FC920776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920776 vs. ExPASy Swiss-Prot
Match: BI1L_ARATH (BI1-like protein OS=Arabidopsis thaliana GN=At4g15470 PE=2 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 8.401e-76 Identity = 152/242 (62.81%), Postives = 172/242 (71.07%), Query Frame = 3 Query: 39 KMLGYETVR----SKDDGKFEVDLEGGDGER-LYPGLSYGENQLRWGFIRKVYGILTAQIVLTTLVSSITVLYNPINDXXXXXXXXXXXXXXXXXXXXXXXHVYHQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGISALVFCGYIVYDTDKLDQRFTYDDYILASVTLYLDILNL 749 K GY +V + GK ++DLE G GE LYPGLSYGENQLRWGFIRKVYGIL+AQ++LTTL+S++ VL P+ND H+YHQKHPVNLI+L LFTVSLS V VSCA T+GRIVL+ALILT +VV SLT YTFWA+KKGKDFSFLGP +QMFFPLG TS AVYGG SALVFCGYIVYDTD L +RFTYD+YILASV LYLDILNL Sbjct: 3 KPYGYASVSMSGIDRSAGK-DIDLEMGVGEATLYPGLSYGENQLRWGFIRKVYGILSAQLLLTTLISAVVVLNPPVNDLLTGSPGILLFLCIVPFILIWPLHIYHQKHPVNLILLALFTVSLSFTVGVSCAMTEGRIVLQALILTLSVVGSLTAYTFWAAKKGKDFSFLGPILFTSLIILVVTSFIQMFFPLGPTSVAVYGGFSALVFCGYIVYDTDNLIKRFTYDEYILASVALYLDILNL 243
BLAST of FC920776 vs. ExPASy Swiss-Prot
Match: TMBI4_MOUSE (Transmembrane BAX inhibitor motif-containing protein 4 OS=Mus musculus GN=Tmbim4 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.273e-23 Identity = 63/199 (31.66%), Postives = 103/199 (51.76%), Query Frame = 3 Query: 153 LRWGFIRKVYGILTAQIVLTTLVSSITVLYNPINDXXXXXXXXXXXXXXXXXXXXXXXHVYHQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGISALVFCGYIVYDTDKLDQRFTYDDYILASVTLYLDILNL 749 +R F+RKVY IL+ Q++LTT+ S++ + + + ++ HP+NL +L FT+S SL VA D +VL+A I+T+AV LT YT + + DF+ G +++FF T V + AL+FCG+I+YDT L R + ++Y++A+++LY+DI+NL Sbjct: 30 IRMAFLRKVYSILSLQVLLTTVTSALFLYFQALRTFVHESPALIVVFALGSLGLIFALTLHRHTHPLNLYLLFAFTLSESLAVAAVVTFYDVYLVLQAFIMTTAVFLGLTAYTLQSKR---DFTKFGAGLFAGLWILCLAGFLKLFF-YSETMELVLASLGALLFCGFIIYDTHSLMHRLSPEEYVIAAISLYMDIINL 224
BLAST of FC920776 vs. ExPASy Swiss-Prot
Match: TMBI4_HUMAN (Transmembrane BAX inhibitor motif-containing protein 4 OS=Homo sapiens GN=TMBIM4 PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 2.032e-21 Identity = 64/199 (32.16%), Postives = 99/199 (49.75%), Query Frame = 3 Query: 153 LRWGFIRKVYGILTAQIVLTTLVSSITVLYNPINDXXXXXXXXXXXXXXXXXXXXXXXHVYHQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGISALVFCGYIVYDTDKLDQRFTYDDYILASVTLYLDILNL 749 +R F+RKVY IL+ Q++LTT+ S++ + + + + K+P+NL +L FT+ +L VAV D I+L+A ILT+ V LT YT + K DFS G ++ FF V AL+FCG+I+YDT L + + ++Y+LA+++LYLDI+NL Sbjct: 30 IRMAFLRKVYSILSLQVLLTTVTSTVFLYFESVRTFVHESPALILLFALGSLGLIFALTLNRHKYPLNLYLLFGFTLLEALTVAVVVTFYDVYIILQAFILTTTVFFGLTVYTLQSKK---DFSKFGAGLFALLWILCLSGFLKFFF-YSEIMELVLAAAGALLFCGFIIYDTHSLMHKLSPEEYVLAAISLYLDIINL 224
BLAST of FC920776 vs. ExPASy Swiss-Prot
Match: YQE4_SCHPO (Uncharacterized membrane protein C576.04 OS=Schizosaccharomyces pombe GN=SPCC576.04 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.119e-18 Identity = 60/199 (30.15%), Postives = 91/199 (45.73%), Query Frame = 3 Query: 153 LRWGFIRKVYGILTAQIVLTTLVSSITVLYNPINDXXXXXXXXXXXXXXXXXXXXXXXHVYHQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGISALVFCGYIVYDTDKLDQRFTYDDYILASVTLYLDILNL 749 +R F+RKVY ILTAQ+ +T+L I L+ + + +P N I L LFT L + + RI+LEA+ +T V +LT +TF + DFS LG + F P + G LVFCGYI++DT + R++ +++I++S+ LYLD +NL Sbjct: 54 IRMAFLRKVYAILTAQLFVTSLFGGIFYLHPAFSFWVQMHPWFLILNFFISLVVLFGLIMKPYSYPRNYIFLFLFTALEGLTLGTAITFFSARIILEAVFITLGVFVALTAFTFQSKW---DFSRLGGFLYVSLWSLILTPLIFFFVPSTPFIDMAFAGFGTLVFCGYILFDTYNILHRYSPEEFIMSSLMLYLDFINL 249
BLAST of FC920776 vs. ExPASy Swiss-Prot
Match: TMBI4_CAEEL (Transmembrane BAX inhibitor motif-containing protein 4 OS=Caenorhabditis elegans GN=tmbi-4 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 8.270e-15 Identity = 60/215 (27.91%), Postives = 93/215 (43.26%), Query Frame = 3 Query: 108 DGERLYPG-LSYGENQLRWGFIRKVYGILTAQIVLTTLVSSITVLYNPINDXXXXXXXXXXXXXXXXXXXXXXXHVYHQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGISALVFCGYIVYDTDKLDQRFTYDDYILASVTLYLDILNL 749 D + + PG + +R F+RKV GI+ Q++ T + + N HVY ++ P+N ++L FT ++ + + ++VLEA ++T VV SL YT + +DFS QMFF + V A +FC +V D D + RF+ +DYI A V+LY+DILNL Sbjct: 53 DADGILPGCVGKANRMIRIAFLRKVLGIVGFQLLFTIGICAAIYNIPNSNQLLQKHAWIVFPNLLGSIALIIALHVYAREVPLNYVLLAAFTAVQAVTMGCVVTLFEAKVVLEAAVITGLVVASLFAYTL---QNKRDFSVGYASMGSLLCVLLWAGIFQMFF-MSPAVNFVINVFGAGLFCVLLVIDLDMIMYRFSPEDYICACVSLYMDILNL 263 The following BLAST results are available for this feature:
BLAST of FC920776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920776 ID=FC920776; Name=FC920776; organism=Citrus clementina; type=EST; length=751bpback to top |