  SI N++K   + L+  G + + VGDGR
Sbjct:    3 WKSGGAS-HAELVNNLRKNGIIKSDRVYEVMLATDRSHF--SRCNPYMDSPQSIGYQATISAPHMHAYALELLHDHLYEGAKALDVGSGSGILSVCFSRMVGPTGKVIGIDHIKELVEDSIANVKKDDPS-LITSGRIKLIVGDGR 144          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_CAEEL (Protein-L-isoaspartate O-methyltransferase OS=Caenorhabditis elegans GN=pcm-1 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.113e-30
Identity = 66/149 (44.30%), Postives = 97/149 (65.10%), Query Frame = 2
Query:  197 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKSW 643
            W  SG + N  ++++L++  V  S++  + M+++DR  F P    PY D+P  IGYNAT+SAPHMHA  L  L+ +L  G  ALD+GSG+GYLT C A+MVG  G  VG+EH+P+LV  S +NI K  +   L+ G++ +  GDGR+ +
Sbjct:    3 WRSSG-STNSELIDNLRNNRVFASQRAYDAMKSVDRGDFAPRA--PYEDAPQRIGYNATVSAPHMHAAALDYLQNHLVAGAKALDVGSGSGYLTVCMAMMVGRNGTVVGIEHMPQLVELSEKNIRKHHSEQ-LERGNVIIIEGDGRQGF 147          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_MOUSE (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Mus musculus GN=Pcmt1 PE=1 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 4.065e-30
Identity = 69/149 (46.31%), Postives = 96/149 (64.43%), Query Frame = 2
Query:  197 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKSW 643
            W   G + ++ ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVG  G+ +G++HI ELV  SI N++K     LL  G + + VGDGR  +
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKTDKVFEVMLATDRSHYAKSN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGNSGKVIGIDHIKELVDDSITNVKKDDPM-LLSSGRVRLVVGDGRMGY 147          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_RAT (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus GN=Pcmt1 PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 5.310e-30
Identity = 69/146 (47.26%), Postives = 95/146 (65.07%), Query Frame = 2
Query:  197 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGR 634
            W   G + ++ ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVG  G+ +G++HI ELV  SI N++K     LL  G + + VGDGR
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKTDKVFEVMLATDRSHYAKSN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGHSGKVIGIDHIKELVDDSITNVKKDDPM-LLSSGRVRLVVGDGR 144          
BLAST of FC920709 vs. ExPASy Swiss-Prot
Match: PIMT_SCHPO (Probable protein-L-isoaspartate O-methyltransferase OS=Schizosaccharomyces pombe GN=pcm2 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.935e-30
Identity = 70/152 (46.05%), Postives = 95/152 (62.50%), Query Frame = 2
Query:  194 YWSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEK-----SAAAPLLKEGSLSVHVGDGR 634
            +WS + ++ N A+V+HL     +T+++  + M    R+ + P    PY+DSP +IGY  TISAPHMHAT LQ LE  L+PG  ALDIGSG+GYL A  A MV P G   G+EHIP+LV +S +N+ K          + KE  L ++VGDGR
Sbjct:    2 FWSFN-LSSNAALVQHLVESKFLTNQRAIKAMNATSRSFYCP--LSPYMDSPQSIGYGVTISAPHMHATALQELEPVLQPGCSALDIGSGSGYLVAAMARMVAPNGTVKGIEHIPQLVETSKKNLLKDINHDEVLMEMYKEKRLQINVGDGR 150          
The following BLAST results are available for this feature:
BLAST of FC920709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
PIMT_ARATH1.172e-6170.59Protein-L-isoaspartate O-methyltransferase OS=Arab... [more]
PIMT_WHEAT1.692e-6068.63Protein-L-isoaspartate O-methyltransferase OS=Trit... [more]
PIMT_CHICK1.651e-3147.65Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_BOVIN4.802e-3146.98Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_PIG6.272e-3146.98Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_DANRE1.825e-3047.26Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_CAEEL3.113e-3044.30Protein-L-isoaspartate O-methyltransferase OS=Caen... [more]
PIMT_MOUSE4.065e-3046.31Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_RAT5.310e-3047.26Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_SCHPO6.935e-3046.05Probable protein-L-isoaspartate O-methyltransferas... [more]

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Properties
Property NameValue
Genbank descriptionC32012A10EF RVDevelop1 Citrus clementina cDNA clone C32012A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920709 ID=FC920709; Name=FC920709; organism=Citrus clementina; type=EST; length=643bp
TGGTTTAAAGCACACATTATCAACCTTCACTCTTATCCCTCACCGTCATC
GCTGTTCTTACTTACCATCACCATCACCATCACCGTCACTTGTCTCTTTG
TCTTCTTCTTTTCATCTTCCAAATCCAGATAACCTCAGTCGTTTCCTCAC
GGGTAACCTCACGGGTAACTGTCCCTTTTTCAAGATGGAGAGATACTGGA
GTGGAAGTGGTGTCAACAAGAATAAAGCGATGGTGGAGCATTTGCAGCAT
TATGGAGTGATTACATCAAAAAAGGTATCTGAAGTAATGGAAACTATTGA
TCGGGCTTGCTTTGTGCCAGATGGTACTCCACCTTATGTTGACAGCCCAA
TGGCAATAGGTTACAATGCCACTATTTCAGCACCTCATATGCATGCAACA
TGCCTTCAATTATTGGAGGAGAATCTGAAACCTGGCATGCACGCTTTGGA
TATTGGTTCTGGAACTGGATATTTGACAGCGTGCTTTGCCTTGATGGTTG
GACCACAAGGTCGTGCTGTGGGTGTCGAGCACATTCCTGAGTTGGTGGCT
TCATCAATCCAGAATATTGAAAAAAGTGCAGCGGCTCCATTGCTGAAAGA
AGGTTCTCTCTCAGTGCATGTTGGTGATGGAAGAAAAAGCTGG
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