FC921002

Overview
NameFC921002
Unique NameFC921002
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length682
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14227 contig Ccv1_Contig14227:1..682. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921002 vs. ExPASy Swiss-Prot
Match: ATG8I_ARATH (Autophagy-related protein 8i OS=Arabidopsis thaliana GN=ATG8I PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.266e-48
Identity = 91/115 (79.13%), Postives = 106/115 (92.17%), Query Frame = 2
Query:   74 MQSFKDEFTFGQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 418
            M+SFK+++T  +RL ESREIIAKYP R+PVIAE+Y K DLP +EKKKFLVPRDMSVGQFI+ILS+RLHL+PGKALFVFV +TLPQTA LMDSVYES+KD+DGF+YMCYSSEKTFG
Sbjct:    1 MKSFKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIYILSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115          
BLAST of FC921002 vs. ExPASy Swiss-Prot
Match: ATG8H_ARATH (Autophagy-related protein 8h OS=Arabidopsis thaliana GN=ATG8H PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.506e-44
Identity = 82/115 (71.30%), Postives = 100/115 (86.96%), Query Frame = 2
Query:   74 MQSFKDEFTFGQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 418
            ++SFKD+F+  +RL+ES  IIAKYPDR+PVI E+YS ADLPDMEK K+LVPRDM+VG FIH+LS R+ L P KALFVFV +TLPQTA+ MDS+Y +FK+EDGFLYMCYS+EKTFG
Sbjct:    5 VKSFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIHMLSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119          
BLAST of FC921002 vs. ExPASy Swiss-Prot
Match: ATG8D_ORYSJ (Autophagy-related protein 8D OS=Oryza sativa subsp. japonica GN=ATG8D PE=3 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 2.828e-40
Identity = 80/117 (68.38%), Postives = 99/117 (84.62%), Query Frame = 2
Query:   71 KMQSFKDEFTFGQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDE-DGFLYMCYSSEKTFG 418
            K + FK+EFT  +R +ES  +IA YPDR+PVI E++S+++LP+MEK+K+LVP +M VGQFI IL SRLHL+PG ALFVFV +TLPQTA LM SVYES+KDE DGFLY+CYSSEKTFG
Sbjct:    2 KPRPFKEEFTLEERAKESAAMIASYPDRIPVIVEKFSRSNLPEMEKRKYLVPCNMPVGQFIFILRSRLHLSPGTALFVFVNNTLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTFG 118          
BLAST of FC921002 vs. ExPASy Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.662e-32
Identity = 62/115 (53.91%), Postives = 86/115 (74.78%), Query Frame = 2
Query:   74 MQSFKDEFTFGQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 418
            + SFK E    +R  E+  I  KYPDR+PVI ER  K+D+PD+++KK+LVP D++VGQF++++  R+ L+P KA+F+FVK+ LP TA +M ++YE  KDEDGFLYM YS E TFG
Sbjct:    3 ISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117          
BLAST of FC921002 vs. ExPASy Swiss-Prot
Match: ATG8_PHYIN (Autophagy-related protein 8 OS=Phytophthora infestans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.701e-32
Identity = 60/115 (52.17%), Postives = 87/115 (75.65%), Query Frame = 2
Query:   74 MQSFKDEFTFGQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 418
            M SFK E  F +R  E++ I +KYPDR+PVI E+  ++D+PD++KKK+LVP D++VGQF++++  R+ L+P KA+F+F+ + LP TA LM ++YE  KD DGFLY+ YS E TFG
Sbjct:    1 MSSFKKEHPFEKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 115          
BLAST of FC921002 vs. ExPASy Swiss-Prot
Match: ATG8_CANGA (Autophagy-related protein 8 OS=Candida glabrata GN=ATG8 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.701e-32
Identity = 60/115 (52.17%), Postives = 87/115 (75.65%), Query Frame = 2
Query:   80 SFKDEFTFGQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFGYE 424
            SFK E+ F +R  ES  I  K+ +R+PVI E+  K+D+P+++K+K+LVP D++VGQF++++  R+ L P KA+F+FV DTLP TA+LM  VY+  KD+DGFLY+ YS E TFGY+
Sbjct:    4 SFKSEYPFEKRKAESERISEKFQNRIPVICEKAEKSDIPEVDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTASLMSQVYQEHKDKDGFLYVTYSGENTFGYQ 118          
BLAST of FC921002 vs. ExPASy Swiss-Prot
Match: ATG8_KLULA (Autophagy-related protein 8 OS=Kluyveromyces lactis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.834e-32
Identity = 61/113 (53.98%), Postives = 86/113 (76.11%), Query Frame = 2
Query:   80 SFKDEFTFGQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 418
            +FK EF F +R  ES  I+ K+ +R+PVI ER  K+D+PD++K+K+LVP D++VGQF++++  R+ L   KA+F+FV DTLP TA LM S+Y+  KD+DGFLY+ YSSE TFG
Sbjct:    4 AFKSEFPFEKRKAESERIVQKFHNRIPVICERGGKSDIPDIDKRKYLVPGDLTVGQFVYVIRKRIKLPAEKAIFIFVNDTLPPTAALMSSIYQQHKDKDGFLYVSYSSENTFG 116          
BLAST of FC921002 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica GN=ATG8B PE=3 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.834e-32
Identity = 62/113 (54.87%), Postives = 86/113 (76.11%), Query Frame = 2
Query:   80 SFKDEFTFGQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 418
            SFK + T  +R  E+  I  KY DR+PVI E+  ++D+PD++KKK+LVP D++VGQF++++  R+ L+P KA+F+FVK+TLP TA LM ++YE  KDEDGFLYM YS E TFG
Sbjct:    5 SFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of FC921002 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.834e-32
Identity = 62/113 (54.87%), Postives = 86/113 (76.11%), Query Frame = 2
Query:   80 SFKDEFTFGQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 418
            SFK + T  +R  E+  I  KY DR+PVI E+  ++D+PD++KKK+LVP D++VGQF++++  R+ L+P KA+F+FVK+TLP TA LM ++YE  KDEDGFLYM YS E TFG
Sbjct:    5 SFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of FC921002 vs. ExPASy Swiss-Prot
Match: ATG8_MAGGR (Autophagy-related protein 8 OS=Magnaporthe grisea GN=ATG8 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.314e-32
Identity = 62/112 (55.36%), Postives = 84/112 (75.00%), Query Frame = 2
Query:   83 FKDEFTFGQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 418
            FKDE  F +R  E+  I  KY DR+PVI E+  K+D+  ++KKK+LVP D++VGQF++++  R+ L+P KA+F+FV+DTLP TA LM S+YE  KDEDGFLY+ YS E TFG
Sbjct:    5 FKDEHPFEKRKAEAERIRQKYTDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVQDTLPPTAALMSSIYELHKDEDGFLYITYSGENTFG 116          
The following BLAST results are available for this feature:
BLAST of FC921002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
ATG8I_ARATH1.266e-4879.13Autophagy-related protein 8i OS=Arabidopsis thalia... [more]
ATG8H_ARATH5.506e-4471.30Autophagy-related protein 8h OS=Arabidopsis thalia... [more]
ATG8D_ORYSJ2.828e-4068.38Autophagy-related protein 8D OS=Oryza sativa subsp... [more]
ATG8D_ARATH1.662e-3253.91Autophagy-related protein 8d OS=Arabidopsis thalia... [more]
ATG8_PHYIN3.701e-3252.17Autophagy-related protein 8 OS=Phytophthora infest... [more]
ATG8_CANGA3.701e-3252.17Autophagy-related protein 8 OS=Candida glabrata GN... [more]
ATG8_KLULA4.834e-3253.98Autophagy-related protein 8 OS=Kluyveromyces lacti... [more]
ATG8B_ORYSJ4.834e-3254.87Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8B_ORYSI4.834e-3254.87Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8_MAGGR6.314e-3255.36Autophagy-related protein 8 OS=Magnaporthe grisea ... [more]

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Properties
Property NameValue
Genbank descriptionC32201H06EF RVDevelopN Citrus clementina cDNA clone C32201H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921002 ID=FC921002; Name=FC921002; organism=Citrus clementina; type=EST; length=682bp
GAGAGTTGACGGGTAGTTCAGCCGTTTGGGTTTCTCTTTCCTTGAGAGTT
GAGACGATACGGAGATGGGAAAGATGCAATCTTTCAAGGACGAGTTCACA
TTCGGGCAAAGACTTGAAGAATCGCGCGAAATCATTGCGAAATACCCCGA
TCGAGTCCCCGTAATTGCGGAAAGATATTCAAAAGCTGACCTTCCTGATA
TGGAAAAGAAAAAATTTCTGGTTCCTCGGGACATGTCTGTTGGGCAATTT
ATTCACATTTTAAGCAGCAGGCTTCACCTGACCCCTGGAAAAGCTCTCTT
TGTATTTGTGAAAGATACTTTACCGCAAACAGCGACTTTAATGGACTCAG
TCTATGAATCCTTCAAGGATGAGGATGGATTCCTGTATATGTGCTACAGC
AGTGAGAAAACCTTTGGTTATGAAAGAATTCAGACTTGTTAATACTTGAA
CTTTGTTCATGGCTGTGTGCTACTGTGCTTTACATGCCACTCCTTGTTGT
GAAATGATGTATATAACTCAGCATGGCCATTGATGTTGTATTATCTGTCT
TAGTTTATTCTGCAGATTGTTTAAACATCAGAAATGTCTCGTGTGTGGAT
ATAACTTGCGTGTGGATATAACTTATGATTCCATCAACCTGCTTTGACGT
TTCATATGCAAAAAAAAAAAAAAAAAAAAAAA
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