FC920963

Overview
NameFC920963
Unique NameFC920963
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL3_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhizopus oryzae GN=cyp4 PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.436e-54
Identity = 108/166 (65.06%), Postives = 120/166 (72.29%), Query Frame = 1
Query:   40 MSVTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXX------SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFE-VLDLMEKAQTGSGDRPLAEIRINRVTIHANPLA 516
            MSVTLHT+LGDIK  + C+ VPKTAENFLALCASGYYD   FHRNI GFMIQ                  SIWGKKFNDEIR +LKHN+RGI+SMANSGPNTNGSQFFI+YAK PHL+  YTV G+VI G +  LD+MEK       RPL E RI  VTIHANP+A
Sbjct:    1 MSVTLHTDLGDIKIEVFCEAVPKTAENFLALCASGYYDNNTFHRNIPGFMIQVHEHLHTGDPTGTGKGGNSIWGKKFNDEIRSTLKHNSRGIVSMANSGPNTNGSQFFITYAKHPHLDTKYTVFGKVIDGADSTLDMMEKVPVDEKHRPLQEFRIKSVTIHANPIA 166          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL3_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryptococcus neoformans GN=CYP10 PE=3 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 2.078e-52
Identity = 97/159 (61.01%), Postives = 121/159 (76.10%), Query Frame = 1
Query:   40 MSVTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANPLA 516
            MSVTLHTNLGDIK  + C+ VP+TAENFLALCASG YDGT+FHRNI+GFMIQ            SIWG+ F+DEIR++L+ N RG+++MAN+GP+TN SQFFI+YAKQP L+G Y++ G+VI G E LD MEK       RPL EI++  VT+HANP+A
Sbjct:    1 MSVTLHTNLGDIKIELFCESVPRTAENFLALCASGQYDGTLFHRNIRGFMIQGGDPTGTGKGGQSIWGRPFSDEIRQTLRFNNRGMVAMANAGPDTNKSQFFITYAKQPSLDGKYSIFGKVIDGMETLDSMEKTPVNPKSRPLQEIKLLNVTVHANPIA 159          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL3_DICDI (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Dictyostelium discoideum GN=ppil3 PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.297e-51
Identity = 102/159 (64.15%), Postives = 113/159 (71.07%), Query Frame = 1
Query:   40 MSVTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANPLA 516
            MSVTLHT+LGDIK  I CD VP  +ENFLALCAS YY+ TIFHRNIKGFMIQ            SIW K+F DE    LKHN RGILSMANSGP+TNGSQFFI+Y K   LN +YTV G++I G EVLDLMEK      D PL EI +  VTIHANP+A
Sbjct:    1 MSVTLHTSLGDIKVEIFCDSVPLASENFLALCASNYYNNTIFHRNIKGFMIQGGDPTNTGRGGESIWKKQFKDEFPSHLKHNTRGILSMANSGPDTNGSQFFITYGKHRSLNKVYTVFGKIIAGIEVLDLMEKVPVDDKDLPLNEIILKSVTIHANPIA 159          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL3_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo sapiens GN=PPIL3 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.000e-51
Identity = 98/160 (61.25%), Postives = 114/160 (71.25%), Query Frame = 1
Query:   40 MSVTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGD-RPLAEIRINRVTIHANPLA 516
            MSVTLHT++GDIK  + C+  PKT ENFLALCAS YY+G IFHRNIKGFM+Q            SIWGKKF DE  E LKHN RG++SMAN+GPNTNGSQFFI+Y KQPHL+  YTV G+VI G E LD +EK        RPL ++ I  +TIHANP A
Sbjct:    1 MSVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFA 160          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL3_RAT (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rattus norvegicus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.919e-51
Identity = 97/160 (60.62%), Postives = 114/160 (71.25%), Query Frame = 1
Query:   40 MSVTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGD-RPLAEIRINRVTIHANPLA 516
            MSVTLHT++GDIK  + C+  PKT ENFLALCAS YY+G +FHRNIKGFM+Q            SIWGKKF DE  E LKHN RG++SMAN+GPNTNGSQFFI+Y KQPHL+  YTV G+VI G E LD +EK        RPL ++ I  +TIHANP A
Sbjct:    1 MSVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCVFHRNIKGFMVQTGDPTGTGRGGSSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFA 160          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL3_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus musculus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.945e-50
Identity = 96/160 (60.00%), Postives = 113/160 (70.62%), Query Frame = 1
Query:   40 MSVTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGD-RPLAEIRINRVTIHANPLA 516
            MSVTLHT++GDIK  + C+  PKT ENFLALCAS YY+G +FHRNIKGFM+Q            SIW KKF DE  E LKHN RG++SMAN+GPNTNGSQFFI+Y KQPHL+  YTV G+VI G E LD +EK        RPL ++ I  +TIHANP A
Sbjct:    1 MSVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCVFHRNIKGFMVQTGDPTGTGRGGSSIWAKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFA 160          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL3_CHICK (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gallus gallus GN=PPIL3 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.540e-50
Identity = 95/161 (59.01%), Postives = 115/161 (71.43%), Query Frame = 1
Query:   40 MSVTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGD-RPLAEIRINRVTIHANPLAV 519
            M+VTLHT++GDIK  + C+  PKT ENFLALCAS YY+G +FHRNIKGFM+Q            SIWGKKF DE  E LKH+ RG++SMAN+GPNTNGSQFFI+Y KQPHL+  YTV G+VI G E LD +EK        RPL ++ I  +TIHANP A+
Sbjct:    1 MAVTLHTDVGDIKIELFCERTPKTCENFLALCASNYYNGCVFHRNIKGFMVQTGDPLGTGKGGTSIWGKKFEDEFSEYLKHSVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFAL 161          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL3_USTMA (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ustilago maydis GN=CYP10 PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.104e-45
Identity = 91/163 (55.83%), Postives = 114/163 (69.94%), Query Frame = 1
Query:   40 MSVTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFE---VLDLMEKAQTGSGDRPLAEIRINRVTIHANPLAV 519
            MSVTLHTN+GDIK  + CD  P+ AENFL  CA+G Y+   +HRNIK FMIQ            SIWGK F DEIR SLK + RGI++ AN+GP+TN SQFFI+YAKQPHL+G YT++G+VI G E    LD ME     + +RP +EIR+  VT+HANP+A+
Sbjct:    1 MSVTLHTNVGDIKVEVFCDATPRAAENFLGHCAAGTYNDVKWHRNIKSFMIQTGDPTGTGKGGQSIWGKPFADEIRSSLKFDRRGIVACANAGPDTNKSQFFITYAKQPHLDGKYTIIGKVIDGAEDGGTLDAMEAIPVDAKNRPTSEIRMTGVTVHANPIAI 163          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: CYP10_CAEEL (Peptidyl-prolyl cis-trans isomerase 10 OS=Caenorhabditis elegans GN=cyn-10 PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 6.060e-44
Identity = 87/159 (54.72%), Postives = 110/159 (69.18%), Query Frame = 1
Query:   40 MSVTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANPLA 516
            MSVTLHT  GDIK  +  D+ PK  ENFLALCAS YY+G IFHRNIK FM+Q            SIWG  F DE   +LKH++RG +SMAN+GP++N SQFFI+YAKQ HL+  YT+ G+VI GF+ L+ +E  +  +  RPL + +I  VTIHANP+A
Sbjct:    1 MSVTLHTTSGDIKIELYVDDAPKACENFLALCASDYYNGCIFHRNIKDFMVQTGDPTHSGKGGESIWGGPFEDEFVSALKHDSRGCVSMANNGPDSNRSQFFITYAKQAHLDMKYTLFGKVIDGFDTLEEIETIKVDNKYRPLVQQKIQNVTIHANPMA 159          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL3_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibberella zeae GN=CYP10 PE=3 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 3.007e-43
Identity = 95/166 (57.23%), Postives = 107/166 (64.46%), Query Frame = 1
Query:   40 MSVTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXX-----SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVI--HGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANPLA 516
            MSVTLHT+ GDIK  I C+ VPKTAENFLALC SGYYD + FHR I  FM Q                 SIWG  F DEIR +L+H ARG+LSMAN GP TNGSQFFI++ K PHL+GL TV GRVI   G   L  ME  +    +RP   +RI  VTIHANPLA
Sbjct:    1 MSVTLHTSHGDIKVEIYCESVPKTAENFLALCGSGYYDKSPFHRVIPKFMAQTGAPATPNPPENPKGGRSIWGGAFEDEIRPALRHGARGVLSMANKGPGTNGSQFFITFDKAPHLDGLNTVFGRVIGDEGLATLAKMEAVEVDRKNRPKEPVRIENVTIHANPLA 166          
The following BLAST results are available for this feature:
BLAST of FC920963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 261
Match NameE-valueIdentityDescription
PPIL3_RHIOR8.436e-5465.06Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhiz... [more]
PPIL3_CRYNE2.078e-5261.01Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryp... [more]
PPIL3_DICDI2.297e-5164.15Peptidyl-prolyl cis-trans isomerase-like 3 OS=Dict... [more]
PPIL3_HUMAN3.000e-5161.25Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo... [more]
PPIL3_RAT3.919e-5160.63Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ratt... [more]
PPIL3_MOUSE1.945e-5060.00Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus ... [more]
PPIL3_CHICK2.540e-5059.01Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gall... [more]
PPIL3_USTMA1.104e-4555.83Peptidyl-prolyl cis-trans isomerase-like 3 OS=Usti... [more]
CYP10_CAEEL6.060e-4454.72Peptidyl-prolyl cis-trans isomerase 10 OS=Caenorha... [more]
PPIL3_GIBZE3.007e-4357.23Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibb... [more]

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Properties
Property NameValue
Genbank descriptionC32201D07EF RVDevelopN Citrus clementina cDNA clone C32201D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920963 ID=FC920963; Name=FC920963; organism=Citrus clementina; type=EST; length=722bp
GATATAAATTCTGAGCTTTGGTTTGGCGTAGGCGGTAAGATGTCGGTAAC
TCTACACACTAATCTGGGTGATATTAAGTGCGGGATTGCTTGCGACGAAG
TCCCTAAGACGGCTGAGAATTTTTTGGCACTATGCGCGAGTGGTTACTAC
GATGGGACCATTTTTCACCGGAATATTAAAGGTTTTATGATTCAAGGTGG
AGACCCAACAGGCACTGGAAAAGGCGGAACAAGCATATGGGGCAAGAAGT
TCAATGATGAGATAAGGGAGTCCCTCAAGCATAATGCTAGAGGGATACTG
TCAATGGCCAATAGTGGCCCTAACACTAATGGAAGCCAATTCTTCATCTC
TTATGCAAAGCAGCCCCATCTTAACGGATTGTACACTGTGCTTGGTAGAG
TAATTCATGGGTTCGAAGTTCTTGACCTTATGGAAAAGGCTCAAACTGGA
TCAGGGGACCGGCCACTTGCGGAGATAAGGATCAATCGAGTTACCATACA
TGCTAACCCACTTGCTGTCTAGCTTTGTCTGAAAATTTCTTGTTGTATAA
CATTGTAAAGAGGCTTAGTGTGGAGTGGGAACAGTGACTTACGATTAAAC
TCCCAGTAGACTCTGTACATTTTTCTTTTCCCAGTTATGACTATGGGCTT
GAAGGAAGAAAGTACCGCAGAATTTTATGTAGCATCAAATGGTGAGATTG
ACGATTGAGAAACGTTAGTAAT
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