FC921166

Overview
NameFC921166
Unique NameFC921166
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921166 vs. ExPASy Swiss-Prot
Match: P2C05_ARATH (Probable protein phosphatase 2C 5 OS=Arabidopsis thaliana GN=At1g09160 PE=2 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 5.525e-92
Identity = 166/228 (72.81%), Postives = 189/228 (82.89%), Query Frame = 1
Query:    1 SGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDIDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALTSDMAAKSCRGLPAELAAKLVVREALRSRGLKDDTTCLVVDIIPSDHPVPAPTPRKKQNVLSSLIFGKKAHD-SMKTSNKLAAVGVVEELFEEGSAMLAERLGRDFPSNASSGLFRCAVCQVDQPPSDGLSVNSGPYFSPTSKPWEGPFLCANCRKKK 681
            SGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGD DVGEFIVPIPHVKQVKL +AGGRLIIASDGIWD L+SD+AAK+CRGL A+LAAKLVV+EALR++GLKDDTTC+VVDI+PS H   AP P KKQN  +S +  K   D + K  NKL+AVGVVEELFEEGSA+LA+RLG+D  SN  +GL +CAVCQ+D+ PS+ LS N G   S  SK WEGPFLC  C+KKK
Sbjct:  186 SGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLPDAGGRLIIASDGIWDILSSDVAAKACRGLSADLAAKLVVKEALRTKGLKDDTTCVVVDIVPSGHLSLAPAPMKKQNPFTSFLSRKNHMDTNNKNGNKLSAVGVVEELFEEGSAVLADRLGKDLLSNTETGLLKCAVCQIDESPSEDLSSNGGSIISSASKRWEGPFLCTICKKKK 413          
BLAST of FC921166 vs. ExPASy Swiss-Prot
Match: P2C03_ORYSJ (Probable protein phosphatase 2C 3 OS=Oryza sativa subsp. japonica GN=Os01g0513100 PE=2 SV=2)

HSP 1 Score: 328.561 bits (841), Expect = 1.965e-89
Identity = 166/230 (72.17%), Postives = 191/230 (83.04%), Query Frame = 1
Query:    1 SGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDIDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALTSDMAAKSCRGLPAELAAKLVVREALRSRGLKDDTTCLVVDIIPSDHPVPAPTPRKKQNVLSSLIFGKKAHD-SMKTSNKLAAVGVVEELFEEGSAMLAERLGRDFPS-NASSGLFRCAVCQVDQPPSDGLSVNSGPYF-SPTSKPWEGPFLCANCRKKK 681
            SGGEVGRL+V GG E+GPLRCWPGGLCLSRSIGDIDVGEFIVP+P+VKQVKLSNAGGRLIIASDGIWDAL+S+ AAK CRGLPAELAAK VV+EALR+RGLKDDTTC+VVD+IP D  +  P+P KK N L SLIF KK  D   K + +L+A G+VEELFEEGSAML+ERLG D      SS LF CA+CQVD  PS+G+SV++G  F S +SKPWEGPFLC++CR KK
Sbjct:  242 SGGEVGRLSVVGGAEIGPLRCWPGGLCLSRSIGDIDVGEFIVPVPYVKQVKLSNAGGRLIIASDGIWDALSSEAAAKCCRGLPAELAAKQVVKEALRTRGLKDDTTCIVVDMIPPDQTIRHPSPPKKINKLKSLIFRKKTKDHPNKLTKQLSAAGMVEELFEEGSAMLSERLGNDSSGRRTSSSLFTCAICQVDLEPSEGISVHAGSIFSSSSSKPWEGPFLCSDCRDKK 471          
BLAST of FC921166 vs. ExPASy Swiss-Prot
Match: P2C33_ORYSJ (Probable protein phosphatase 2C 33 OS=Oryza sativa subsp. japonica GN=Os03g0301700 PE=2 SV=1)

HSP 1 Score: 324.709 bits (831), Expect = 2.837e-88
Identity = 164/231 (71.00%), Postives = 191/231 (82.68%), Query Frame = 1
Query:    1 SGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDIDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALTSDMAAKSCRGLPAELAAKLVVREALRSRGLKDDTTCLVVDIIPSDH--PVPAPTPRKKQNVLSSLIFGKKAHDSM-KTSNKLAAVGVVEELFEEGSAMLAERLGRDFPSNASSGLFRCAVCQVDQPP-SDGLSVNSGPYFSPTSKPWEGPFLCANCRKKK 681
            SGGEV RLN+ GG EVGPLRCWPGGLCLSRSIGD DVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDAL+S+ AA++CRGLPAELAAKLVV++AL++ GLKDDTTC+VVDIIPSDH    P+ +P+K QN L SL+FG+++H S+ K  NK A+   VEELFEEGSAML ERLGR+FPS A+S   RCA+CQVDQ P  D ++ N G   S  S PW GP+LC++CRKKK
Sbjct:  187 SGGEVSRLNLCGGQEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSEAAAQACRGLPAELAAKLVVKQALKTSGLKDDTTCVVVDIIPSDHSSTPPSLSPKKNQNKLRSLLFGRRSHSSVGKLGNKSASFDSVEELFEEGSAMLDERLGRNFPSKANSSPSRCAICQVDQAPFEDLVTDNGGGCCSAPSTPWVGPYLCSDCRKKK 417          
BLAST of FC921166 vs. ExPASy Swiss-Prot
Match: P2C15_ARATH (Probable protein phosphatase 2C 15 OS=Arabidopsis thaliana GN=At1g68410 PE=2 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 6.989e-87
Identity = 159/233 (68.24%), Postives = 191/233 (81.97%), Query Frame = 1
Query:    1 SGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDIDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALTSDMAAKSCRGLPAELAAKLVVREALRSRGLKDDTTCLVVDIIPSDH---PVPAPTPRKKQNVLSSLIFGKKAHDSMKTSNKLAAVGVVEELFEEGSAMLAERLGRDFPSNASS---GLFRCAVCQVDQPPSDGLSVNSGPYFSPTSKPWEGPFLCANCRKKK 681
            SGGEVGRL++ GG E+GPLRCWPGGLCLSRSIGD+DVGEFIVP+P VKQVKLSN GGRLIIASDGIWDAL+S++AAK+CRGL AELAA+ VV+EALR RGLKDDTTC+VVDIIP ++   P P+P P+K  N   SL+F KK++ S K S KL+ VG+VEELFEEGSAMLAERLG    S  S+   G+F CA+CQ+D  PS+G+SV++G  FS + KPW+GPFLC +CR KK
Sbjct:  191 SGGEVGRLSIVGGVEIGPLRCWPGGLCLSRSIGDMDVGEFIVPVPFVKQVKLSNLGGRLIIASDGIWDALSSEVAAKTCRGLSAELAARQVVKEALRRRGLKDDTTCIVVDIIPPENFQEPPPSP-PKKHNNFFKSLLFRKKSNSSNKLSKKLSTVGIVEELFEEGSAMLAERLGSGDCSKESTTGGGIFTCAICQLDLAPSEGISVHAGSIFSTSLKPWQGPFLCTDCRDKK 422          
BLAST of FC921166 vs. ExPASy Swiss-Prot
Match: P2C12_ARATH (Probable protein phosphatase 2C 12 OS=Arabidopsis thaliana GN=At1g47380 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 4.862e-72
Identity = 130/229 (56.77%), Postives = 170/229 (74.24%), Query Frame = 1
Query:    1 SGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDIDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALTSDMAAKSCRGLPAELAAKLVVREALRSRGLKDDTTCLVVDIIPSDHPVPAPTPRKKQ--NVLSSLIFGKKAHDSMKTSNKLAAVGVVEELFEEGSAMLAERLGRDFPSNASSGLFRCAVCQVDQPPSDGLSVNSGPYFSPTSKPWEGPFLCANCRKKK 681
            SGGEVGRLN  GG E+GPLRCWPGGLCLSRSIGD+DVGE+IVP+P+VKQVKLS+AGGRLII+SDG+WDA++++ A   CRGLP E +A+ +V+EA+  +G++DDTTC+VVDI+P + P  +  P KKQ   +L S+   K +  S     + A   VVEELFEEGSAML+ERL   +P      LF CAVCQV+  P +G+S+++G       +PW+GPFLCA+C+ KK
Sbjct:  182 SGGEVGRLNTGGGTEIGPLRCWPGGLCLSRSIGDLDVGEYIVPVPYVKQVKLSSAGGRLIISSDGVWDAISAEEALDCCRGLPPESSAEHIVKEAVGKKGIRDDTTCIVVDILPLEKPAASVPPPKKQGKGMLKSMFKRKTSDSSSNIEKEYAEPDVVEELFEEGSAMLSERLDTKYPLCNMFKLFMCAVCQVEVKPGEGVSIHAGSDNCRKLRPWDGPFLCASCQDKK 410          
BLAST of FC921166 vs. ExPASy Swiss-Prot
Match: P2C40_ORYSJ (Probable protein phosphatase 2C 40 OS=Oryza sativa subsp. japonica GN=Os04g0449400 PE=2 SV=3)

HSP 1 Score: 251.136 bits (640), Expect = 3.987e-66
Identity = 122/230 (53.04%), Postives = 162/230 (70.43%), Query Frame = 1
Query:    4 GGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDIDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALTSDMAAKSCRGLPAELAAKLVVREALRSRGLKDDTTCLVVDIIPSDHPVPAPTPRKK--QNVLSSLIFGKKAHDSMKTSNK--LAAVGVVEELFEEGSAMLAERLGRDFPSNASSGLFRCAVCQVDQPPSDGLSVNSGPYFSPTSKPWEGPFLCANCRKKK 681
            GGEVGRLNV GG E+GPLRCWPGGLCLSRSIGD DVGEFI+P+P+VKQ+KLS+AGGR+II+SDG+WDALT D A    RGLP E AA  +V+EA+ S+GL+DDTTC+V+DIIP +   P   P KK  + +  ++ + K   DS   ++K       +VEE+FE+G   L+ RL  ++P      LF CA+CQV+     G+S++ G   S   +PW+GPFLC +C++KK
Sbjct:  211 GGEVGRLNVVGGAEIGPLRCWPGGLCLSRSIGDQDVGEFIIPVPYVKQIKLSSAGGRIIISSDGVWDALTVDTAFSCARGLPPEAAADQIVKEAIASKGLRDDTTCIVIDIIPPEKISPTVQPAKKAGKGLFKNIFYKKATSDSPCHADKDQCTQPDLVEEVFEDGCPSLSRRLDSEYPVRNMFKLFICAICQVELESGQGISIHEGLSKSGKLRPWDGPFLCHSCQEKK 440          
BLAST of FC921166 vs. ExPASy Swiss-Prot
Match: P2C69_ORYSJ (Probable protein phosphatase 2C 69 OS=Oryza sativa subsp. japonica GN=Os09g0459600 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.515e-65
Identity = 119/227 (52.42%), Postives = 161/227 (70.93%), Query Frame = 1
Query:    4 GGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDIDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALTSDMAAKSCRGLPAELAAKLVVREALRSRGLKDDTTCLVVDIIPSDHPVPAPTPRKKQNVLSSLIFGKKAHD-SMKTSNKLAAVGVVEELFEEGSAMLAERLGRDFPSNASSGLFRCAVCQVDQPPSDGLSVNSGPYFSPTSKPWEGPFLCANCRKKK 681
            G +VG+LN+ GG EVGPLRCWPGGLCLSRSIGD+DVGE I+P+PHVKQVKLSNAGGR+IIASDG+WD LT +MA +  RG P+++AA  +V EA+  RGL+DDTTC+VVDI+P +   P+P  +++  ++ + +F +K  D S     + A    VEE+F++GSAML++RL   +   +    F CAVCQV      G+SV+S P      + W+GPFLC +C +KK
Sbjct:  184 GSKVGKLNLVGGPEVGPLRCWPGGLCLSRSIGDMDVGECIIPVPHVKQVKLSNAGGRIIIASDGVWDDLTFEMALECSRGFPSDIAANRIVNEAIHPRGLRDDTTCIVVDILPPEKLAPSPPTKRQGKIVFNNMFRRKHTDVSFILDREYAEPDEVEEIFDDGSAMLSKRLAAGYALQSMFEPFSCAVCQVQLKAGQGISVHSNPLQHEKLQGWQGPFLCQSCNEKK 410          
BLAST of FC921166 vs. ExPASy Swiss-Prot
Match: P2C15_ORYSJ (Probable protein phosphatase 2C 15 OS=Oryza sativa subsp. japonica GN=Os02g0567200 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 4.874e-64
Identity = 120/230 (52.17%), Postives = 162/230 (70.43%), Query Frame = 1
Query:    1 SGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDIDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALTSDMAAKSCRGLPAELAAKLVVREALRSRGLKDDTTCLVVDIIPSDHPVPAPTPRKKQNV-LSSLIFGKK--AHDSMKTSNKLAAVGVVEELFEEGSAMLAERLGRDFPSNASSGLFRCAVCQVDQPPSDGLSVNSGPYFSPTSKPWEGPFLCANCRKKK 681
            SGG+VGRLNV GG E+GPLRCWPGGLCLSRSIGD DVG+FIVP+P+VKQVKLS AGGRLII+SDG+WD LT+++A    R LP E AA+ +V+EA++ +GL+DDTTC+VVDI+P    +  P  +K+  + +   +F KK  +  S  T  +     +VEE+FE+G A L++RL  ++P      LF CA+CQV+  PS G+SV+         + W+GPFLC  C++KK
Sbjct:  192 SGGDVGRLNVVGGAEIGPLRCWPGGLCLSRSIGDQDVGQFIVPVPYVKQVKLSTAGGRLIISSDGVWDVLTAEVAFNCSRTLPPEAAAEQIVKEAVQQKGLRDDTTCIVVDILPDKANLTMPHTKKQPGMGVFKNMFRKKTPSDSSSHTDREYMDPDIVEEIFEDGCAFLSKRLDSEYPVRNMFKLFICAICQVELKPSQGISVHEDSSQPGNLRRWDGPFLCQGCQEKK 421          
The following BLAST results are available for this feature:
BLAST of FC921166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
P2C05_ARATH5.525e-9272.81Probable protein phosphatase 2C 5 OS=Arabidopsis t... [more]
P2C03_ORYSJ1.965e-8972.17Probable protein phosphatase 2C 3 OS=Oryza sativa ... [more]
P2C33_ORYSJ2.837e-8871.00Probable protein phosphatase 2C 33 OS=Oryza sativa... [more]
P2C15_ARATH6.989e-8768.24Probable protein phosphatase 2C 15 OS=Arabidopsis ... [more]
P2C12_ARATH4.862e-7256.77Probable protein phosphatase 2C 12 OS=Arabidopsis ... [more]
P2C40_ORYSJ3.987e-6653.04Probable protein phosphatase 2C 40 OS=Oryza sativa... [more]
P2C69_ORYSJ1.515e-6552.42Probable protein phosphatase 2C 69 OS=Oryza sativa... [more]
P2C15_ORYSJ4.874e-6452.17Probable protein phosphatase 2C 15 OS=Oryza sativa... [more]
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Properties
Property NameValue
Genbank descriptionC32101H08EF RVDevelopN Citrus clementina cDNA clone C32101H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921166 ID=FC921166; Name=FC921166; organism=Citrus clementina; type=EST; length=687bp
AGTGGAGGTGAAGTAGGAAGGCTCAATGTTTTTGGTGGCAATGAGGTCGG
TCCCCTTCGCTGCTGGCCTGGGGGGTTATGCCTTTCGAGGTCGATTGGTG
ACATTGATGTGGGAGAGTTTATTGTTCCGATTCCTCATGTTAAGCAAGTG
AAGCTTTCAAATGCTGGAGGAAGATTGATAATCGCCTCTGATGGCATCTG
GGATGCATTAACTTCTGATATGGCTGCCAAGTCTTGTCGGGGTTTACCCG
CAGAGCTTGCTGCAAAATTGGTTGTTAGGGAGGCTCTGAGGTCAAGGGGA
CTGAAGGATGATACAACCTGCCTGGTTGTTGATATCATACCATCTGACCA
TCCTGTCCCAGCTCCAACACCTAGAAAGAAACAGAATGTGCTAAGTTCAC
TTATCTTTGGGAAGAAAGCTCATGATTCTATGAAAACATCAAACAAGCTC
GCTGCTGTTGGGGTTGTGGAGGAGCTGTTTGAAGAGGGTTCGGCTATGCT
TGCTGAAAGGTTGGGTAGGGATTTTCCTTCGAATGCGAGCTCTGGTCTTT
TCAGGTGTGCAGTCTGCCAAGTGGACCAACCACCAAGTGATGGCTTATCG
GTAAACTCAGGGCCTTATTTCTCACCCACATCAAAGCCATGGGAAGGCCC
CTTTCTCTGCGCAAATTGTCGGAAAAAGAAGATGCCA
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