FC921175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921175 vs. ExPASy Swiss-Prot
Match: RBP1C_ARATH (Ran-binding protein 1 homolog c OS=Arabidopsis thaliana GN=RANBP1C PE=2 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 1.805e-66 Identity = 123/160 (76.88%), Postives = 142/160 (88.75%), Query Frame = 1 Query: 175 MASTT-EGDHREEEVPHNEDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHEVAESQK 651 MAST E ++RE+E NEDEDTGAQVAPIV+LEEVAVTTGEEDEDA+LDLK+K+YRFDK+GNQWKERGAGTVKLLKHK TGKVRLVMRQSKTLKICANHL+ MSVQEH+GN+KSC+WHA D++DGELKDELFCIRF S+ ++FME E+AESQ+ Sbjct: 1 MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDKEGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQ 160
BLAST of FC921175 vs. ExPASy Swiss-Prot
Match: RBP1B_ARATH (Ran-binding protein 1 homolog b OS=Arabidopsis thaliana GN=RANBP1B PE=1 SV=2) HSP 1 Score: 249.595 bits (636), Expect = 1.170e-65 Identity = 123/167 (73.65%), Postives = 144/167 (86.23%), Query Frame = 1 Query: 172 AMASTTEGDHR-EEEVPHNEDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHEVAESQKRKRRTR 669 ++++ E ++R EEE NEDEDTGAQVAPIV+LEEVAVTTGEEDED ILDLK+KLYRFDKDG+QWKERGAGTVK LKH+V+GK+RLVMRQSKTLKICANHLV MSVQEHAGNDKSCVWHA D++DGELKDELFCIRF SV ++FM+ EVAES++ K ++ Sbjct: 3 SISNEPERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQWKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDFSDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESK 169
BLAST of FC921175 vs. ExPASy Swiss-Prot
Match: RBP1A_ARATH (Ran-binding protein 1 homolog a OS=Arabidopsis thaliana GN=RANBP1A PE=1 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.528e-65 Identity = 122/161 (75.78%), Postives = 137/161 (85.09%), Query Frame = 1 Query: 190 EGDHR-EEEVPHNEDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHEVAESQKRKRRTR 669 E +HR EEE NEDEDTGAQVAPIV+LEEVAVTTGEEDEDA+LDLK+KLYRFDKD NQWKERGAGTVK LKHK TGK+RLVMRQSKTLKICANH V MSVQEH GN+KSCVWHA D+ADGELKDELFCIRF S+ ++FM+ EVAES++ K ++ Sbjct: 7 EHEHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDFADGELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESK 167
BLAST of FC921175 vs. ExPASy Swiss-Prot
Match: RBP2_HUMAN (E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 8.463e-32 Identity = 69/158 (43.67%), Postives = 95/158 (60.13%), Query Frame = 1 Query: 121 TDRSHTNESPGTGKKSEAMASTTEGDHREEE-VPHNEDEDTGAQVAPIVKL-EEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRF 588 +D T PG T +H + H +D+D G P+V L +++ V TGEEDE+ +AKL+RFD + +WKERG G VK+L+HK +GK+RL+MR+ + LKICANH + P M + +AG+D+S VWHA DYAD K E IRF Sbjct: 1128 SDDMFTFHGPGKSVFGTPTLETANKNHETDGGSAHGDDDDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVESKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHALDYADELPKPEQLAIRF 1285 HSP 2 Score: 123.635 bits (309), Expect = 9.683e-28 Identity = 65/171 (38.01%), Postives = 99/171 (57.89%), Query Frame = 1 Query: 145 SPGTGKKSEAMASTTEGDHREEEVPHNEDEDTGAQVAPIVKLEE-VAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHEVAESQKR 654 SP + T+ G E +V E+ D G P+V L + V V++GEE+E + +AKLYR+DKD QWKERG G +K+L++ +VR+VMR+ + LK+CANH + P M++Q G ++ +W A D+ADGE K E +RF SF ++ E +Q++ Sbjct: 2276 SPSKSPAKLNQSGTSVGTDEESDVTQEEERD-GQYFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMTLQNMKGTERVWLWTACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAKTAQEK 2445 HSP 3 Score: 121.324 bits (303), Expect = 4.806e-27 Identity = 59/131 (45.04%), Postives = 84/131 (64.12%), Query Frame = 1 Query: 196 DHREEEVPHNEDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRF 588 D +EEV HNED PIV L EV V +GEEDE+ + +AKLYR+D+D +QWKERG G +K+L H + R++MR+ + K+CANH++ M ++ ++ + VW A+DYADGE K E +RF Sbjct: 2898 DGSDEEVVHNED----IHFEPIVSLPEVEVKSGEEDEEILFKERAKLYRWDRDVSQWKERGVGDIKILWHTMKNYYRILMRRDQVFKVCANHVITKTMELKPLNVSNNALVWTASDYADGEAKVEQLAVRF 3024 HSP 4 Score: 118.627 bits (296), Expect = 3.115e-26 Identity = 54/155 (34.84%), Postives = 98/155 (63.23%), Query Frame = 1 Query: 172 AMASTTEGDHREEEVPHNEDEDTGAQVAPIVKL-EEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHE 633 A + T GD +++ + ++ P+V++ E+V + TGEEDE + + KL+RFD + +QWKERG G +K+LK++V GK+R++MR+ + LK+CANH + M+++ +G+D++ +W A+D++DG+ K E +F + + F + E Sbjct: 1987 ANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEVSQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEE 2141
BLAST of FC921175 vs. ExPASy Swiss-Prot
Match: RBP2_MOUSE (E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.216e-31 Identity = 63/124 (50.81%), Postives = 86/124 (69.35%), Query Frame = 1 Query: 220 HNEDEDTGAQVAPIVKL-EEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRF 588 H ++ED G P+V L +++ V TGEEDE+ +AKL+RFD + +WKERG G VK+L+HK +GK+RL+MR+ + LKICANH + P M + +AG+D+S VWHA DYAD K E IRF Sbjct: 1156 HGDEEDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDGESKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHALDYADELPKPEQLAIRF 1279 HSP 2 Score: 122.865 bits (307), Expect = 1.652e-27 Identity = 68/173 (39.31%), Postives = 102/173 (58.96%), Query Frame = 1 Query: 139 NESPGTGKKSEAMASTTEGDHREEEVPHNEDEDTGAQVAPIVKLEE-VAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHEVAESQKR 654 ++SP +S A T E E +V E+ D G P+V L + V V++GEE+E + +AKLYR+DKD QWKERG G +K+L++ +VR+VMR+ + LK+CANH + P M++Q G ++ VW A D+ADGE K E +RF SF ++ E +Q++ Sbjct: 2115 SKSPAKLNQSGASVGTDE----ESDVTQEEERD-GQYFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMTLQTMKGTERVWVWTACDFADGERKIEHLAVRFKLQDVADSFKKIFDEAKTAQEK 2282 HSP 3 Score: 120.553 bits (301), Expect = 8.197e-27 Identity = 64/158 (40.51%), Postives = 95/158 (60.13%), Query Frame = 1 Query: 154 TGKKSEAMASTTEG----DHREEEVPHNEDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSF 615 TG +T++G D +E+V HNED PIV L EV V +GEEDE+ + +AKLYR+D+D +QWKERG G +K+L H + R++MR+ + K+CANH++ M ++ ++ + VW A+DYADGE K E +RF + +SF Sbjct: 2709 TGAAVFGTQTTSKGGEDEDGSDEDVVHNED----IHFEPIVSLPEVEVKSGEEDEEVLFKERAKLYRWDRDVSQWKERGIGDIKILWHTMKKYYRILMRRDQVFKVCANHVITKAMELKPLNVSNNALVWTASDYADGEAKVEQLAVRFKTKEMTESF 2862 HSP 4 Score: 116.701 bits (291), Expect = 1.184e-25 Identity = 59/164 (35.98%), Postives = 104/164 (63.41%), Query Frame = 1 Query: 145 SPGTGKKSEAMASTTEGDHREEEVPHNEDEDTGAQVAPIVKL-EEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHE 633 S +GK +E A+T+ ++++ ED D P+V++ E+V + TGEEDE + + KL+RFD + +QWKERG G +K+LK++V GK+R++MR+ + LK+CANH + M+++ +G+D++ +W A+D++DG+ K E +F + + F + E Sbjct: 1817 SSQSGKVAEK-ANTSSDLEKDDDAYKTEDSDD-IHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEISQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEE 1978
BLAST of FC921175 vs. ExPASy Swiss-Prot
Match: YRB1_YEAST (Ran-specific GTPase-activating protein 1 OS=Saccharomyces cerevisiae GN=YRB1 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.556e-30 Identity = 71/170 (41.76%), Postives = 101/170 (59.41%), Query Frame = 1 Query: 157 GKKSEAMASTTEGDHREEEVPHNED---EDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWH-AADYADGELKDELFCIRFGSV*ELQSFMEMVHEVAESQKR 654 GKK+E + + + +EE D E P+V LE+V V T EEDE+ + ++AKL+RFD D +WKERG G K LK+K T KVR++MR+ KTLKICANH++ P +++ + G+D+S V+ AD A+GE + F IRFGS F E + E K+ Sbjct: 31 GKKAEKPETKKDEEDTKEETKKEGDDAPESPDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQEINKK 200
BLAST of FC921175 vs. ExPASy Swiss-Prot
Match: RANG_SCHPO (Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe GN=sbp1 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.556e-30 Identity = 73/174 (41.95%), Postives = 98/174 (56.32%), Query Frame = 1 Query: 151 GTGKKSEAMASTTEGDHREEEVPHNEDEDTG-----AQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWH-AADYADGELKDELFCIRFGSV*ELQSFMEMVHEVAESQKR 654 G K+ ++T +E+ P DED PIVKL V T EE+E ++AKL+RFDK ++WKERG G +LLKHK TGK RLVMR+ KTLK+CANHL++P M + + G+D+S VW AAD ++GE E F IRF + F E + E + Sbjct: 41 GVAKQENKSGASTN----DEKKPAEGDEDAEPASPEVHFEPIVKLSAVETKTNEEEETVEFKMRAKLFRFDKAASEWKERGTGDARLLKHKETGKTRLVMRRDKTLKVCANHLLMPEMKLTPNVGSDRSWVWTVAADVSEGEPTAETFAIRFANSENANLFKENFEKYQEENAK 210
BLAST of FC921175 vs. ExPASy Swiss-Prot
Match: RANG_HUMAN (Ran-specific GTPase-activating protein OS=Homo sapiens GN=RANBP1 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.305e-29 Identity = 73/168 (43.45%), Postives = 102/168 (60.71%), Query Frame = 1 Query: 172 AMASTTEGDHREEEVPHNEDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRF--DKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHA-ADYADGELKDELFCIRFGSV*ELQSFM----EMVHEVAESQKR 654 A A T DH + + ++ + Q PIV L E + T EEDE+ + ++AKL+RF + D +WKERG G VKLLKHK G +RL+MR+ KTLKICANH + PMM ++ +AG+D++ VW+ AD+AD K EL IRF + Q F E E+ E +K+ Sbjct: 2 AAAKDTHEDH-DTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKK 168
BLAST of FC921175 vs. ExPASy Swiss-Prot
Match: RANG_BOVIN (Ran-specific GTPase-activating protein OS=Bos taurus GN=RANBP1 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.305e-29 Identity = 73/168 (43.45%), Postives = 102/168 (60.71%), Query Frame = 1 Query: 172 AMASTTEGDHREEEVPHNEDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRF--DKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHA-ADYADGELKDELFCIRFGSV*ELQSFM----EMVHEVAESQKR 654 A A T DH + + ++ + Q PIV L E + T EEDE+ + ++AKL+RF + D +WKERG G VKLLKHK G +RL+MR+ KTLKICANH + PMM ++ +AG+D++ VW+ AD+AD K EL IRF + Q F E E+ E +K+ Sbjct: 2 AAAKDTHEDH-DTSTENADESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKQELLAIRFLNAENAQKFKTKFEECRKEIEEKEKK 168
BLAST of FC921175 vs. ExPASy Swiss-Prot
Match: RANG_MOUSE (Ran-specific GTPase-activating protein OS=Mus musculus GN=Ranbp1 PE=1 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 8.758e-29 Identity = 73/168 (43.45%), Postives = 100/168 (59.52%), Query Frame = 1 Query: 175 MASTTEGDHREEEVPHNEDEDT-GAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRF--DKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHA-ADYADGELKDELFCIRFGSV*ELQSFM----EMVHEVAESQKR 654 MA+ + + N DE Q PIV L E + T EEDE+ + ++AKL+RF + D +WKERG G VKLLKHK G +RL+MR+ KTLKICANH + PMM ++ +AG+D++ VW+ AD+AD K EL IRF + Q F E E+ E +K+ Sbjct: 1 MAAAKDSHEDHDTSTENADESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKK 168 The following BLAST results are available for this feature:
BLAST of FC921175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921175 ID=FC921175; Name=FC921175; organism=Citrus clementina; type=EST; length=692bpback to top |