FC920795

Overview
NameFC920795
Unique NameFC920795
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14200 contig Ccv1_Contig14200:1..691. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS7_PICMA (Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.299e-37
Identity = 86/202 (42.57%), Postives = 121/202 (59.90%), Query Frame = 1
Query:   73 MGSLAGFAN-KASPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            M  L  F   + + G ATILA+G A P   V Q    D YFK TN +   ELK+K  R+C  + +K RY+ ++DEILK+ P +     P++  R D+    V ++  EA+   IK WG+P + ITHV++ ++S   +PG D  L + LGL P  +RVM+Y  GC  G + LRVAKD+AENN G+RVL+  SE T + F+ PS
Sbjct:    6 MADLEAFRKAQRADGPATILAIGTATPPNAVDQSTYPDYYFKITNSEHMTELKEKFQRMCDKSAIKKRYMYLTDEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAATKAIKEWGQPKSKITHVIFCTTSGVDMPGADYQLTKLLGLRPSVKRVMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPS 207          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS2_IPOBA (Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF2 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.122e-37
Identity = 81/188 (43.09%), Postives = 117/188 (62.23%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G ATILA+G   P   V Q    D YF+ TN +   ELK+K  R+C  + +  RY+ +++EILK+ P       P++  R DI    V ++  EA+Q+ IK WG+P + ITHVV+ ++S   +PG D  L + LGLSP  +R+M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T++ F+ PS
Sbjct:   15 GPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLSPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPS 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHSY_PINSY (Chalcone synthase OS=Pinus sylvestris GN=CHS PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.690e-37
Identity = 82/188 (43.62%), Postives = 117/188 (62.23%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G ATILA+G A P   V Q    D YFK TN +   ELK+K  R+C  + +K RY+ +++EILK+ P++     P++  R D+    V ++  EA+   IK WG+P + ITHV++ ++S   +PG D  L + LGL P  +RVM+Y  GC  G + LRVAKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   20 GPATILAIGTATPPNAVDQSSYPDYYFKITNSEHMTELKEKFRRMCDKSAIKKRYMYLTEEILKENPKVCEYMAPSLDARQDMVVVEVPRLGKEAAAKAIKEWGQPKSKITHVIFCTTSGVDMPGADYQLTKLLGLRPSVKRVMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPS 207          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS6_IPOBA (Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DII PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.690e-37
Identity = 81/188 (43.09%), Postives = 117/188 (62.23%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G ATILA+G A P   V Q    D YF+ TN +   ELK+K  R+C  + +  RY+ +++EILK+ P       P++  R DI    V ++  EA+Q+ IK WG+P + ITHVV+ ++S   +PG D  L + LGL P  +R+M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T++ F+ PS
Sbjct:   15 GPATILAIGTATPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPS 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS3_IPOBA (Chalcone synthase LF3 OS=Ipomoea batatas GN=CHS-LF3 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.690e-37
Identity = 81/188 (43.09%), Postives = 117/188 (62.23%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G ATILA+G A P   V Q    D YF+ TN +   ELK+K  R+C  + +  RY+ +++EILK+ P       P++  R DI    V ++  EA+Q+ IK WG+P + ITHVV+ ++S   +PG D  L + LGL P  +R+M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T++ F+ PS
Sbjct:   15 GPATILAIGTATPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKGWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPS 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS7_IPOBA (Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-DIII PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 8.738e-37
Identity = 81/192 (42.19%), Postives = 118/192 (61.46%), Query Frame = 1
Query:  100 KASPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            K + G ATILA+G A P   V Q    D YF+ TN +   ELK+K  R+C  + +  RY+ +++EILK+ P       P++  R DI    V ++  EA+Q+ IK WG+P + ITHV + ++S   +PG D  L + LGL P  +R+M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T++ F+ PS
Sbjct:   11 KRAEGPATILAIGTATPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVFFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPS 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: THS4_VITVI (Stilbene synthase 4 OS=Vitis vinifera GN=GSVIVT00005194001 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.490e-36
Identity = 76/190 (40.00%), Postives = 117/190 (61.58%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPSAE 678
            G AT+LA+G A P   + Q    D YF+ T  +   ELK+K  R+C  + +K RY+ +++E+L+++P +     P++  R +I    V ++  EA+   +K WG+P + ITH+V+ ++S   +PG D  LA  LGL P  +RVMLY  GC  G + LR AKD+AENN G+RVL+  SE T++ F+ PS +
Sbjct:   15 GPATVLAIGTATPDNCLYQSDFADYYFRVTKSEHMTELKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTFRGPSED 204          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHSB_SOLTU (Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.490e-36
Identity = 81/188 (43.09%), Postives = 118/188 (62.77%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G ATILA+G + P   V Q    D YF+ TN +   ELK+K  R+C  + +K RY+ +++EILK+ P +     P++  R DI    V ++  EA+Q  IK WG+P + ITH+V+ ++S   +PG D  LA+ LGL P  +R+M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   15 GPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGCDYQLAKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPS 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHSA_IPONI (Chalcone synthase A (Fragment) OS=Ipomoea nil GN=CHSA PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.490e-36
Identity = 82/195 (42.05%), Postives = 118/195 (60.51%), Query Frame = 1
Query:  100 KASPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPSAER 681
            K   G A ILA+G A P   V Q    D YF+ TN +   E K+K  R+C  + ++ R++V+++E+LKK P L      ++  R DI    V ++  EA+   IK WGRPI++ITH+V+ +SS   +PG D  LA+ LGLS    R+M+Y  GC+ G + LR+AKD+AENN G RVL+  SE  +  F+ PS E+
Sbjct:   14 KRIEGHAKILAIGTAIPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHLVITEELLKKNPNLCTYNEASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTSSGVDMPGADFQLAKLLGLSSSVNRLMMYQQGCNAGAAMLRLAKDLAENNKGGRVLVVCSEVMLNVFRGPSLEQ 208          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: THS7_VITVI (Stilbene synthase 6 OS=Vitis vinifera GN=STS PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.542e-36
Identity = 80/204 (39.22%), Postives = 123/204 (60.29%), Query Frame = 1
Query:   73 MGSLAGFAN-KASPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPSAE 678
            M S+  F N + + G ATILA+G A P   V Q    D YF+ T  +   ELK+K  R+C  + +K RY+ +++E+L+++P +     P++  R +I    V ++  +A+   +K WG+P + ITH+V+ ++S   +PG D  LA  LGL    +RVMLY  GC  G + LR AKD+AENN G+RVL+  SE T++ F+ PS +
Sbjct:    1 MASVEEFRNAQRAKGPATILAIGTATPDHCVYQSDYADYYFRVTKSEHMTELKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPRLGRDAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLETSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTFRGPSED 204          
The following BLAST results are available for this feature:
BLAST of FC920795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
CHS7_PICMA2.299e-3742.57Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 ... [more]
CHS2_IPOBA5.122e-3743.09Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF... [more]
CHSY_PINSY6.690e-3743.62Chalcone synthase OS=Pinus sylvestris GN=CHS PE=3 ... [more]
CHS6_IPOBA6.690e-3743.09Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DI... [more]
CHS3_IPOBA6.690e-3743.09Chalcone synthase LF3 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS7_IPOBA8.738e-3742.19Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-D... [more]
THS4_VITVI1.490e-3640.00Stilbene synthase 4 OS=Vitis vinifera GN=GSVIVT000... [more]
CHSB_SOLTU1.490e-3643.09Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B... [more]
CHSA_IPONI1.490e-3642.05Chalcone synthase A (Fragment) OS=Ipomoea nil GN=C... [more]
THS7_VITVI2.542e-3639.22Stilbene synthase 6 OS=Vitis vinifera GN=STS PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionC32013B05EF RVDevelop1 Citrus clementina cDNA clone C32013B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920795 ID=FC920795; Name=FC920795; organism=Citrus clementina; type=EST; length=691bp
GACTGTGGATTCAGGCAGTTTTCCCACACCTCCTGAAAGTTTCATCAACG
TTTCTTTTGATAGAGAAGAAGCATGGGCAGCTTAGCAGGTTTCGCAAATA
AGGCAAGCCCTGGCAAAGCTACCATTCTGGCTCTTGGCAAGGCTTTCCCT
CACCAACTTGTCATGCAGGAATTTCTGGTTGATGGGTACTTCAAGAACAC
CAACTGTGATGATCCCGAGCTCAAGCAGAAGCTAACCCGACTCTGCAAGA
CAACAACGGTTAAAACAAGATATGTAGTCATGTCAGACGAGATCCTGAAG
AAATATCCTGAGCTTGCCATAGAAGGCCTTCCTACTGTGAAGCAAAGGCT
TGATATCTGCAACAAAGCTGTCACCCAAATGGCCATTGAAGCTTCACAAG
CTTGCATCAAGAGCTGGGGCAGGCCAATAACAGACATAACCCACGTAGTT
TATGTCTCCTCAAGTGAAGCTCGGCTGCCTGGGGGTGATCTCTACTTGGC
AAGAGGCCTTGGACTCAGTCCTGAGACTCAGCGTGTCATGCTCTACTTCA
TGGGCTGCTCTGGTGGAGTTTCTGGCCTGCGTGTGGCGAAGGACATTGCT
GAAAACAATCCTGGAAGCAGAGTTCTGCTAGCTACTTCCGAAACTACAAT
TATTGAGTTCAAGCCACCAAGTGCAGAAAGGCCATATGACT
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