FC920919

Overview
NameFC920919
Unique NameFC920919
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14609 contig Ccv1_Contig14609:344..1054. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920919 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.270e-54
Identity = 108/210 (51.43%), Postives = 140/210 (66.67%), Query Frame = 1
Query:   52 DQSFAYATQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSL---DASGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGITLQPSLPSTPILR 672
            D+   +A QL   ++LPM ++T  EL + EI+ K GPGA L  SDIA+ L TKN DAP+MLDRILRLLASYS++ CSL         RLY L SV K+   N+DGV + PL  + QDKV ++SW  LKDAILEGGIPFN+A+G+  FEY G DP+FNK FN  M +++ + M  ILESYKGF+ +  LVDVGG  G  +   +   P ++
Sbjct:   16 DEEANFAMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPDAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYKGFEGLASLVDVGGGTGAVVSTIVSKYPSIK 225          
BLAST of FC920919 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.842e-53
Identity = 100/215 (46.51%), Postives = 147/215 (68.37%), Query Frame = 1
Query:   37 VDGERDQSFAYATQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGITLQPSLPSTPILR 672
            ++ + +++F +A QLA  ++LPM +++  EL + E++ K G GA +  +++AAQLLT N +A +MLDRILRLL SY+++EC L      G +RLY L  V K+   N+DGV + PL  + QDKV ++SW  LKDA+L+GGIPFN+A+G+  FEY G DP+FNK FN  M N++++ M  ILE+Y GFD +K +VDVGG  G TL   +   P ++
Sbjct:   10 INSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQLLTTNAEAHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIISKYPSIK 224          
BLAST of FC920919 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.104e-53
Identity = 104/212 (49.06%), Postives = 146/212 (68.87%), Query Frame = 1
Query:   46 ERDQSFAYATQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGITLQPSLPSTPILR 672
            E +++   A +LA  ++LPM +++  EL + E++ K GPGA +  S++AAQL T+N DAP+MLDRILRLLASYSV+ C+L      G  RLYSL  V K+   N+DGV +  L+ + QDKV ++SW  LKDA+LEGGIPFN+A+G+  FEY G DP+FNK FN  M N+++++M  ILE Y+GF  +K +VDVGG  G TL   +   P ++
Sbjct:   15 EEEEACLSAMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQNPDAPVMLDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSIK 226          
BLAST of FC920919 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.360e-53
Identity = 105/210 (50.00%), Postives = 142/210 (67.62%), Query Frame = 1
Query:   52 DQSFAYATQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGITLQPSLPSTPILR 672
            +++  +A QLA  ++LPM ++T  EL + EI+ K GPGA L  S+IA+ L TKN DAP+MLDRILRLLASYS++ CSL         RLY L  V K+   N+DGV + PL  + QDKV ++SW  LKDAILEGGIPFN+A+G+  FEY G DP+FNK FN  M +++++ M  ILE+YKGF+ +  LVDVGG  G  +   +   P ++
Sbjct:   17 EEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIK 226          
BLAST of FC920919 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.143e-53
Identity = 100/210 (47.62%), Postives = 144/210 (68.57%), Query Frame = 1
Query:   52 DQSFAYATQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGITLQPSLPSTPILR 672
            +++  +A  LA  ++LPM +++  EL + E++ K GPGA +  S++AAQL T N +AP+MLDRILRLLA+YSV++C L+     G  RLY L  V K+   N DGV + PL+ + QDKV ++SW  LKDA+L+GGIPFN+A+G+  FEY G DP+FNK FN  M N++++ M  ILE Y+GF+ +K +VDVGG  G TL   +   P ++
Sbjct:    4 EEACLFAMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQLPTHNPEAPIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTIK 213          
BLAST of FC920919 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.194e-52
Identity = 104/210 (49.52%), Postives = 142/210 (67.62%), Query Frame = 1
Query:   52 DQSFAYATQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGITLQPSLPSTPILR 672
            +++  +A QLA  ++LPM ++T  EL + EI+ K GPGA L  S+IA+ L TKN DAP+MLDRILRLLASYS++ CSL         RLY L  V K+   N+DGV + PL  + QDKV ++SW  LKDAIL+GGIPFN+A+G+  FEY G DP+FNK FN  M +++++ M  ILE+YKGF+ +  LVDVGG  G  +   +   P ++
Sbjct:   17 EEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIK 226          
BLAST of FC920919 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 1.560e-52
Identity = 100/210 (47.62%), Postives = 143/210 (68.10%), Query Frame = 1
Query:   52 DQSFAYATQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGITLQPSLPSTPILR 672
            D++F +A QLA  ++LPM +++  EL + EI+ K GPGA +  S++AAQL TKN +AP+MLDR+LRLLA+YSV+ C+L         RLYSL  V K    N DGV + PL+ + QDKV ++SW  L DA+L+GG+PFN+A+G+  FEY G DP+FNK FN  M +++++ M  ILE YKGF+ +  +VDVGG  G T+   +   P ++
Sbjct:   13 DEAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKILEDYKGFEGLNSIVDVGGGTGATVNMIVSKYPSIK 222          
BLAST of FC920919 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.538e-52
Identity = 106/210 (50.48%), Postives = 139/210 (66.19%), Query Frame = 1
Query:   52 DQSFAYATQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSL---DASGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGITLQPSLPSTPILR 672
            D+   +A QL   ++LPM ++T  EL + EI+ K GPGA L  SDIA+ L TKN +AP+MLDRILRLLASYS++ CSL         RLY L SV K+   N+DGV + PL  + QDKV ++SW  LKDAILEGGIPFN+A+G+  FEY G DP+FNK FN  M  ++ + M  ILE+YKGF+ +  LVDVGG  G  +   +   P ++
Sbjct:   16 DEEANFALQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKILETYKGFEGLASLVDVGGGTGAVVSTIVSKYPSIK 225          
BLAST of FC920919 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.740e-52
Identity = 99/215 (46.05%), Postives = 143/215 (66.51%), Query Frame = 1
Query:   37 VDGERDQSFAYATQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGITLQPSLPSTPILR 672
            ++ + +++F +A QLA  ++LPM +++  EL + E++ K G GA +   D+AAQL T N DA +MLDRILRLL SY+++EC L      G  RLY L  V K+   N+DGV + PL  + QDKV ++SW  L DA+++GGIPFN+A+G+  FEY G DP+FNK FN  M N++++ M  ILE+Y GFD +K +VDVGG  G TL   +   P ++
Sbjct:   10 INSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKSGAGAFVSPVDLAAQLPTTNPDAHVMLDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSIK 224          
BLAST of FC920919 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.320e-51
Identity = 103/210 (49.05%), Postives = 144/210 (68.57%), Query Frame = 1
Query:   52 DQSFAYATQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECS---LDASGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGITLQPSLPSTPILR 672
            D++  +A QLA  ++LPMA+++  EL + EI+ K   G+ +  ++IA++L TKN +AP+MLDRILRLL SYSV+ CS   L   G  R+Y L  V KY   N+DGV +  L  + QDKV ++SW  LKDAIL+GGIPFN+A+G+  FEY G DP+FNK FN  M N++++ M  ILE+YKGF+ +  LVDVGG +G TL+  +   P L+
Sbjct:   17 DEAALFAMQLASASVLPMALKSALELDLLEIMAK--NGSPMSPTEIASKLPTKNPEAPVMLDRILRLLTSYSVLTCSNRKLSGDGVERIYGLGPVCKYLTKNEDGVSIAALCLMNQDKVLMESWYHLKDAILDGGIPFNKAYGMSAFEYHGTDPRFNKVFNNGMSNHSTITMKKILETYKGFEGLTSLVDVGGGIGATLKMIVSKYPNLK 224          
The following BLAST results are available for this feature:
BLAST of FC920919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
COMT3_POPKI8.270e-5451.43Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT2_OCIBA1.842e-5346.51Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_CATRO4.104e-5349.06Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_POPKI5.360e-5350.00Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_COFCA9.143e-5347.62Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_POPTM1.194e-5249.52Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_CAPAN1.560e-5247.62Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT2_POPTM4.538e-5250.48Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_OCIBA7.740e-5246.05Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
OMT1_ARATH1.320e-5149.05Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionC32014G09EF RVDevelop1 Citrus clementina cDNA clone C32014G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920919 ID=FC920919; Name=FC920919; organism=Citrus clementina; type=EST; length=710bp
TAGGAGAAATTCTCGAAACTTAAAAAGGATTCTATAGTTGATGGAGAAAG
AGACCAAAGCTTTGCATATGCTACTCAATTGGCGATGGGTACAATGCTAC
CCATGGCCATTCAAACGGTGTATGAGCTAGGCATTTTCGAGATCCTAGAC
AAAGTTGGTCCTGGTGCAAAGCTCTGTGCTTCAGATATTGCAGCCCAATT
GCTCACCAAGAACAAAGACGCACCCATGATGCTGGATCGGATTCTCAGGC
TTCTGGCTAGCTACAGCGTTGTTGAATGCTCACTTGATGCTTCTGGTGCC
CGGAGACTATATAGTTTGAATTCTGTCTCCAAATACTATGTGCCTAACAA
AGATGGCGTCTTACTAGGACCCCTAATACAAATAGTTCAGGACAAGGTCT
TTCTGAAGAGCTGGTCCCAACTCAAAGATGCTATTCTTGAAGGAGGAATT
CCATTTAATCGAGCCCATGGAGTGCATGTATTTGAGTACGCAGGATTGGA
CCCTAAGTTCAATAAACATTTTAACACAGCAATGTATAACTATACCTCTC
TGGTTATGAGCAACATTCTTGAATCTTACAAGGGTTTCGACAACATCAAG
CAACTGGTCGATGTTGGTGGTAGTCTCGGCATTACTCTTCAGCCATCACT
ACCAAGTACCCCTATATTAAGGGCATCAATTTCGACCAGCCTCATGTTAT
TGACCATGCC
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