FC920986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920986 vs. ExPASy Swiss-Prot
Match: RLA31_ARATH (60S acidic ribosomal protein P3-1 OS=Arabidopsis thaliana GN=RPP3A PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.976e-25 Identity = 58/72 (80.56%), Postives = 65/72 (90.28%), Query Frame = 1 Query: 79 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVTPTSAVFQVIIGG 294 MGVFT+VC+ GG WS KQ EG +LE+SA+STYELQRKLVQ SLSADSSGGVQSSFSLV+PTSAVFQVI+GG Sbjct: 1 MGVFTFVCKNGGGAWSAKQHEG-ELESSASSTYELQRKLVQVSLSADSSGGVQSSFSLVSPTSAVFQVIVGG 71
BLAST of FC920986 vs. ExPASy Swiss-Prot
Match: RLA32_ARATH (60S acidic ribosomal protein P3-2 OS=Arabidopsis thaliana GN=RPP3B PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.782e-25 Identity = 57/72 (79.17%), Postives = 66/72 (91.67%), Query Frame = 1 Query: 79 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVTPTSAVFQVIIGG 294 MGVF++VC+ GGEW+ KQ EG DLEASA+STY+LQRKLVQT+LSADSSGGVQSSFSLV+PTSAVF V+IGG Sbjct: 1 MGVFSFVCKSKGGEWTAKQHEG-DLEASASSTYDLQRKLVQTALSADSSGGVQSSFSLVSPTSAVFVVVIGG 71
BLAST of FC920986 vs. ExPASy Swiss-Prot
Match: RLA3_MAIZE (60S acidic ribosomal protein P3 OS=Zea mays GN=RPP3A PE=1 SV=3) HSP 1 Score: 98.9821 bits (245), Expect = 2.020e-21 Identity = 48/71 (67.61%), Postives = 60/71 (84.51%), Query Frame = 1 Query: 79 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVTPTSAVFQVIIG 291 MGV+T+VCR NGGEW+ KQ G++EASAA+ YELQR+LV + +ADS GVQSSFS+VTP+SAVFQVI+G Sbjct: 1 MGVYTFVCRNNGGEWTAKQ-HSGEIEASAATPYELQRRLVAAASAADSRYGVQSSFSMVTPSSAVFQVIVG 70 HSP 2 Score: 24.2534 bits (51), Expect = 2.020e-21 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 411 DEDMGFSLFD 440 D+DMGFSLFD Sbjct: 111 DDDMGFSLFD 120
BLAST of FC920986 vs. ExPASy Swiss-Prot
Match: RLA3_ORYSJ (60S acidic ribosomal protein P3 OS=Oryza sativa subsp. japonica GN=Os06g0701400 PE=3 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 4.753e-20 Identity = 47/71 (66.20%), Postives = 62/71 (87.32%), Query Frame = 1 Query: 79 MGVFTYVCRKNGGEWSGKQIEGGDLEASAASTYELQRKLVQTSLSADSSGGVQSSFSLVTPTSAVFQVIIG 291 MGV+T+VCR +G EW+ KQ++G +LEASAA+ YELQR+LV + +ADS+ GVQSSFS+V+P+SAVFQVIIG Sbjct: 1 MGVYTFVCRSSGDEWTAKQLKG-ELEASAATPYELQRRLVAAASAADSAAGVQSSFSMVSPSSAVFQVIIG 70 HSP 2 Score: 21.557 bits (44), Expect = 4.753e-20 Identity = 7/10 (70.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 411 DEDMGFSLFD 440 ++D+GFSLFD Sbjct: 110 EDDLGFSLFD 119 The following BLAST results are available for this feature:
BLAST of FC920986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920986 ID=FC920986; Name=FC920986; organism=Citrus clementina; type=EST; length=646bpback to top |