FC921067

Overview
NameFC921067
Unique NameFC921067
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length676
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13251 contig Ccv1_Contig13251:693..1371. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921067 vs. ExPASy Swiss-Prot
Match: BCS1_SCHPO (Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe GN=SPAC644.07 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.008e-27
Identity = 73/203 (35.96%), Postives = 116/203 (57.14%), Query Frame = 2
Query:   59 HPAN---FDTLAMDFDMKKTIMDDLERFLQRKEFYRRVGKAWKRGYLLFGPPGTGKSSLIAAMANYLKFDIYDLELSNLRGNND-LRHILIATENKSILVVEDIDCCIDRQDRLSRARATNPGVLIPGSEQQQNQYVITLSGLLNFIDGLWSSCGDERIIIFTTNHKDRLDPAL-RPGRMDVHIHMSYCTPCGFKMLASNYLG 652
            HP +     ++ ++ ++KK I DD+  FL+  ++Y   G  ++RGYLL+GPPG+GK+S + A+A  L +DI  L L+     +D L H+L     K+++++ED+D     ++R               S +      +T SGLLN +DG+ SS  DERII  TTNH ++LDPAL RPGR+DV  ++   TP   + + + + G
Sbjct:  200 HPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICVLNLAEKGLTDDRLNHLLSNVPPKAVVLLEDVDSAFQGRER---------------SGEVGFHANVTFSGLLNALDGVTSS--DERIIFMTTNHPEKLDPALVRPGRVDVKAYLGNATPEQVREMFTRFYG 385          
BLAST of FC921067 vs. ExPASy Swiss-Prot
Match: BCS1_XENLA (Mitochondrial chaperone BCS1 OS=Xenopus laevis GN=bcs1l PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.524e-25
Identity = 68/181 (37.57%), Postives = 110/181 (60.77%), Query Frame = 2
Query:   77 TLAMDFDMKKTIMDDLERFLQRKEFYRRVGKAWKRGYLLFGPPGTGKSSLIAAMANYLKFDIYDLELSNLRGNND-LRHILIATENKSILVVEDIDCCIDRQDRLSRARATNPGVLIPGSEQQQNQYVITLSGLLNFIDGLWSSCGDERIIIFTTNHKDRLDPAL-RPGRMDVHIHMSYCT 613
            ++ ++  + + I+ D++ F++  ++Y   G  ++RGYLL+GPPG GKSS I A+A  L++ I  + LS+   ++D L H+L     +SI+++ED+D     +D L++   T            Q    +T SGLLN +DG+ S+  + RI+  TTNH DRLDPAL RPGR+DV  ++ +CT
Sbjct:  190 SVVLEQGISEKIVQDVKGFIENPKWYSDRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSICLMSLSDSSLSDDRLNHLLSVAPQQSIILLEDVDAAFVSRD-LNKQNPT----------AYQGMGRLTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDVKQYVGHCT 357          
BLAST of FC921067 vs. ExPASy Swiss-Prot
Match: BCS1B_DICDI (Probable mitochondrial chaperone BCS1-B OS=Dictyostelium discoideum GN=bcsl1b PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.306e-25
Identity = 75/219 (34.25%), Postives = 115/219 (52.51%), Query Frame = 2
Query:   23 GDKSIWQSVNLD-----HPAN---FDTLAMDFDMKKTIMDDLERFLQRKEFYRRVGKAWKRGYLLFGPPGTGKSSLIAAMANYLKFDIYDLELSNLR-GNNDLRHILIATENKSILVVEDIDCCID--RQDRLSRARATNPGVLIPGSEQQQNQY----------VITLSGLLNFIDGLWSSCGDERIIIFTTNHKDRLDPAL-RPGRMDVHIHMSYCT 613
            G   I+ S+  D     HP       ++ +D    + I+ D+++FL   ++Y   G  ++RGYLL+GPPGTGKSS I A+A  L+  I  L L+     +  L  +L     +SI+++EDID  I     D  +++ + N   +  G  Q Q  Y           +T SGLLN +DG+ +S G  RI+  TTNH ++LD  L RPGR+D+ I +  C+
Sbjct:  182 GKTLIYTSMGTDWRRFGHPRRKRPISSVILDKGKSELIIQDVKKFLNNSDWYNDRGIPYRRGYLLYGPPGTGKSSFITALAGELQLSICILNLAGKSVSDTSLNQLLATAPQRSIILLEDIDSAIQTGNHDLSAKSNSANAPSISSGGLQYQGYYGNPSVSSGGSALTFSGLLNALDGVAASEG--RILFMTTNHLEKLDKVLIRPGRVDLQIEIGLCS 398          
BLAST of FC921067 vs. ExPASy Swiss-Prot
Match: BCS1_HUMAN (Mitochondrial chaperone BCS1 OS=Homo sapiens GN=BCS1L PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.760e-24
Identity = 68/170 (40.00%), Postives = 102/170 (60.00%), Query Frame = 2
Query:  110 IMDDLERFLQRKEFYRRVGKAWKRGYLLFGPPGTGKSSLIAAMANYLKFDIYDLELSNLRGNND-LRHILIATENKSILVVEDIDCCIDRQDRLSRARATNPGVLIPGSEQQQNQYVITLSGLLNFIDGLWSSCGDERIIIFTTNHKDRLDPAL-RPGRMDVHIHMSYCT 613
            I+ D++ F+   ++Y   G  ++RGYLL+GPPG GKSS I A+A  L+  I  L L++   ++D L H+L     +S++++ED+D        LSR  A    V   G  +      +T SGLLN +DG+ S+  + RI+  TTNH DRLDPAL RPGR+D+  ++ YC+
Sbjct:  201 IVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAF-----LSRDLAVENPVKYQGLGR------LTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCS 357          
BLAST of FC921067 vs. ExPASy Swiss-Prot
Match: BCS1_YEAST (Mitochondrial chaperone BCS1 OS=Saccharomyces cerevisiae GN=BCS1 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.061e-23
Identity = 70/198 (35.35%), Postives = 112/198 (56.57%), Query Frame = 2
Query:   77 TLAMDFDMKKTIMDDLERFLQRKEFYRRVGKAWKRGYLLFGPPGTGKSSLIAAMANYLKFDIYDLELSNLRGNND-LRHILIATENKSILVVEDIDCCIDRQDRLSRARATNPGVLIPGSEQQQNQYVITLSGLLNFIDGLWSSCGDERIIIFTTNHKDRLDPA-LRPGRMDVHIHMSYCTPCGF-KMLASNYLGITE 661
            ++ +D  +K+ I+DD+  F++  ++Y   G  ++RGYLL+GPPG+GK+S I A+A  L ++I  L LS     +D L H++     +SIL++EDID   +++ +               + +Q     +T SGLLN +DG+ SS  +E I   TTNH ++LD A +RPGR+D  + +   TP    KM    Y G T+
Sbjct:  227 SVILDSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNICILNLSENNLTDDRLNHLMNNMPERSILLLEDIDAAFNKRSQ---------------TGEQGFHSSVTFSGLLNALDGVTSS--EETITFMTTNHPEKLDAAIMRPGRIDYKVFVGNATPYQVEKMFMKFYPGETD 407          
BLAST of FC921067 vs. ExPASy Swiss-Prot
Match: BCS1_MOUSE (Mitochondrial chaperone BCS1 OS=Mus musculus GN=Bcs1l PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.809e-23
Identity = 67/182 (36.81%), Postives = 106/182 (58.24%), Query Frame = 2
Query:   74 DTLAMDFDMKKTIMDDLERFLQRKEFYRRVGKAWKRGYLLFGPPGTGKSSLIAAMANYLKFDIYDLELSNLRGNND-LRHILIATENKSILVVEDIDCCIDRQDRLSRARATNPGVLIPGSEQQQNQYVITLSGLLNFIDGLWSSCGDERIIIFTTNHKDRLDPAL-RPGRMDVHIHMSYCT 613
            D++ +   +   I+ D+  F+   ++Y   G  ++RGYLL+GPPG GKSS I A+A  L+  I  L L++   ++D L H+L     +S++++ED+D        LSR  A    +   G  +      +T SGLLN +DG+ S+  + RI+  TTN+ DRLDPAL RPGR+D+  ++ YC+
Sbjct:  189 DSVVLQQGLADRIVKDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAF-----LSRDLAVENPIKYQGLGR------LTFSGLLNALDGVAST--EARIVFMTTNYIDRLDPALIRPGRVDLKEYVGYCS 357          
BLAST of FC921067 vs. ExPASy Swiss-Prot
Match: BCS1_BOVIN (Mitochondrial chaperone BCS1 OS=Bos taurus GN=BCS1L PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.086e-23
Identity = 66/182 (36.26%), Postives = 108/182 (59.34%), Query Frame = 2
Query:   74 DTLAMDFDMKKTIMDDLERFLQRKEFYRRVGKAWKRGYLLFGPPGTGKSSLIAAMANYLKFDIYDLELSNLRGNND-LRHILIATENKSILVVEDIDCCIDRQDRLSRARATNPGVLIPGSEQQQNQYVITLSGLLNFIDGLWSSCGDERIIIFTTNHKDRLDPAL-RPGRMDVHIHMSYCT 613
            +++ ++  + + I+ D+  F+   ++Y   G  ++RGYLL+GPPG GKSS I A+A  L+  I  L L++   ++D L H+L     +S++++ED+D        LSR  A    +   G  +      +T SGLLN +DG+ S+  + RI+  TTNH DRLDPAL RPGR+D+  ++ +C+
Sbjct:  189 NSVVLEQGVTERIVRDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAF-----LSRDLAAENPIKYQGLGR------LTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDMKEYVGHCS 357          
BLAST of FC921067 vs. ExPASy Swiss-Prot
Match: BCS1_DANRE (Mitochondrial chaperone BCS1 OS=Danio rerio GN=bcs1l PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.030e-23
Identity = 66/181 (36.46%), Postives = 107/181 (59.12%), Query Frame = 2
Query:   77 TLAMDFDMKKTIMDDLERFLQRKEFYRRVGKAWKRGYLLFGPPGTGKSSLIAAMANYLKFDIYDLELSNLRGNND-LRHILIATENKSILVVEDIDCCIDRQDRLSRARATNPGVLIPGSEQQQNQYVITLSGLLNFIDGLWSSCGDERIIIFTTNHKDRLDPAL-RPGRMDVHIHMSYCT 613
            ++ ++  + + I+DD++ F+   ++Y   G  ++RGYLL+GPPG GKSS I A+A  L + I  + LS+   ++D L H+L     +SI+++ED+D     ++ L      NP          Q    +T SGLLN +DG+ SS  + RI+  TTN  +RLDPAL RPGR+D+  ++ +C+
Sbjct:  190 SVVLESGVAERIVDDVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGYSICLMSLSDRSLSDDRLNHLLSVAPQQSIILLEDVDAAFVSRELLP---TENP-------LAYQGMGRLTFSGLLNALDGVASS--EARIVFMTTNFIERLDPALVRPGRVDLKQYVGHCS 358          
BLAST of FC921067 vs. ExPASy Swiss-Prot
Match: BCS1A_DICDI (Probable mitochondrial chaperone BCS1-A OS=Dictyostelium discoideum GN=bcs1la PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.772e-21
Identity = 67/190 (35.26%), Postives = 102/190 (53.68%), Query Frame = 2
Query:   95 DMKKTIMDDLERFLQRKEFYRRVGKAWKRGYLLFGPPGTGKSSLIAAMANYLKFDIYDLELSNLR-GNNDLRHILIATENKSILVVEDIDCCI-DRQDRLSRARATNPGVLIPGSEQQQNQYVITLSGLLNFIDGLWSSCGDERIIIFTTNHKDRLDPAL-RPGRMDVHIHMSYCTPCGFKMLASNYLGI 655
            D+K  +++D++ F+  + +YR  G  ++RGYLL+G PG GKSSLI A+A  L  DI  + LS+    +  + H+L     KSIL++EDID      +D +              +    N   +T SGLLN +DG+ S  G  RI+  TTN  + LD AL R GR+D+ I +S  T      L +++  +
Sbjct:  194 DLKSKLIEDIKSFITNESWYRNRGIPYRRGYLLYGEPGNGKSSLINAIAGELNLDICIVSLSSKDIDDKQINHLLNNAPPKSILLIEDIDAAFKSHRDNVD-----------SNNNNSNNNNSLTYSGLLNALDGVASQEG--RILFMTTNKIELLDSALIREGRIDLKIKVSNATKSQAAQLFTHFYNL 370          
BLAST of FC921067 vs. ExPASy Swiss-Prot
Match: YL572_MIMIV (Putative AAA family ATPase L572 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L572 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.618e-14
Identity = 53/157 (33.76%), Postives = 86/157 (54.78%), Query Frame = 2
Query:  224 LIAAMANYLKFDIYDLELSNLRGNNDLRHILIATENK-SILVVEDIDCCIDRQDRLSRARATNPGVLIPGSEQQQNQYV------------ITLSGLLNFIDGLWSSCGDERIIIFTTNHKDRLDPAL-RPGRMDVHIHMSYCTPCGFKMLASNYLG 652
            +I A++ + K  I+ L L+N++ +N+L ++L A   K +ILV+EDIDC  +     ++   T    +       +N+ +            +TLSG+LN +DG+++S G  RI+I TTNH + LDPAL R GR+D+ I  S C       +  N+ G
Sbjct:    1 MIKAISTHTKRHIHYLILNNIQDDNELINLLNAVNCKETILVLEDIDCASEAVKSRAKEEETVVEKVTDDKSTLENKILADQLKKVEKVSKLTLSGILNSLDGIFNSEG--RIVIMTTNHSEVLDPALIRRGRIDMQIEFSNCDRYQIAKMYENFYG 155          
The following BLAST results are available for this feature:
BLAST of FC921067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
BCS1_SCHPO6.008e-2735.96Probable mitochondrial chaperone bcs1 OS=Schizosac... [more]
BCS1_XENLA2.524e-2537.57Mitochondrial chaperone BCS1 OS=Xenopus laevis GN=... [more]
BCS1B_DICDI4.306e-2534.25Probable mitochondrial chaperone BCS1-B OS=Dictyos... [more]
BCS1_HUMAN4.760e-2440.00Mitochondrial chaperone BCS1 OS=Homo sapiens GN=BC... [more]
BCS1_YEAST1.061e-2335.35Mitochondrial chaperone BCS1 OS=Saccharomyces cere... [more]
BCS1_MOUSE1.809e-2336.81Mitochondrial chaperone BCS1 OS=Mus musculus GN=Bc... [more]
BCS1_BOVIN3.086e-2336.26Mitochondrial chaperone BCS1 OS=Bos taurus GN=BCS1... [more]
BCS1_DANRE4.030e-2336.46Mitochondrial chaperone BCS1 OS=Danio rerio GN=bcs... [more]
BCS1A_DICDI3.772e-2135.26Probable mitochondrial chaperone BCS1-A OS=Dictyos... [more]
YL572_MIMIV7.618e-1433.76Putative AAA family ATPase L572 OS=Acanthamoeba po... [more]
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Properties
Property NameValue
Genbank descriptionC32202G02EF RVDevelopN Citrus clementina cDNA clone C32202G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921067 ID=FC921067; Name=FC921067; organism=Citrus clementina; type=EST; length=676bp
GGGGTCTCACAGAGGAATGATTGGTGATAAATCAATATGGCAATCAGTGA
ATCTTGATCATCCGGCAAATTTTGATACATTGGCTATGGATTTTGATATG
AAGAAGACGATAATGGATGATCTAGAGAGGTTTCTGCAGAGGAAGGAATT
TTATCGAAGAGTAGGCAAGGCATGGAAACGAGGGTATTTACTGTTTGGTC
CTCCAGGGACTGGCAAGTCAAGCTTGATCGCGGCCATGGCTAATTATCTC
AAATTTGATATCTATGACTTGGAGTTATCTAATCTTCGGGGAAATAATGA
TTTAAGGCATATACTGATTGCCACAGAGAACAAGTCCATTCTGGTTGTGG
AGGACATTGATTGTTGCATTGACCGGCAGGACAGGCTTTCGCGGGCAAGG
GCTACAAATCCTGGTGTTCTCATACCAGGATCTGAACAACAACAAAATCA
GTATGTTATAACCTTATCAGGATTGTTAAACTTCATTGATGGATTGTGGT
CAAGCTGTGGAGATGAGCGGATCATAATATTCACAACCAATCATAAAGAC
AGGCTTGACCCTGCTTTGCGCCCCGGTCGTATGGATGTGCATATCCACAT
GTCATACTGCACTCCATGTGGGTTCAAAATGCTGGCCTCCAACTACCTTG
GGATCACAGAGCATCCACTTTTTGTG
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