FC921254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921254 vs. ExPASy Swiss-Prot
Match: ODBA_RAT (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment) OS=Rattus norvegicus GN=Bckdha PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.357e-16 Identity = 44/100 (44.00%), Postives = 56/100 (56.00%), Query Frame = 2 Query: 401 FPGGRVAFTPNMRFISESSEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAXRQGRISFYLTTSGEEGYHIASAAAIKMMTL 700 FPG F + FI + IP YRV+D GQ S + + +K+Y M L TMD I YE+ RQGRISFY+T GEEG H+ SAAA++ L Sbjct: 50 FPGASAEFVDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEEVLKLYRSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALERTDL 149
BLAST of FC921254 vs. ExPASy Swiss-Prot
Match: ODBA_PANTR (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Pan troglodytes GN=BCKDHA PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.947e-16 Identity = 43/95 (45.26%), Postives = 54/95 (56.84%), Query Frame = 2 Query: 401 FPGGRVAFTPNMRFISESSEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAXRQGRISFYLTTSGEEGYHIASAAAI 685 FPG F + FI + IP YRV+D GQ S + + +K+Y M L TMD I YE+ RQGRISFY+T GEEG H+ SAAA+ Sbjct: 54 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAAL 148
BLAST of FC921254 vs. ExPASy Swiss-Prot
Match: ODBA_MACFA (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Macaca fascicularis GN=BCKDHA PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.947e-16 Identity = 43/95 (45.26%), Postives = 54/95 (56.84%), Query Frame = 2 Query: 401 FPGGRVAFTPNMRFISESSEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAXRQGRISFYLTTSGEEGYHIASAAAI 685 FPG F + FI + IP YRV+D GQ S + + +K+Y M L TMD I YE+ RQGRISFY+T GEEG H+ SAAA+ Sbjct: 54 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAAL 148
BLAST of FC921254 vs. ExPASy Swiss-Prot
Match: ODBA_HUMAN (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Homo sapiens GN=BCKDHA PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.947e-16 Identity = 43/95 (45.26%), Postives = 54/95 (56.84%), Query Frame = 2 Query: 401 FPGGRVAFTPNMRFISESSEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAXRQGRISFYLTTSGEEGYHIASAAAI 685 FPG F + FI + IP YRV+D GQ S + + +K+Y M L TMD I YE+ RQGRISFY+T GEEG H+ SAAA+ Sbjct: 54 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAAL 148
BLAST of FC921254 vs. ExPASy Swiss-Prot
Match: ODBA_MOUSE (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Mus musculus GN=Bckdha PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.155e-16 Identity = 43/100 (43.00%), Postives = 55/100 (55.00%), Query Frame = 2 Query: 401 FPGGRVAFTPNMRFISESSEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAXRQGRISFYLTTSGEEGYHIASAAAIKMMTL 700 FPG F + FI + IP YRV+D GQ S + + +K Y M L TMD I YE+ R+GRISFY+T GEEG H+ SAAA++ L Sbjct: 51 FPGASAEFVDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEEVLKFYRSMTLLNTMDRILYESQREGRISFYMTNYGEEGTHVGSAAALERTDL 150
BLAST of FC921254 vs. ExPASy Swiss-Prot
Match: ODBA_BOVIN (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Bos taurus GN=BCKDHA PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.155e-16 Identity = 43/95 (45.26%), Postives = 53/95 (55.79%), Query Frame = 2 Query: 401 FPGGRVAFTPNMRFISESSEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAXRQGRISFYLTTSGEEGYHIASAAAI 685 FPG F + FI + IP YRV+D GQ S + + +K Y M L TMD I YE+ RQGRISFY+T GEEG H+ SAAA+ Sbjct: 64 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEKVLKFYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAAL 158
BLAST of FC921254 vs. ExPASy Swiss-Prot
Match: ODBA_DICDI (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Dictyostelium discoideum GN=bkdA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14 Identity = 40/78 (51.28%), Postives = 52/78 (66.67%), Query Frame = 2 Query: 467 IPCYRVLDDDG---QPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAXRQGRISFYLTTSGEEGYHIASAAAIKM 691 IPCY ++D +G +P D +F K IKMY M+TL MD+I Y+ RQGRISFY+T+ GEE HI SAAA++M Sbjct: 64 IPCYTIMDQEGVVSKPDQDPNFSKEE---VIKMYTTMLTLNVMDSILYDVQRQGRISFYMTSFGEEAIHIGSAAALEM 138 The following BLAST results are available for this feature:
BLAST of FC921254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921254 ID=FC921254; Name=FC921254; organism=Citrus clementina; type=EST; length=705bpback to top |