FC921249
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL2C4_ARATH (Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2) HSP 1 Score: 335.88 bits (860), Expect = 1.023e-91 Identity = 162/208 (77.88%), Postives = 186/208 (89.42%), Query Frame = 1 Query: 1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624 VVG+IIPWNFP+ MF KV+PA+AAGCTM+VKPAEQT L AL++AHL+K AG+PDGVLN+V GFG TAGAAIASHMD+DKVSFTGSTDVGR++MQAAA SNLK VSLELGGKSPLLIF+D D++ AAD+ALLG +NKGEICVASSRV+VQEGIYD+ +KLVEKAK W VGDPFD RQGPQVDK+QF++ILSYIEHGK EGATLL Sbjct: 161 VVGNIIPWNFPSIMFATKVAPAMAAGCTMVVKPAEQTSLSALFYAHLSKEAGIPDGVLNIVTGFGSTAGAAIASHMDVDKVSFTGSTDVGRKIMQAAAASNLKKVSLELGGKSPLLIFNDADIDKAADLALLGCFYNKGEICVASSRVFVQEGIYDKVVEKLVEKAKDWTVGDPFDSTARQGPQVDKRQFEKILSYIEHGKNEGATLL 368
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1A1_CHICK (Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 1.698e-70 Identity = 124/207 (59.90%), Postives = 162/207 (78.26%), Query Frame = 1 Query: 1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621 V G IIPWNFP MF K++PAL G T++VKPAEQTPL ALY L K AG P GV+N+VPGFGPTAGAAI+ HMDIDKVSFTGST+VG+ + +AA +NLK V+LELGGKSP +IF D D++ AA+ A +G+ +++G+ C+A SR++V+E IYDEF ++ +E+AK + +GDP P V+QGPQ+DK+QF +IL IE GK+EGA L Sbjct: 170 VCGQIIPWNFPLVMFIWKIAPALCCGNTVVVKPAEQTPLSALYMGSLIKEAGFPPGVVNIVPGFGPTAGAAISHHMDIDKVSFTGSTEVGKLIKEAAGKTNLKRVTLELGGKSPNIIFADADLDEAAEFAHIGLFYHQGQCCIAGSRIFVEEPIYDEFVRRSIERAKKYTLGDPLLPGVQQGPQIDKEQFQKILDLIESGKKEGAKL 376
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1A1_MOUSE (Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5) HSP 1 Score: 264.233 bits (674), Expect = 3.782e-70 Identity = 122/207 (58.94%), Postives = 162/207 (78.26%), Query Frame = 1 Query: 1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621 V G IIPWNFP MF K+ PAL+ G T++VKPAEQTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST VG+ + +AA SNLK V+LELGGKSP ++F D D++ A + A G+ +++G+ CVA+SR++V+E +YDEF K+ VE+AK +V+G+P P + QGPQ+DK+Q D+IL IE GK+EGA L Sbjct: 162 VCGQIIPWNFPMLMFIWKIGPALSCGNTVVVKPAEQTPLTALHLASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVKRSVERAKKYVLGNPLTPGINQGPQIDKEQHDKILDLIESGKKEGAKL 368
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1A1_SHEEP (Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 PE=1 SV=2) HSP 1 Score: 263.462 bits (672), Expect = 6.451e-70 Identity = 121/207 (58.45%), Postives = 163/207 (78.74%), Query Frame = 1 Query: 1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621 V G IIPWNFP MF K+ PAL+ G T++VKPAEQTPL AL+ L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +AA SNLK VSLELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ VE+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L Sbjct: 162 VCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKL 368
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1A1_BOVIN (Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 PE=2 SV=3) HSP 1 Score: 263.462 bits (672), Expect = 6.451e-70 Identity = 121/207 (58.45%), Postives = 163/207 (78.74%), Query Frame = 1 Query: 1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621 V G IIPWNFP MF K+ PAL+ G T++VKPAEQTPL AL+ L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +AA SNLK VSLELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ VE+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L Sbjct: 162 VCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKL 368
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1A1_HORSE (Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1A1 PE=1 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 1.437e-69 Identity = 122/207 (58.94%), Postives = 164/207 (79.23%), Query Frame = 1 Query: 1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621 V G I+PWNFP MF K++PAL+ G T++VKPAEQTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +AA SNLK V+LELGGKSP ++F D D+ TA ++ + +++G+ CVA+SR++V+E IYDEF ++ VE+AK +V+G+P P V QGPQ+DK+Q+D+IL IE GK+EGA L Sbjct: 161 VCGQILPWNFPLLMFLWKIAPALSCGNTVVVKPAEQTPLSALHVATLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPFIVFADADLETALEVTHQALFYHQGQCCVAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYDKILDLIESGKKEGAKL 367
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1A1_RABIT (Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 2.452e-69 Identity = 122/207 (58.94%), Postives = 163/207 (78.74%), Query Frame = 1 Query: 1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621 V G IIPWNFP M K+ PAL+ G T+IVKPAEQTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +AA SNLK V+LELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ VE+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L Sbjct: 157 VCGQIIPWNFPLVMLIWKIGPALSCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLAPEVNQGPQIDKEQYNKILDLIESGKKEGAKL 363
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1A1_RAT (Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3) HSP 1 Score: 261.151 bits (666), Expect = 3.202e-69 Identity = 121/207 (58.45%), Postives = 161/207 (77.78%), Query Frame = 1 Query: 1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621 V G IIPWNFP MF K+ PAL+ G T++VKPAEQTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST VG+ + +AA SNLK V+LELGGKSP ++F D D++ A + A G+ +++G+ CVA+SR++V+E +YDEF +K VE+AK +V+G+P + QGPQ+DK+Q D+IL IE GK+EGA L Sbjct: 162 VCGQIIPWNFPLLMFIWKIGPALSCGNTVVVKPAEQTPLTALHMASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVRKSVERAKKYVLGNPLTQGINQGPQIDKEQHDKILDLIESGKKEGAKL 368
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1A1_HUMAN (Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2) HSP 1 Score: 261.151 bits (666), Expect = 3.202e-69 Identity = 120/207 (57.97%), Postives = 162/207 (78.26%), Query Frame = 1 Query: 1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621 V G IIPWNFP M K+ PAL+ G T++VKPAEQTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +AA SNLK V+LELGGKSP ++ D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ VE+AK +++G+P P V QGPQ+DK+Q+D+IL IE GK+EGA L Sbjct: 162 VCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIYDEFVRRSVERAKKYILGNPLTPGVTQGPQIDKEQYDKILDLIESGKKEGAKL 368
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1A1_MACFA (Retinal dehydrogenase 1 OS=Macaca fascicularis GN=ALDH1A1 PE=2 SV=3) HSP 1 Score: 259.61 bits (662), Expect = 9.316e-69 Identity = 119/207 (57.49%), Postives = 161/207 (77.78%), Query Frame = 1 Query: 1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621 V G IIPWNFP M K+ PAL+ G T++VKPAEQTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +AA SNLK V+LELGGKSP ++ D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ VE+AK +++G+P P QGPQ+DK+Q+D+IL IE GK+EGA L Sbjct: 162 VCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIYDEFVRRSVERAKKYILGNPLTPGATQGPQIDKEQYDKILDLIESGKKEGAKL 368 The following BLAST results are available for this feature:
BLAST of FC921249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921249 ID=FC921249; Name=FC921249; organism=Citrus clementina; type=EST; length=626bpback to top |