FC920987
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920987 vs. ExPASy Swiss-Prot
Match: COBRA_ARATH (Protein COBRA OS=Arabidopsis thaliana GN=COB PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.221e-25 Identity = 53/88 (60.23%), Postives = 62/88 (70.45%), Query Frame = 1 Query: 1 QAMMTWNVTCTYSQFLAQKTPTCCVSLSSFNNETTVSCPTCACGCQNNGTESGSCIKNALPEINNSSSTGSRD*AVCCXXXXXXRYQC 264 QAMMTWN+TCTYSQFLAQ+TPTCCVSLSSF NET V CPTCACGCQNN TESG+C+ P + + S ++ V R+ C Sbjct: 211 QAMMTWNITCTYSQFLAQRTPTCCVSLSSFYNETIVGCPTCACGCQNNRTESGACLDPDTPHLASVVSPPTKKGTVLPPLVQCTRHMC 298
BLAST of FC920987 vs. ExPASy Swiss-Prot
Match: COBL3_ORYSJ (COBRA-like protein 3 OS=Oryza sativa subsp. japonica GN=BC1L4 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.033e-24 Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 1 Query: 1 QAMMTWNVTCTYSQFLAQKTPTCCVSLSSFNNETTVSCPTCACGCQNNGTESGSCIKNALPEINNS 198 QA+MTWNVTCTYSQFLAQKTP+CCVSLSSF N+T V+CPTC+CGCQNNGT GSC+ P + ++ Sbjct: 211 QALMTWNVTCTYSQFLAQKTPSCCVSLSSFYNDTIVNCPTCSCGCQNNGTSPGSCVNENSPYLQSA 276
BLAST of FC920987 vs. ExPASy Swiss-Prot
Match: COBL4_ORYSJ (COBRA-like protein 4 OS=Oryza sativa subsp. japonica GN=BC1L9 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.382e-21 Identity = 40/65 (61.54%), Postives = 52/65 (80.00%), Query Frame = 1 Query: 1 QAMMTWNVTCTYSQFLAQKTPTCCVSLSSFNNETTVSCPTCACGCQNNGTESGSCIKNALPEINN 195 Q +MTWNV CTYSQFLAQK P+CCVSLSSF+N+ TV CPTC+CGC+N + +G C+K P++ + Sbjct: 204 QVLMTWNVICTYSQFLAQKVPSCCVSLSSFDNDKTVDCPTCSCGCRNEKSTTGKCVKKNAPDLQS 268
BLAST of FC920987 vs. ExPASy Swiss-Prot
Match: COBL1_ARATH (COBRA-like protein 1 OS=Arabidopsis thaliana GN=COBL1 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.382e-21 Identity = 45/63 (71.43%), Postives = 53/63 (84.13%), Query Frame = 1 Query: 1 QAMMTWNVTCTYSQFLAQKTPTCCVSLSSFNNETTVSCPTCACGCQNNGTESGSCIKNALPEI 189 QA+MTWNVTCTYSQFLAQKTPTCCVSLSSF N+T VSCPTC+CGC+N ++ G+C+ P I Sbjct: 208 QALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNKTIVSCPTCSCGCRNT-SQPGNCVDPKGPRI 269
BLAST of FC920987 vs. ExPASy Swiss-Prot
Match: COBL1_ORYSJ (COBRA-like protein 1 OS=Oryza sativa subsp. japonica GN=BC1L6 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.307e-21 Identity = 44/73 (60.27%), Postives = 58/73 (79.45%), Query Frame = 1 Query: 1 QAMMTWNVTCTYSQFLAQKTPTCCVSLSSFNNETTVSCPTCACGCQNNGTESGSCIKNALPEINNSSSTGSRD 219 QA MTWNVTCTYSQ +AQ++PTCCVSLSSF N+T V+CPTC+CGCQNN + GSC++ P + + +T ++D Sbjct: 203 QAHMTWNVTCTYSQIVAQRSPTCCVSLSSFYNDTIVNCPTCSCGCQNN--KPGSCVEGNSPYLASVVNTHNKD 273
BLAST of FC920987 vs. ExPASy Swiss-Prot
Match: COBL2_ARATH (COBRA-like protein 2 OS=Arabidopsis thaliana GN=COBL2 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 4.493e-20 Identity = 39/56 (69.64%), Postives = 52/56 (92.86%), Query Frame = 1 Query: 1 QAMMTWNVTCTYSQFLAQKTPTCCVSLSSFNNETTVSCPTCACGCQNNGTESGSCI 168 Q+++TWN+TCTYSQFLA+KTPTCCVSLS+F NET V CPTC+CGCQN+ +++G+C+ Sbjct: 203 QSLLTWNITCTYSQFLARKTPTCCVSLSAFYNETIVPCPTCSCGCQNS-SQAGTCV 257
BLAST of FC920987 vs. ExPASy Swiss-Prot
Match: COBL2_ORYSJ (COBRA-like protein 2 OS=Oryza sativa subsp. japonica GN=BC1L2 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.001e-19 Identity = 47/81 (58.02%), Postives = 55/81 (67.90%), Query Frame = 1 Query: 1 QAMMTWNVTCTYSQFLAQKTPTCCVSLSSFNNETTVSCPTCACGCQNNGTESGSCIKNALP---EINNSSSTGSRD*AVCC 234 QA +TWNVTCTYSQF+AQ+ PTCCVSLSSF NET V+CP CACGCQN + GSC++ P + N GS V C Sbjct: 205 QAHVTWNVTCTYSQFVAQRAPTCCVSLSSFYNETIVNCPKCACGCQNK--KPGSCVEGNSPYLASVVNGPGKGSLTPLVQC 283
BLAST of FC920987 vs. ExPASy Swiss-Prot
Match: COBL4_ARATH (COBRA-like protein 4 OS=Arabidopsis thaliana GN=COBL4 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 2.726e-17 Identity = 38/57 (66.67%), Postives = 45/57 (78.95%), Query Frame = 1 Query: 1 QAMMTWNVTCTYSQFLAQKTPTCCVSLSSFNNETTVSCPTCACGCQNNGTESGSCIK 171 QA+MTWNVTCTYSQFLA+K P+CCVS SSF N+T CP+CACGC+N SC+K Sbjct: 195 QALMTWNVTCTYSQFLARKHPSCCVSFSSFYNDTITPCPSCACGCEN----KKSCVK 247
BLAST of FC920987 vs. ExPASy Swiss-Prot
Match: COBL6_ORYSJ (COBRA-like protein 6 OS=Oryza sativa subsp. japonica GN=BC1L7 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.821e-14 Identity = 33/45 (73.33%), Postives = 36/45 (80.00%), Query Frame = 1 Query: 1 QAMMTWNVTCTYSQFLAQKTPTCCVSLSSFNNETTVSCPTCACGC 135 QA+MTWNVTCTYSQ LA K P+CCVS SSF N+T V C CACGC Sbjct: 196 QALMTWNVTCTYSQHLASKYPSCCVSFSSFYNDTIVPCAKCACGC 240
BLAST of FC920987 vs. ExPASy Swiss-Prot
Match: COBL5_ORYSJ (COBRA-like protein 5 OS=Oryza sativa subsp. japonica GN=BC1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.821e-14 Identity = 45/96 (46.88%), Postives = 50/96 (52.08%), Query Frame = 1 Query: 1 QAMMTWNVTCTYSQFLAQKTPTCCVSLSSFNNETTVSCPTCACGCQNNGTE-SGSCIKNALP----EINNSSSTGSRD*AVCCXXXXXXRYQCAGV 273 QA+MTW VTCTYSQ LA + PTCCVS SSF N T V C CACGC ++G +G KNA NS G C R AGV Sbjct: 197 QALMTWTVTCTYSQQLASRYPTCCVSFSSFYNSTIVPCARCACGCGHDGYRGNGGGGKNARAGDGRSRRNSGGGGGHSGGTECIMGDSKRALSAGV 292 The following BLAST results are available for this feature:
BLAST of FC920987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920987 ID=FC920987; Name=FC920987; organism=Citrus clementina; type=EST; length=613bpback to top |