FC920791

Overview
NameFC920791
Unique NameFC920791
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14197 contig Ccv1_Contig14197:1..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920791 vs. ExPASy Swiss-Prot
Match: XYL1_ARATH (Alpha-xylosidase OS=Arabidopsis thaliana GN=XYL1 PE=1 SV=1)

HSP 1 Score: 429.869 bits (1104), Expect = 7.097e-120
Identity = 198/241 (82.16%), Postives = 222/241 (92.12%), Query Frame = 3
Query:    3 NGVLEYDGHSIYGFSQSIATHKALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGSWYNVFDMTQAISSKDGKFVTLDAPLHVXNVHLHR 725
            NGV EYD HSIYGFS++IATHK LL ++GKRPFILSRSTFVGSG YAAHWTGDN+GTW+ L+ SISTMLNFGIFGVPMVGSDICGFYP PTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQW++VA+SARNALGMRYK+LPFLYTLNYEAH++GAPIARPLFFSFP Y ECY  S QFLLGSS M+SPVLEQGK++V+ALFPPGSWY++FDMTQA+ SK+GK VTL APL+  NVHL++
Sbjct:  511 NGVREYDAHSIYGFSETIATHKGLLNVQGKRPFILSRSTFVGSGQYAAHWTGDNQGTWQSLQVSISTMLNFGIFGVPMVGSDICGFYPQPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWDTVADSARNALGMRYKILPFLYTLNYEAHMTGAPIARPLFFSFPEYTECYGNSRQFLLGSSFMISPVLEQGKTEVEALFPPGSWYHMFDMTQAVVSKNGKRVTLPAPLNFVNVHLYQ 751          
BLAST of FC920791 vs. ExPASy Swiss-Prot
Match: AGLU_ORYSJ (Probable alpha-glucosidase Os06g0675700 OS=Oryza sativa subsp. japonica GN=Os06g0675700 PE=1 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 3.798e-89
Identity = 151/238 (63.45%), Postives = 188/238 (78.99%), Query Frame = 3
Query:    6 GVLEYDGHSIYGFSQSIATHKALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGSWYNVFDMTQAISSKDGKFVTLDAPLHVXNVHL 719
            GV EYD H+++GF ++ ATH ALL   G+RPF+LSRSTFVGSG Y AHWTGDN  TWEDL YSI+TML+FG+FG+PM+G+DICGF    TEELC+RWI++GAFYPFSRDH+   + R+ELY WESVA SAR ALG+RY+LLP+LYTL YEAH +GAPIARPLFFS+P  VE Y +  QFLLG  ++VSPVLE G + V A FP G W++++D + A+++K GK VTL AP    NVH+
Sbjct:  489 GVAEYDAHNLFGFLEARATHDALLRDTGRRPFVLSRSTFVGSGRYTAHWTGDNAATWEDLHYSINTMLSFGLFGIPMIGADICGFGGNTTEELCSRWIQLGAFYPFSRDHSAIGTVRRELYLWESVARSARKALGLRYRLLPYLYTLMYEAHTTGAPIARPLFFSYPGDVETYGIDRQFLLGRGVLVSPVLEPGATTVTAYFPAGRWFSLYDFSLAVATKTGKRVTLPAPADTVNVHV 726          
BLAST of FC920791 vs. ExPASy Swiss-Prot
Match: AGLU_HORVU (Alpha-glucosidase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 3.114e-83
Identity = 141/238 (59.24%), Postives = 182/238 (76.47%), Query Frame = 3
Query:    6 GVLEYDGHSIYGFSQSIATHKALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGSWYNVFDMTQAISSKDGKFVTLDAPLHVXNVHL 719
            GV EY+ H+++G  ++ AT + +L   G+RPF+LSRSTFVGSG Y A+WTGDN  TW DL+YSI+TML+FG+FG+PM+G+DICGF    TEELC RWI++GAFYPFSRDH+  ++ R+ELY W SVA S R ALG+RY+LLP+ YTL YEAH++GAPIARPLFFS+P+ V  Y V  QFLLG  ++VSPVLE G + V A FP G WY ++D + A++++ GK V L AP    NVHL
Sbjct:  483 GVTEYEEHNLFGLLEARATGRGVLRDTGRRPFVLSRSTFVGSGRYTAYWTGDNAATWGDLRYSINTMLSFGLFGMPMIGADICGFNGNTTEELCGRWIQLGAFYPFSRDHSAIFTVRRELYLWPSVAASGRKALGLRYQLLPYFYTLMYEAHMTGAPIARPLFFSYPHDVATYGVDRQFLLGRGVLVSPVLEPGPTTVDAYFPAGRWYRLYDYSLAVATRTGKHVRLPAPADTVNVHL 720          
BLAST of FC920791 vs. ExPASy Swiss-Prot
Match: AGLU_SPIOL (Alpha-glucosidase OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 3.443e-82
Identity = 139/235 (59.15%), Postives = 181/235 (77.02%), Query Frame = 3
Query:   15 EYDGHSIYGFSQSIATHKALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGSWYNVFDMTQAISSKDGKFVTLDAPLHVXNVHL 719
            EY+ H+++G+ ++  T  AL+ L  KRPF+LSRSTF GSG Y AHWTGDN  TW DL YSI +ML+FG+FG+PMVG+DICGF    TEELC RWI++GAFYPFSRDH++  +  QELY+WESVA SAR  LG+RY LLP+ YTL YEA L+G PIARPLFFSFP+ ++ Y +S+QFLLG  +MVSPVL+ G   V A FP G+W+++FD T+++++  G++VTL AP    NVH+
Sbjct:  516 EYNVHNLFGYLEARVTRAALIKLTEKRPFVLSRSTFSGSGKYTAHWTGDNAATWNDLVYSIPSMLDFGLFGIPMVGADICGFLGNTTEELCRRWIQLGAFYPFSRDHSSLGTTYQELYRWESVAASARKVLGLRYTLLPYFYTLMYEAQLNGIPIARPLFFSFPDDIKTYGISSQFLLGKGVMVSPVLKPGVVSVTAYFPRGNWFDLFDYTRSVTASTGRYVTLSAPPDHINVHI 750          
BLAST of FC920791 vs. ExPASy Swiss-Prot
Match: AGLU_BETVU (Alpha-glucosidase OS=Beta vulgaris PE=1 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 7.938e-79
Identity = 137/238 (57.56%), Postives = 178/238 (74.79%), Query Frame = 3
Query:    9 VLEYDGHSIYGFSQSIATHKALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGSWYNVFDMTQAISSKDGKFVTLDAPLHVXNVHLH 722
            V EY+ H++YGF +S AT +AL+    + PF+LSRSTF GSG Y AHWTGDN   W+DL+YSI TMLNFG+FG+PM+G+DICGF  + TEELC RWI++GAFYPFSRDH+   +  QELY WESVA SAR  LG+RY+LLP+ YTL Y+A+L G+PIARPL F+FP+ V  Y +S+QFL+G  +MVSPVL+ G S V A  P G+W ++ + T ++S   G +V+L AP    NVH+H
Sbjct:  518 VTEYNAHNLYGFLESQATREALVRPATRGPFLLSRSTFAGSGKYTAHWTGDNAARWDDLQYSIPTMLNFGLFGMPMIGADICGFAESTTEELCCRWIQLGAFYPFSRDHSARDTTHQELYLWESVAASARTVLGLRYELLPYYYTLMYDANLRGSPIARPLSFTFPDDVATYGISSQFLIGRGIMVSPVLQPGSSIVNAYSPRGNWVSLSNYTSSVSVSAGTYVSLSAPPDHINVHIH 755          
BLAST of FC920791 vs. ExPASy Swiss-Prot
Match: LYAG_MOUSE (Lysosomal alpha-glucosidase OS=Mus musculus GN=Gaa PE=1 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 3.351e-61
Identity = 115/252 (45.63%), Postives = 161/252 (63.89%), Query Frame = 3
Query:   18 YDGHSIYGFSQSIATHKALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESA-RNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGSWYNV-----------------FDMTQAISSKDGKFVTLDAPLHVXNVHL 719
            Y+ H++YG +++IA+ +AL+   G RPF++SRSTF G G YA HWTGD + +WE L YS+  +L F + GVP+VG+DICGF    +EELC RW ++GAFYPF R+H +  S  QE Y++   A+ A R A  +RY LLP+LYTL + AH+ G  +ARPLF  FP     ++V  Q L G +L+++PVLE GK++V   FP G+WYN+                      A+ SK G+++TL+APL   NVHL
Sbjct:  569 YNLHNLYGLTEAIASSRALVKTRGTRPFVISRSTFSGHGRYAGHWTGDVRSSWEHLAYSVPDILQFNLLGVPLVGADICGFIGDTSEELCVRWTQLGAFYPFMRNHNDLNSVPQEPYRFSETAQQAMRKAFALRYALLPYLYTLFHRAHVRGDTVARPLFLEFPEDPSTWSVDRQLLWGPALLITPVLEPGKTEVTGYFPKGTWYNMQMVSVDSLGTLPSPSSASSFRSAVQSK-GQWLTLEAPLDTINVHL 819          
BLAST of FC920791 vs. ExPASy Swiss-Prot
Match: LYAG_BOVIN (Lysosomal alpha-glucosidase OS=Bos taurus GN=GAA PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.663e-60
Identity = 116/253 (45.85%), Postives = 157/253 (62.06%), Query Frame = 3
Query:   18 YDGHSIYGFSQSIATHKALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESA-RNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGSWYNV--------------FDMTQAISSKDGKFVTLDAPLHVXNVHLHRIH 731
            YD H++YG ++++A+H+AL+   G RPF++SRSTF G G Y+ HWTGD    WE L YS+  +L F + GVP+VG+DICGF    +EELC RW ++GAFYPF R+H    S  QE Y++   A+ A R A  +RY LLP+LYTL + AH+ G  +ARPLF  FP     + V  Q L G +L+++PVLE  K +V   FP G+WY++                +T  I SK G++VTL APL   NVHL   H
Sbjct:  556 YDLHNLYGLTEALASHRALVKARGMRPFVISRSTFAGHGRYSGHWTGDVWSNWEQLSYSVPEILLFNLLGVPLVGADICGFLGNTSEELCVRWTQLGAFYPFMRNHNALNSQPQEPYRFSETAQQAMRKAFTLRYVLLPYLYTLFHRAHVRGETVARPLFLEFPEDPSTWTVDRQLLWGEALLITPVLEAEKVEVTGYFPQGTWYDLQTVPMEAFGSLPPPAPLTSVIHSK-GQWVTLSAPLDTINVHLRAGH 807          
BLAST of FC920791 vs. ExPASy Swiss-Prot
Match: LYAG_RAT (Lysosomal alpha-glucosidase OS=Rattus norvegicus GN=Gaa PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.838e-60
Identity = 114/251 (45.42%), Postives = 157/251 (62.55%), Query Frame = 3
Query:   18 YDGHSIYGFSQSIATHKALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESA-RNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGSWYNV----------------FDMTQAISSKDGKFVTLDAPLHVXNVHL 719
            Y+ H++YG +++IA+ +AL+   G RPF++SRSTF G G YA HWTGD   +WE L YS+  +L F + GVP+VG+DICGF    TEELC RW ++GAFYPF R+H +  S  QE Y++   A+ A R A  +RY LLP+LYTL + AH+ G  +ARPLF  FP     ++V  Q L G +L+++PVLE GK+ V   FP G WYN+                    ++I    G+++TL+APL   NVHL
Sbjct:  569 YNLHNLYGLTEAIASSRALVKTRGTRPFVISRSTFAGHGRYAGHWTGDVWSSWEHLAYSVPEILQFNLLGVPLVGADICGFQGNTTEELCVRWTQLGAFYPFMRNHNDLNSLPQEPYRFSETAQQAMRKAFTLRYALLPYLYTLFHGAHVKGDTVARPLFLEFPEDPSTWSVDRQLLWGPALLITPVLEPGKTDVTGYFPKGMWYNLQMVPVETLGSLPSSSPASSFRSIVHSKGQWLTLEAPLDTINVHL 819          
BLAST of FC920791 vs. ExPASy Swiss-Prot
Match: LYAG_HUMAN (Lysosomal alpha-glucosidase OS=Homo sapiens GN=GAA PE=1 SV=3)

HSP 1 Score: 229.565 bits (584), Expect = 1.408e-59
Identity = 113/250 (45.20%), Postives = 161/250 (64.40%), Query Frame = 3
Query:   18 YDGHSIYGFSQSIATHKALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESA-RNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGSWYNVFDM-TQAISS--------------KDGKFVTLDAPLHVXNVHL 719
            Y+ H++YG +++IA+H+AL+   G RPF++SRSTF G G YA HWTGD   +WE L  S+  +L F + GVP+VG+D+CGF    +EELC RW ++GAFYPF R+H +  S  QE Y +   A+ A R AL +RY LLP LYTL ++AH++G  +ARPLF  FP     + V  Q L G +L+++PVL+ GK++V   FP G+WY++  +  +A+ S               +G++VTL APL   NVHL
Sbjct:  569 YNLHNLYGLTEAIASHRALVKARGTRPFVISRSTFAGHGRYAGHWTGDVWSSWEQLASSVPEILQFNLLGVPLVGADVCGFLGNTSEELCVRWTQLGAFYPFMRNHNSLLSLPQEPYSFSEPAQQAMRKALTLRYALLPHLYTLFHQAHVAGETVARPLFLEFPKDSSTWTVDHQLLWGEALLITPVLQAGKAEVTGYFPLGTWYDLQTVPIEALGSLPPPPAAPREPAIHSEGQWVTLPAPLDTINVHL 818          
BLAST of FC920791 vs. ExPASy Swiss-Prot
Match: AGLU_MUCJA (Alpha-glucosidase OS=Mucor javanicus PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.408e-59
Identity = 114/238 (47.90%), Postives = 158/238 (66.39%), Query Frame = 3
Query:   18 YDGHSIYGFSQSIATHKALLGLEGK-RPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGSWYNVFDMTQAI---SSKDGKFVTLDAPLHVXNVHL 719
            YD H++YG ++S  T +AL+  + K RPF+L+RS+F GSG    HWTGDN   W  LK SI+ +LNF +FGV   G+D+CGF    TEELC RW+E+GAFYPF+R+H N  +  QE Y WES AE++R A+  RY++LP+ YTL  E++  G  + RPL F +P Y E  +   Q L+GS +++SPVL++GK+ VKA FP G WY+ +     +   S+K  K VTLDAPL    +H+
Sbjct:  519 YDIHNLYGHAESHITRQALIKHKNKIRPFVLTRSSFPGSGKSVGHWTGDNHSFWPYLKNSIANILNFQMFGVSYSGADVCGFNSDTTEELCTRWMEIGAFYPFARNHNNNAAKDQEPYLWESTAEASRIAINTRYEMLPYFYTLFEESNRLGLGVWRPLIFEYPAYEELVSNDVQTLVGSDILLSPVLDEGKTSVKAQFPGGQWYDWYTHELTVDNKSNKKVKTVTLDAPLTHIPIHI 756          
The following BLAST results are available for this feature:
BLAST of FC920791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
XYL1_ARATH7.097e-12082.16Alpha-xylosidase OS=Arabidopsis thaliana GN=XYL1 P... [more]
AGLU_ORYSJ3.798e-8963.45Probable alpha-glucosidase Os06g0675700 OS=Oryza s... [more]
AGLU_HORVU3.114e-8359.24Alpha-glucosidase OS=Hordeum vulgare PE=2 SV=1[more]
AGLU_SPIOL3.443e-8259.15Alpha-glucosidase OS=Spinacia oleracea PE=1 SV=1[more]
AGLU_BETVU7.938e-7957.56Alpha-glucosidase OS=Beta vulgaris PE=1 SV=1[more]
LYAG_MOUSE3.351e-6145.63Lysosomal alpha-glucosidase OS=Mus musculus GN=Gaa... [more]
LYAG_BOVIN1.663e-6045.85Lysosomal alpha-glucosidase OS=Bos taurus GN=GAA P... [more]
LYAG_RAT4.838e-6045.42Lysosomal alpha-glucosidase OS=Rattus norvegicus G... [more]
LYAG_HUMAN1.408e-5945.20Lysosomal alpha-glucosidase OS=Homo sapiens GN=GAA... [more]
AGLU_MUCJA1.408e-5947.90Alpha-glucosidase OS=Mucor javanicus PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC32013A12EF RVDevelop1 Citrus clementina cDNA clone C32013A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920791 ID=FC920791; Name=FC920791; organism=Citrus clementina; type=EST; length=740bp
ACAATGGTGTTCTCGAATATGATGGTCACAGTATTTATGGATTCTCTCAA
TCCATTGCAACTCACAAGGCTCTCCTAGGGCTTGAAGGCAAGAGGCCATT
CATATTATCACGCTCTACTTTTGTTGGTTCTGGTCATTATGCTGCACACT
GGACGGGTGATAATAAGGGAACATGGGAAGATCTAAAGTATTCTATTTCA
ACCATGCTGAACTTCGGCATATTTGGGGTTCCAATGGTTGGTTCCGATAT
ATGTGGGTTCTATCCTGCCCCAACAGAAGAGCTTTGTAACCGATGGATAG
AAGTAGGTGCATTCTATCCGTTCTCAAGGGATCATGCAAACTACTACTCC
CCAAGACAGGAGCTTTATCAGTGGGAGTCAGTAGCAGAGTCCGCCCGAAA
TGCTCTGGGTATGAGGTATAAACTACTTCCTTTCCTGTACACGTTGAACT
ATGAAGCCCATTTAAGTGGAGCTCCAATAGCCAGGCCACTTTTCTTCTCA
TTCCCAAATTATGTCGAGTGTTACAATGTGAGCACCCAGTTCTTGCTGGG
GAGCAGCCTGATGGTTTCTCCAGTGCTTGAGCAGGGGAAGTCACAGGTTA
AAGCACTCTTTCCTCCAGGTAGTTGGTACAATGTGTTTGATATGACACAA
GCCATTTCATCGAAAGATGGGAAATTTGTTACGCTTGATGCACCTTTACA
TGTGGNTAACGTGCACTTGCACAGAATACATCCTTCCATG
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