FC920774

Overview
NameFC920774
Unique NameFC920774
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig886 contig Ccv1_Contig886:15..726. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920774 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 9.818e-23
Identity = 71/197 (36.04%), Postives = 104/197 (52.79%), Query Frame = 2
Query:   86 PLLGISSNS-EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLGT--NGQ--CPLDVIQLSSPSERGDNLRLLPYDNYK--IVKVSTDVNLRFPVKVSVKPCN--EEPLWKVDSYDDP----LIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNRIGVSTKDGVRRLLLVGDHEPAFD 637
            PLL  + ++  PVLDI G K+++   Y ++PVL   GG  T   T  NG   CP  V+Q     +    L   P +N K  +V+VSTD+N+ F    +  PC      +W++D YD+      +  GG +G+PG ET+ +WFKIE+   F   G Y +V CP+VC SC  +C  +G+      RR L + D   AF+
Sbjct:   24 PLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFP-ENPKEDVVRVSTDLNINFS---AFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE---FCGSGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSDKPFAFE 213          
BLAST of FC920774 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22
Identity = 65/182 (35.71%), Postives = 100/182 (54.95%), Query Frame = 2
Query:  110 SEPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG--TNGQCPLDVIQLSSPSERGDNLRLLPYDNYK-IVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL----IVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNRIGVSTKDGVRRLLLVGDHEPAF 634
            + PVLD  G+++++ ++Y ++  + GAGG    LG  T   CP  V+Q  S  + G  +     D+   +V+VSTDVN+ F V +  + C+   +W++D+YD+      + T G +G PG  TL +WFKIEKAG       Y    CPSVC SC   C+ IG  + D  +  L + D+E A+
Sbjct:   28 NSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEF-VPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG----YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLALSDNEWAW 204          
BLAST of FC920774 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14
Identity = 58/179 (32.40%), Postives = 91/179 (50.84%), Query Frame = 2
Query:  113 EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHL---GTNGQCPLDVIQLSSPSERGDNLRLLPYDNYK--IVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL---IVTGGSEGHPGAETLLNWFKIEKAG-NFSYGGVYNIVHCPSVCLSCPRRCNRIGV-STKDGVRRLLLVGD 619
            +P++DI G  V   ++Y ++  + GAGG    +   G   +CPL V+Q   P + G+ +      N K  IV  S D+N++F + ++   CNE   WKVD +   +   +  GG +G+ G E+  + FKI+KAG  FS    Y    CPS   +    CN + +   K  +RRL+L  D
Sbjct:    4 KPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQ--DPFDNGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN---CNETTAWKVDRFPGVIGWTVTLGGEKGYHGFESTHSMFKIKKAGLPFS----YKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTND 173          
BLAST of FC920774 vs. ExPASy Swiss-Prot
Match: SPI2_SOLTU (Serine protease inhibitor 2 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13
Identity = 58/194 (29.90%), Postives = 99/194 (51.03%), Query Frame = 2
Query:   98 ISSNSEPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNY--KIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL----IVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNRIGVSTKDGVRRLLLVGDHEPAFDVLF 646
            + S++ PVLD+ G ++ S L Y++I    GA G   +LG    ++  C   + + +S     G  +R +   ++  + +  +  +N++F +  S K C    +WKV  YD  L    + TGG+ G   +    +WFKI K+    Y    N+++CP    S  + C+++GV  ++G RRL LV  +E   DVLF
Sbjct:    1 LPSDATPVLDVTGKELDSRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTS-KLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQLGY----NLLYCPVTSSSDDQFCSKVGVVHQNGKRRLALV--NENPLDVLF 183          
BLAST of FC920774 vs. ExPASy Swiss-Prot
Match: SPI7_SOLTU (Serine protease inhibitor 7 OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.400e-13
Identity = 57/194 (29.38%), Postives = 100/194 (51.55%), Query Frame = 2
Query:   92 LGISSNSEPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNY--KIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYD----DPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCP-SVCLSCP-----RRCNRIGVSTKDGVRRLLLVGDH 622
            + + S++ PVLD+ G ++ S L Y++I    GA G   +LG    ++  C   + + +S     G  +R +   ++  + +  +  +N++F +  S K C    +WKV  YD      L+ TGG+ G   +    +WFKI K+  F     YN+++CP +  +SCP     + C ++GV  ++G RRL LV D+
Sbjct:   27 INLPSDATPVLDVAGKELDSRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTS-KLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQFG----YNLLYCPVTSTMSCPFSSDDQFCLKVGVVHQNGKRRLALVKDN 211          
BLAST of FC920774 vs. ExPASy Swiss-Prot
Match: DRTI_DELRE (Kunitz-type serine protease inhibitor DrTI OS=Delonix regia PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.203e-12
Identity = 60/192 (31.25%), Postives = 89/192 (46.35%), Query Frame = 2
Query:  104 SNSEPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG-TNGQ-CPLDVIQLSSPSERGDNLRLL-PYDNYKIVKVSTDVNLRFPVKVSVKPCNEEPLWK-VDSYDDPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNRIGVSTKDGVRRLLLVGDHEPAFDVLFFPSEESS 667
            S++E V DI G  V    EY ++  + GAGG     G T G  CP+ +IQ  S  + G  +R   P ++   +   T++ + F   V    C E   W  V    +  +  GGSE HP  E +  +FKIEK G+ +    Y +V CP    S    C+ IG++  +G R L+L    +  F V+F      S
Sbjct:    1 SDAEKVYDIEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFSSPEESQGKIYTDTELEIEF---VEKPDCAESSKWVIVKDSGEARVAIGGSEDHPQGELVRGFFKIEKLGSLA----YKLVFCPK---SSSGSCSDIGIN-YEGRRSLVLKSSDDSPFRVVFVKPRSGS 181          
BLAST of FC920774 vs. ExPASy Swiss-Prot
Match: SPI1_SOLTU (Serine protease inhibitor 1 OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.052e-12
Identity = 57/194 (29.38%), Postives = 99/194 (51.03%), Query Frame = 2
Query:   92 LGISSNSEPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNY--KIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYD----DPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCP-SVCLSCP-----RRCNRIGVSTKDGVRRLLLVGDH 622
            + + S++ PVLD+ G ++ S L Y++I    GA G   +LG    ++  C   V + +S     G  +R +   ++  + +  +  +N++F +  S K C    +WKV  YD      L+ TGG+ G   +    +WFKI K+        YN+++CP +  +SCP     + C ++GV  ++G RRL LV D+
Sbjct:   27 INLPSDATPVLDVTGKELDSRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGVFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTS-KLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQLG----YNLLYCPVTSTMSCPFSSDDQFCLKVGVVHQNGKRRLALVKDN 211          
BLAST of FC920774 vs. ExPASy Swiss-Prot
Match: API9_SOLTU (Aspartic protease inhibitor 9 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.018e-11
Identity = 59/192 (30.73%), Postives = 91/192 (47.40%), Query Frame = 2
Query:  113 EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNYKIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDS----YDDPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCP---SVCLSCP--RRCNRIGVSTKDGVRRLLLVGDHEPAFDVLF 646
            +PVLD  G ++     Y++I +  GA G   +LG    ++  CP  V + +S     G  +R +P           ++    P   +VK C    +WKV +    +   L+ TGG+ G        ++FKI K  NF     YN++ CP    +CL CP  + C ++GV  ++G RRL LV  +E   DVLF
Sbjct:    6 KPVLDTNGKELNPNSSYRIISIGAGALGGDVYLGKSPNSDAPCPDGVFRYNSDVGPSGTPVRFIPLSGGIFEDQLLNIQFNIP---TVKLCVSYTIWKVGNLNAYFRTMLLETGGTIGQADN----SYFKIVKLSNFG----YNLLSCPFTSIICLRCPEDQFCAKVGVVIQNGKRRLALV--NENPLDVLF 184          
BLAST of FC920774 vs. ExPASy Swiss-Prot
Match: SPI6_SOLTU (Probable serine protease inhibitor 6 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.330e-11
Identity = 55/194 (28.35%), Postives = 98/194 (50.52%), Query Frame = 2
Query:   92 LGISSNSEPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNY--KIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYD----DPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCP-SVCLSCP-----RRCNRIGVSTKDGVRRLLLVGDH 622
            + + S++ PVLD+ G ++   L Y +I    GA G   +LG    ++  C   + + +S     G  +R +   ++  + +  +  +N++F +  S K C    +WKV  YD      L+ TGG+ G   +    +WFKI ++  F     YN+++CP +  +SCP     + C ++GV  ++G RRL LV D+
Sbjct:   27 INLPSDATPVLDVTGKELDPRLSYHIISTFWGALGGDVYLGKSPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTS-KLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVQSSQFG----YNLLYCPVTSTMSCPFSSDDQFCLKVGVVHQNGKRRLALVKDN 211          
BLAST of FC920774 vs. ExPASy Swiss-Prot
Match: API2_SOLTU (Aspartic protease inhibitor 2 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.330e-11
Identity = 62/202 (30.69%), Postives = 99/202 (49.01%), Query Frame = 2
Query:   83 QPLLGISSNS---EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNYKIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDS----YDDPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSC--PRRCNRIGVSTKDGVRRLLLVGDHEPAFDVLF 646
            Q L+ + S S   +PVLD  G ++     Y++I +  GA G   +LG    ++G CP  V + +S     G  +R +P      +     +N++F +  +VK C    +WKV +    +   L+ TGG+ G   +    ++FKI K  NF Y  +Y  +  P +C  C     C ++GV  ++G RRL LV  +E   DVLF
Sbjct:   25 QNLIDLPSESPLPKPVLDTNGKELNPNSSYRIISIGRGALGGDVYLGKSPNSDGPCPDGVFRYNSDVGPSGTFVRFIPLSGG--IFEDQLLNIQFNI-ATVKLCVSYTIWKVGNLNAYFRTMLLETGGTIGQADS----SYFKIVKLSNFGYNLLYCPITPPFLCPFCRDDNFCAKVGVVIQNGKRRLALV--NENPLDVLF 217          
The following BLAST results are available for this feature:
BLAST of FC920774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
MIRA_RICDU9.818e-2336.04Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
ASP_THECC3.731e-2235.7121 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
LSPI_CARPA8.331e-1432.40Latex serine proteinase inhibitor OS=Carica papaya... [more]
SPI2_SOLTU1.856e-1329.90Serine protease inhibitor 2 OS=Solanum tuberosum P... [more]
SPI7_SOLTU5.400e-1329.38Serine protease inhibitor 7 OS=Solanum tuberosum P... [more]
DRTI_DELRE1.203e-1231.25Kunitz-type serine protease inhibitor DrTI OS=Delo... [more]
SPI1_SOLTU2.052e-1229.38Serine protease inhibitor 1 OS=Solanum tuberosum P... [more]
API9_SOLTU1.018e-1130.73Aspartic protease inhibitor 9 OS=Solanum tuberosum... [more]
SPI6_SOLTU1.330e-1128.35Probable serine protease inhibitor 6 OS=Solanum tu... [more]
API2_SOLTU1.330e-1130.69Aspartic protease inhibitor 2 OS=Solanum tuberosum... [more]

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Properties
Property NameValue
Genbank descriptionC32012H04EF RVDevelop1 Citrus clementina cDNA clone C32012H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920774 ID=FC920774; Name=FC920774; organism=Citrus clementina; type=EST; length=712bp
CAGCAGCCAGCCTTTCAGTGGCAAAAAAATGAAGACTTCATTGATAACAA
CACTCTCCTTCCTTATCCTTACCTTGCCCACGCAGCCTCTATTGGGCATC
TCATCAAACTCTGAACCTGTCTTAGATATCATTGGCAACAAGGTCAAATC
CACCCTCGAGTATAAACTTATCCCAGTCCTAGATGGCGCCGGTGGATTCA
GCACACACCTAGGCACAAATGGACAGTGTCCCTTGGACGTTATCCAATTA
AGTTCTCCTAGCGAAAGGGGAGATAATTTAAGATTACTTCCGTACGACAA
TTACAAAATTGTCAAGGTATCCACTGATGTCAACCTGAGATTCCCCGTAA
AAGTTTCTGTTAAGCCCTGTAATGAAGAACCATTGTGGAAAGTTGATAGC
TATGACGATCCATTAATTGTAACCGGCGGAAGTGAGGGCCACCCAGGAGC
TGAAACGTTGCTAAATTGGTTTAAGATTGAGAAAGCTGGAAATTTTTCAT
ATGGTGGTGTATACAATATTGTCCATTGTCCGAGTGTCTGTCTATCTTGT
CCTAGACGCTGCAACAGAATTGGCGTTTCAACTAAGGATGGCGTTCGACG
TCTGCTTCTAGTTGGTGATCATGAACCCGCCTTTGATGTTCTGTTTTTTC
CATCAGAAGAAAGCTCAAGGCTACTTCAAGCCTGCTACGCAATATCAAGG
TTTTTTGAAGCT
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