FC921164
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921164 vs. ExPASy Swiss-Prot
Match: T184A_MOUSE (Transmembrane protein 184A OS=Mus musculus GN=Tmem184a PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.745e-14 Identity = 47/155 (30.32%), Postives = 78/155 (50.32%), Query Frame = 1 Query: 142 SGLCVMLTMNFTMRLLQQHLFYWKNPKEQKAXXXXXLMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECYEALVIAKFMALMYSYLKISISKNIVPDEIKGREFHHSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMITLQLLRIY 606 SG+ V + T + HL + P+EQ+ + PIYA DS++ LL + G P++ + DSV++CYEA VI F+ L + YL ++ + EI+G+ S R + L+ K T QF +++P+ +++ I LQ Y Sbjct: 62 SGVFVWTALLLTGHQIYSHLRSYTAPREQRFVIRLLFIVPIYAFDSWLSLL-LLGGHPYYVYFDSVRDCYEAFVIYSFLTLCFQYLG---GESAIMAEIRGKPIRSSCFYGTCCLRGMSYSITFLRFCKQATLQFCIVKPVMALITIILQAFDKY 212
BLAST of FC921164 vs. ExPASy Swiss-Prot
Match: T184A_RAT (Transmembrane protein 184A OS=Rattus norvegicus GN=Tmem184a PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14 Identity = 47/155 (30.32%), Postives = 78/155 (50.32%), Query Frame = 1 Query: 142 SGLCVMLTMNFTMRLLQQHLFYWKNPKEQKAXXXXXLMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECYEALVIAKFMALMYSYLKISISKNIVPDEIKGREFHHSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMITLQLLRIY 606 SG+ V + T + HL + P+EQ+ + PIYA DS++ LL + G P++ + DSV++CYEA VI F+ L + YL ++ + EI+G+ S R + L+ K T QF +++P+ +++ I LQ Y Sbjct: 62 SGVFVWTALLLTGHQIYSHLRSYTVPREQRFVIRLLFIVPIYAFDSWLSLL-LLGGHPYYVYFDSVRDCYEAFVIYSFLTLCFQYLG---GESAIMAEIRGKPIRSSCFYGTCCLRGMSYSITFLRFCKQATLQFCIVKPVMALITIILQAFDKY 212
BLAST of FC921164 vs. ExPASy Swiss-Prot
Match: T184C_MOUSE (Transmembrane protein 184C OS=Mus musculus GN=Tmem184c PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13 Identity = 50/171 (29.24%), Postives = 87/171 (50.88%), Query Frame = 1 Query: 142 SGLCVMLTMNFTMRLLQQHLFYWKNPKEQKAXXXXXLMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECYEALVIAKFMALMYSYLKISISKNIVPDEIKGREFHHSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMITLQLLRIYPSW-----LSWTFTII 639 +G+ ++LT+ ++ + QHL ++ P+ QK M PIY+VDS+V L+ K ++D+ +ECYEA VI FM + +YL I I+ E K ++ +H P+ P + L K Q+ V+RPI ++ + ++L +Y +WT+ +I Sbjct: 52 AGIFLLLTIPVSLWGILQHLVHYTQPELQKPIIRILWMVPIYSVDSWVALVYPK----IAIYVDTWRECYEAYVIYNFMIFLTNYLTIRFPNLILHLEAKDQQ-NHILPLCCCPPWA--MGEMLLFRCKLGVLQYTVVRPITTVTALVCEILDVYDEGNFGFSNAWTYLVI 215
BLAST of FC921164 vs. ExPASy Swiss-Prot
Match: T184A_HUMAN (Transmembrane protein 184A OS=Homo sapiens GN=TMEM184A PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13 Identity = 47/155 (30.32%), Postives = 77/155 (49.68%), Query Frame = 1 Query: 142 SGLCVMLTMNFTMRLLQQHLFYWKNPKEQKAXXXXXLMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECYEALVIAKFMALMYSYLKISISKNIVPDEIKGREFHHSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMITLQLLRIY 606 SG+ V + T + HL + P+EQ+ L+ PIYA DS++ LL + G ++ + DSV++CYEA VI F++L + YL + + EI+G+ S R + L+ K T QF +++P+ ++ I LQ Y Sbjct: 59 SGIFVWTALVLTCHQIYLHLRSYTVPQEQRYIIRLLLIVPIYAFDSWLSLL-LLGDHQYYVYFDSVRDCYEAFVIYSFLSLCFQYLG---GEGAIMAEIRGKPIKSSCLYGTCCLRGMTYSIGFLRFCKQATLQFCLVKPVMAVTTIILQAFGKY 209
BLAST of FC921164 vs. ExPASy Swiss-Prot
Match: T184C_BOVIN (Transmembrane protein 184C OS=Bos taurus GN=TMEM184C PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 48/171 (28.07%), Postives = 85/171 (49.71%), Query Frame = 1 Query: 142 SGLCVMLTMNFTMRLLQQHLFYWKNPKEQKAXXXXXLMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECYEALVIAKFMALMYSYLKISISKNIVPDEIKGREFHHSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMITLQLLRIYPSW-----LSWTFTII 639 +G+ ++LT+ ++ ++ QHL ++ P+ QK M PIY++DS++ L ++D+ +ECYEA VI FM + +YL ++ E K ++ H P+ P T + L K Q+ V+RP +I+ + +LL IY +WT+ +I Sbjct: 52 AGIFLLLTIPISLWVILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIAL----KYPSIAIYVDTCRECYEAYVIYNFMGFLTNYLTNRYPNLVLIIEAKDQQKHFP-PLCCCPPWT--MGEVLLFRCKLGVLQYTVVRPFTTIIALVCELLDIYDEGNFSFSNAWTYLVI 215
BLAST of FC921164 vs. ExPASy Swiss-Prot
Match: T184C_RAT (Transmembrane protein 184C OS=Rattus norvegicus GN=Tmem184c PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12 Identity = 49/171 (28.65%), Postives = 86/171 (50.29%), Query Frame = 1 Query: 142 SGLCVMLTMNFTMRLLQQHLFYWKNPKEQKAXXXXXLMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECYEALVIAKFMALMYSYLKISISKNIVPDEIKGREFHHSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMITLQLLRIYPSW-----LSWTFTII 639 +G+ ++LT+ +M + QHL ++ P+ QK M PIY++DS+V L K ++D+ +ECYEA VI FM + +YL I ++ E K ++ +H P+ P + L K Q+ V+RPI ++ + ++L +Y +WT+ +I Sbjct: 52 AGIFLLLTIPVSMCGILQHLVHYTQPELQKPIIRILWMVPIYSLDSWVALKYPK----IAIYVDTWRECYEAYVIYNFMIFLTNYLTIRFPNLMLHLEAKDQQ-NHLPPLCCCPPWA--MGEMLLFRCKLGVLQYTVVRPITTVTSLVCEILGVYDEGNFSFSNAWTYLVI 215
BLAST of FC921164 vs. ExPASy Swiss-Prot
Match: T184A_BOVIN (Transmembrane protein 184A OS=Bos taurus GN=TMEM184A PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11 Identity = 46/155 (29.68%), Postives = 76/155 (49.03%), Query Frame = 1 Query: 142 SGLCVMLTMNFTMRLLQQHLFYWKNPKEQKAXXXXXLMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECYEALVIAKFMALMYSYLKISISKNIVPDEIKGREFHHSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMITLQLLRIY 606 SG+ V + T + HL + P EQ+ + P+YA DS++ LL + G + + DSV++CYEA VI F++L + YL ++ + EI+G+ S R + L+ K T QF +++PI +++ I LQ Y Sbjct: 49 SGVFVWAALVLTGHQIYLHLRSYTVPHEQRYIIRLLFIVPVYAFDSWLSLL-LLGGHQHYIYFDSVRDCYEAFVIYSFLSLCFQYLG---GESAIMAEIRGKPVRTSCFHGTCCLRGMTYSIGFLRFCKQATLQFCIVKPIMALVTIVLQAFGKY 199
BLAST of FC921164 vs. ExPASy Swiss-Prot
Match: T184B_HUMAN (Transmembrane protein 184B OS=Homo sapiens GN=TMEM184B PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11 Identity = 45/157 (28.66%), Postives = 76/157 (48.41%), Query Frame = 1 Query: 142 SGLCVMLTMNFTMRLLQQHLFYWKNPKEQKAXXXXXLMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECYEALVIAKFMALMYSYLKISISKNIVPDEIKGREFHHS--FPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMITLQLLRIY 606 SG V + T + HL + P EQ+ + PIYA DS++ LL + ++ + +V++CYEALVI F++L Y YL ++ + EI+G+ S + +T + L+ K T QF V++P+ ++ + LQ Y Sbjct: 50 SGFFVWTALLITCHQIYMHLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQ-YYVYFGTVRDCYEALVIYNFLSLCYEYLG---GESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGF--LRFCKQATLQFCVVKPLMAVSTVVLQAFGKY 200
BLAST of FC921164 vs. ExPASy Swiss-Prot
Match: T184B_BOVIN (Transmembrane protein 184B OS=Bos taurus GN=TMEM184B PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11 Identity = 45/157 (28.66%), Postives = 76/157 (48.41%), Query Frame = 1 Query: 142 SGLCVMLTMNFTMRLLQQHLFYWKNPKEQKAXXXXXLMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECYEALVIAKFMALMYSYLKISISKNIVPDEIKGREFHHS--FPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMITLQLLRIY 606 SG V + T + HL + P EQ+ + PIYA DS++ LL + ++ + +V++CYEALVI F++L Y YL ++ + EI+G+ S + +T + L+ K T QF V++P+ ++ + LQ Y Sbjct: 50 SGFFVWTALLITCHQIYMHLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQ-YYVYFGTVRDCYEALVIYNFLSLCYEYLG---GESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGF--LRFCKQATLQFCVVKPLMAVSTVVLQAFGKY 200
BLAST of FC921164 vs. ExPASy Swiss-Prot
Match: T184C_PONAB (Transmembrane protein 184C OS=Pongo abelii GN=TMEM184C PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 48/171 (28.07%), Postives = 84/171 (49.12%), Query Frame = 1 Query: 142 SGLCVMLTMNFTMRLLQQHLFYWKNPKEQKAXXXXXLMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECYEALVIAKFMALMYSYLKISISKNIVPDEIKGREFHHSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMITLQLLRIYPSW-----LSWTFTII 639 +G+ ++LT+ ++ ++ QHL ++ P+ QK M PIY++DS++ L ++D+ +ECYEA VI FM + +YL ++ E K ++ H FP P + L K Q+ V+RP +I+ + +LL IY +WT+ +I Sbjct: 52 AGIFLLLTIPISLWVILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIAL----KYPGIAIYVDTCRECYEAYVIYNFMGFLTNYLTNRYPNLVLILEAKDQQKH--FPPLCCCPPWA-MGEVLLFRCKLGVLQYTVVRPFTTIVALICELLGIYDEGNFSFSNAWTYLVI 215 The following BLAST results are available for this feature:
BLAST of FC921164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921164 ID=FC921164; Name=FC921164; organism=Citrus clementina; type=EST; length=698bpback to top |