FC921243

Overview
NameFC921243
Unique NameFC921243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14566 contig Ccv1_Contig14566:17..734. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC921243 vs. ExPASy Swiss-Prot
Match: AKR2_ARATH (Ankyrin repeat domain-containing protein 2 OS=Arabidopsis thaliana GN=AKR2 PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 3.888e-51
Identity = 96/153 (62.75%), Postives = 119/153 (77.78%), Query Frame = 1 
Query:  259 FDFSAMSGLLNDPSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMLESLTNPTKKDQIEERMAXIKEDPSLKPILDEIESGGPSAMMKYWNDKDVLQKLGEAWVLQLWG 717
            FDFS M+ +LNDPSI+E+AEQIAKDPAFN +AEQLQ+++  A  E   P FD  QY +TMQQVM NP+F TMAE+LG AL+QDP MS  L++ +NP   +   ERMA +KEDP LKPILDEI++GGPSAMMKYWND +VL+KLGEA  + + G
Sbjct:   47 FDFSNMASILNDPSIREMAEQIAKDPAFNQLAEQLQRSIPNAGQEGGFPNFDPQQYVNTMQQVMHNPEFKTMAEKLGTALVQDPQMSPFLDAFSNPETAEHFTERMARMKEDPELKPILDEIDAGGPSAMMKYWNDPEVLKKLGEAMGMPVAG 199
The following BLAST results are available for this feature:
BLAST of FC921243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AKR2_ARATH3.888e-5162.75Ankyrin repeat domain-containing protein 2 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionC32102G09EF RVDevelopN Citrus clementina cDNA clone C32102G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921243 ID=FC921243; Name=FC921243; organism=Citrus clementina; type=EST; length=718bp
GATAGGTTTTATTCTTAATTTTAAACCCAATCTAATCTCAATCTCCTTCA
CAGTCTCTCCGATTCAGCAGCTGTTTAGTTCGCATGGCGTCTCCTCCCAC
CAAGGATGCTCCCGCTGATAAGAAAGCAGAAGGATCGACCCCTAAGTCAG
AAGCAATTTCGGGGTCTGTTAGAGACTCATCCAGTTCGCCTTCCGCTGCT
TCTGCTGCTTCTGCTGCAAGTGCTTTTCCAGGAGTTGGTGGCGCTGCTCC
AAATCCTTTTTGATTTCTCCGCCATGAGTGGCCTTCTTAATGATCCGAGC
ATTAAGGAACTAGCTGAACAGATTGCGAAAGATCCAGCATTCAATTCCAT
GGCCGAGCAACTTCAGAAAACTTTGCATGGTGCAAATGCTGAGGAGAGTA
TTCCACAGTTTGACACAACACAGTATTACTCCACCATGCAACAGGTTATG
CAGAATCCTCAGTTTATGACTATGGCTGAGCGCCTTGGTAATGCTTTAAT
GCAGGACCCATCAATGTCTCATATGCTGGAGAGTTTGACAAACCCTACAA
AAAAAGACCAGATCGAGGAAAGAATGGCAAANATCAAGGAAGATCCCTCT
TTGAAGCCTATTTTGGATGAGATAGAGTCTGGTGGACCATCTGCTATGAT
GAAGTACTGGAATGATAAAGATGTTTTGCAGAAATTGGGTGAAGCATGGG
TCTTGCAGTTGTGGGGAT
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