FC920781

Overview
NameFC920781
Unique NameFC920781
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length778
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC920781_ssr32 microsatellite FC920781_ssr32:32..47. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig14439 contig Ccv1_Contig14439:1..773. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920781 vs. ExPASy Swiss-Prot
Match: SAP2_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana GN=SAP2 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 1.405e-42
Identity = 69/125 (55.20%), Postives = 89/125 (71.20%), Query Frame = 3
Query:  219 MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESV---EAKPKEGPSRCSSCKKRVGL 584
            MDHD+TGCQ+PPEGP LC NNCGFFGS ATMNMCSKC+KD++ +Q+Q    AS++      +SS+   E+  AA VD++  SVEP  +SVQPS    ++E V   EA   +GPSRC++C KRVGL
Sbjct:    1 MDHDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSG--TSSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCNKRVGL 123          

HSP 2 Score: 52.373 bits (124), Expect = 1.405e-42
Identity = 21/38 (55.26%), Postives = 29/38 (76.32%), Query Frame = 2
Query:  584 TGFKCRXWYLYCVSHRYSEQHNCPFDYRTAARDAIIKA 697
            TGFKCR   L+C +HRY++ H+C F+Y  AA++AI KA
Sbjct:  124 TGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKA 161          
BLAST of FC920781 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.529e-35
Identity = 85/173 (49.13%), Postives = 104/173 (60.12%), Query Frame = 3
Query:  219 MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPK--EGPSRCSSCKKRVGLQDSNVAXGT-YTVCHIAIRNNIXXXXXXXXXXXXXXXKQPCDQAEKLDK 728
            M+H ETGCQ P EGPILCINNCGFFGS ATMNMCSKC+K++++KQ+QAKLAASSI SIVN     +G E + A   +V  + VE K +  QP+  +  SE V   PK  EGP+RCS+C+KRVGL   N   G  Y   H     +                  P  +AEKLDK
Sbjct:    1 MEHKETGCQQP-EGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVN--GGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDK 170          
BLAST of FC920781 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.529e-35
Identity = 85/173 (49.13%), Postives = 104/173 (60.12%), Query Frame = 3
Query:  219 MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPK--EGPSRCSSCKKRVGLQDSNVAXGT-YTVCHIAIRNNIXXXXXXXXXXXXXXXKQPCDQAEKLDK 728
            M+H ETGCQ P EGPILCINNCGFFGS ATMNMCSKC+K++++KQ+QAKLAASSI SIVN     +G E + A   +V  + VE K +  QP+  +  SE V   PK  EGP+RCS+C+KRVGL   N   G  Y   H     +                  P  +AEKLDK
Sbjct:    1 MEHKETGCQQP-EGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVN--GGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDK 170          
BLAST of FC920781 vs. ExPASy Swiss-Prot
Match: SAP4_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica GN=SAP4 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.391e-34
Identity = 81/173 (46.82%), Postives = 101/173 (58.38%), Query Frame = 3
Query:  219 MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKP--KEGPSRCSSCKKRVGLQDSNVAXGT-YTVCHIAIRNNIXXXXXXXXXXXXXXXKQPCDQAEKLDK 728
            M+H E GCQ P EGPILCINNCGFFGS ATMNMCSKC+K++++K++QAKLAASSI SIVN           A+ +  V  + VE K + VQP+  +  SE V   P  KEGP+RC++C+KRVGL   N   G  Y   H     +                  P  +AEKLDK
Sbjct:    1 MEHKEAGCQQP-EGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIVAASGSTAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDK 172          
BLAST of FC920781 vs. ExPASy Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 9.214e-24
Identity = 54/136 (39.71%), Postives = 76/136 (55.88%), Query Frame = 3
Query:  228 DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSE--------SVEAKPKEGPSRCSSCKKRVGLQDSNVAXGT 611
            +E  CQ P E   LC+NNCGF GS ATMN+CS CY D+ LKQ Q    +SSI S V E+S S    S +++ +   +S + P ++   PS   E+ E        + E   ++ P+RC++C+KRVGL       GT
Sbjct:    3 EEHRCQTP-ESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQ---QSSSIKSTV-ESSLSVSPPSSSSSEI---SSPIIPPLLK-NPSVKLEVPEKKAVISLPTTEQNQQQRPNRCTTCRKRVGLTGFKCRCGT 129          

HSP 2 Score: 48.521 bits (114), Expect = 9.214e-24
Identity = 19/38 (50.00%), Postives = 26/38 (68.42%), Query Frame = 2
Query:  584 TGFKCRXWYLYCVSHRYSEQHNCPFDYRTAARDAIIKA 697
            TGFKCR   ++C  HRY E H C +D+++A R+ I KA
Sbjct:  121 TGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKA 158          
BLAST of FC920781 vs. ExPASy Swiss-Prot
Match: SAP9_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.286e-22
Identity = 44/111 (39.64%), Postives = 60/111 (54.05%), Query Frame = 3
Query:  252 PEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGL 584
            PE PILC+NNCGFFGS  T NMCSKCY+D +       +AA  +       +SS+ +    A   +V A++VE K  + +P             PK   +RC SC+K+VGL
Sbjct:   17 PEAPILCVNNCGFFGSSMTNNMCSKCYRDFV---KVTTMAAPVVEKKAFTPASSSKTPLEPAKPDEVPAAAVEDKQAAQEP-------------PKPPSNRCLSCRKKVGL 111          

HSP 2 Score: 50.8322 bits (120), Expect = 1.286e-22
Identity = 20/37 (54.05%), Postives = 26/37 (70.27%), Query Frame = 2
Query:  584 TGFKCRXWYLYCVSHRYSEQHNCPFDYRTAARDAIIK 694
            TGF+CR    +C +HRY+E H+C FDY+ A RD I K
Sbjct:  112 TGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAK 148          
BLAST of FC920781 vs. ExPASy Swiss-Prot
Match: SAP3_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabidopsis thaliana GN=SAP3 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.467e-20
Identity = 42/122 (34.43%), Postives = 62/122 (50.82%), Query Frame = 3
Query:  261 PILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAK--------------PKEGPSRCSSCKKRVGL 584
            P LC NNCGFFGS AT N+CSKC++D+  ++  +  A  ++            ++S+AA  V   ASS     +S  P   ++  E VEAK              P + P RC +C++RVG+
Sbjct:   10 PRLCANNCGFFGSTATQNLCSKCFRDLQHQEQNSSTAKHAL------------TQSLAA--VGAAASS----SVSPPPPPPADSKEIVEAKSEKRAAAEPEEADGPPQDPKRCLTCRRRVGI 113          

HSP 2 Score: 52.7582 bits (125), Expect = 1.467e-20
Identity = 19/38 (50.00%), Postives = 28/38 (73.68%), Query Frame = 2
Query:  584 TGFKCRXWYLYCVSHRYSEQHNCPFDYRTAARDAIIKA 697
            TGF+CR  +++C +HRY+EQH C FD++   +D I KA
Sbjct:  114 TGFRCRCGFVFCGTHRYAEQHECSFDFKRMGKDKIAKA 151          
BLAST of FC920781 vs. ExPASy Swiss-Prot
Match: SAP6_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.233e-20
Identity = 44/119 (36.97%), Postives = 59/119 (49.58%), Query Frame = 3
Query:  228 DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGL 584
            +ETG   P E PILC+NNCGFFGS  T NMCSKCY+D         + A ++ ++V +   ++ S +     V    S           S A       E  PK   +RC SC+K+VGL
Sbjct:   11 EETGVHTP-EAPILCVNNCGFFGSRMTENMCSKCYRD--------TVKAKTVATVVEKKPLASLSSTPLVTEVTDGGSG----------SVADGKQVMEEDTPKPPSNRCLSCRKKVGL 110          

HSP 2 Score: 47.3654 bits (111), Expect = 3.233e-20
Identity = 18/37 (48.65%), Postives = 23/37 (62.16%), Query Frame = 2
Query:  584 TGFKCRXWYLYCVSHRYSEQHNCPFDYRTAARDAIIK 694
            TGFKCR    +C  HRY++ H C FDY+   R+ I K
Sbjct:  111 TGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAK 147          
BLAST of FC920781 vs. ExPASy Swiss-Prot
Match: SAP5_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Oryza sativa subsp. japonica GN=SAP5 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.042e-19
Identity = 41/106 (38.68%), Postives = 55/106 (51.89%), Query Frame = 3
Query:  267 LCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGL 584
            LC NNCGFFGS AT+++CSKCY+D   ++  A +  ++  S    T  S+ S S   A               +  S A+E    V A  K   SRC+SC+KRVGL
Sbjct:   14 LCANNCGFFGSPATLDLCSKCYRDRQGRESTAPVVVAAAASACPATHPSSPSSSSCPA--------------FLPSSTAAEAGVVVAAVAK--ASRCASCRKRVGL 103          

HSP 2 Score: 49.2914 bits (116), Expect = 2.042e-19
Identity = 20/38 (52.63%), Postives = 26/38 (68.42%), Query Frame = 2
Query:  584 TGFKCRXWYLYCVSHRYSEQHNCPFDYRTAARDAIIKA 697
            TGF CR    +C +HRY E+H C FD++ A RDAI +A
Sbjct:  104 TGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAIARA 141          
BLAST of FC920781 vs. ExPASy Swiss-Prot
Match: SAP7_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Oryza sativa subsp. japonica GN=SAP7 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.642e-19
Identity = 39/119 (32.77%), Postives = 61/119 (51.26%), Query Frame = 3
Query:  228 DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGL 584
            DET C +   G  +C+  CGFFGS AT NMCS+CY++     D  + AA          ++++  E V  A    + + +   +     S +S  +E   AK    P+RC++C+K+VGL
Sbjct:   11 DETACGSGA-GAAMCVTGCGFFGSEATNNMCSRCYREHSADNDAVEEAA----------AANSDLELVGVAETTTKKARMSAVVPVAVASSSSAAAEQPAAKAATAPNRCAACRKKVGL 118          

HSP 2 Score: 45.0542 bits (105), Expect = 2.642e-19
Identity = 17/37 (45.95%), Postives = 25/37 (67.57%), Query Frame = 2
Query:  584 TGFKCRXWYLYCVSHRYSEQHNCPFDYRTAARDAIIK 694
            TGFKCR    +C  HR+++ H C FDY++A ++ I K
Sbjct:  119 TGFKCRCGGNFCGGHRHADAHGCGFDYKSAGKEQIAK 155          
The following BLAST results are available for this feature:
BLAST of FC920781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
SAP2_ARATH1.405e-4255.20Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSJ1.529e-3549.13Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSI1.529e-3549.13Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ORYSJ8.391e-3446.82Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ARATH9.214e-2439.71Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP9_ORYSJ1.286e-2239.64Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP3_ARATH1.467e-2034.43Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ORYSJ3.233e-2036.97Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP5_ORYSJ2.042e-1938.68Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP7_ORYSJ2.642e-1932.77Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionC32013A02EF RVDevelop1 Citrus clementina cDNA clone C32013A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920781 ID=FC920781; Name=FC920781; organism=Citrus clementina; type=EST; length=778bp
CCCCCGGGGGAAGACTTTTTAAAAAAATCTTGAGAGAGAGAGAGAGACAC
CCGGAAAGGGAAACGAGGACGTCTCTAATCGGTTTTTGCCTGCTCTCTCC
CCGTAGGCCGATCTGGTCCATTTAATTTTAGGGGCTCATTGGATGCTGGC
TTGAGCTCGGGGATCGGCTTAAGGGATTCATTGCTGTTTCTTCTGTTGCT
CGCAGGGGTGGTGAAAACATGGACCATGATGAGACTGGATGCCAAGCTCC
TCCTGAGGGCCCTATCTTGTGCATCAACAATTGTGGTTTCTTTGGAAGTG
TGGCTACTATGAATATGTGTTCCAAATGCTACAAGGATATAATGCTGAAA
CAGGATCAAGCTAAGCTTGCTGCTTCATCTATTGGAAGCATTGTGAATGA
AACGTCAAGCAGCAATGGAAGTGAATCTGTTGCTGCTGCCACTGTTGATG
TGCAAGCTAGTTCAGTGGAGCCAAAAATCATCTCTGTGCAGCCATCATGT
GCTTCAGAATTGAGCGAGAGTGTGGAGGCAAAGCCGAAGGAGGGTCCCAG
CCGGTGTAGCAGTTGCAAGAAGCGTGTTGGTTTACAGGATTCAAATGTCG
CTGNTGGTACTTATACTGTGTGTCACATCGCTATTCGGAACAACATAACT
GCCCCTTTGACTACCGCACTGCTGCTAGGGATGCTATAATTAAAGCAACC
CTGTGATCAGGCTGAGAAGCTAGATAAATCTAGATCAATGGATGAGGTTC
AATATCAAGATGATGACTTGCTCATCTG
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