FC921263

Overview
NameFC921263
Unique NameFC921263
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3541 contig Ccv1_Contig3541:30..765. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921263 vs. ExPASy Swiss-Prot
Match: CIPK6_ARATH (CBL-interacting serine/threonine-protein kinase 6 OS=Arabidopsis thaliana GN=CIPK6 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.116e-31
Identity = 71/119 (59.66%), Postives = 88/119 (73.95%), Query Frame = 2
Query:  359 NSNGGGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMXSKSKIYFAMDLVKGGELFNRLPR-KITRDVAGLF 712
            N + GG     LLHG+YELGR+LGHGTFAKVY ARN+QTGKS+A               +QIKREISVM+MVKH +IVELHEVM SKSKIYFAM+LV+GGELF ++ + ++  DVA ++
Sbjct:    9 NGSDGGSSTG-LLHGRYELGRLLGHGTFAKVYHARNIQTGKSVAMKVVGKEKVVKVGMVDQIKREISVMRMVKHPNIVELHEVMASKSKIYFAMELVRGGELFAKVAKGRLREDVARVY 126          
BLAST of FC921263 vs. ExPASy Swiss-Prot
Match: CIPKK_ARATH (CBL-interacting serine/threonine-protein kinase 20 OS=Arabidopsis thaliana GN=CIPK20 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.840e-25
Identity = 59/110 (53.64%), Postives = 79/110 (71.82%), Query Frame = 2
Query:  377 DDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMXSKSKIYFAMDLVKGGELFNRLPR-KITRDVA 703
            D    +L  KYELGR+LG GTFAKVY ARN++TG+S+A               +QIKREISVM++V+H H+V LHEVM SK+KIYFAM+ VKGGELF+++ + K+  ++A
Sbjct:    2 DKNGIVLMRKYELGRLLGQGTFAKVYHARNIKTGESVAIKVIDKQKVAKVGLIDQIKREISVMRLVRHPHVVFLHEVMASKTKIYFAMEYVKGGELFDKVSKGKLKENIA 111          
BLAST of FC921263 vs. ExPASy Swiss-Prot
Match: CIPK6_ORYSJ (CBL-interacting protein kinase 6 OS=Oryza sativa subsp. japonica GN=CIPK6 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.554e-25
Identity = 59/114 (51.75%), Postives = 80/114 (70.18%), Query Frame = 2
Query:  368 GGGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMXSKSKIYFAMDLVKGGELFNRLPR--KITRDVA 703
            GGG    T+L G+YE+GR+LGHG F +V++AR+L+TG+S+A               EQIKREI+VMK V H +IVELHEVM ++SKIY A++LV+GGELF R+ R  ++  D A
Sbjct:   14 GGG----TVLQGRYEMGRVLGHGNFGRVHVARDLRTGRSVAVKVVAKEKVVRAGMMEQIKREIAVMKRVSHPNIVELHEVMATRSKIYLALELVRGGELFGRIVRLGRVREDAA 123          
BLAST of FC921263 vs. ExPASy Swiss-Prot
Match: CIPK5_ORYSJ (CBL-interacting protein kinase 5 OS=Oryza sativa subsp. japonica GN=CIPK5 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.554e-25
Identity = 58/110 (52.73%), Postives = 79/110 (71.82%), Query Frame = 2
Query:  377 DDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMXSKSKIYFAMDLVKGGELFNRLPR-KITRDVA 703
            + + ++L  +YELGRMLG GTFAKVY ARNL + +S+A               +QIKREIS+M++V+H +IV+LHEVM SKSKIYFAM+ V+GGELF+R+ R ++  D A
Sbjct:    2 EKKASILMNRYELGRMLGQGTFAKVYHARNLASNQSVAIKVIDKEKVLRVGMIDQIKREISIMRLVRHPNIVQLHEVMASKSKIYFAMEYVRGGELFSRVARGRLKEDAA 111          
BLAST of FC921263 vs. ExPASy Swiss-Prot
Match: CIPKB_ORYSJ (CBL-interacting protein kinase 11 OS=Oryza sativa subsp. japonica GN=CIPK11 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.251e-24
Identity = 56/115 (48.70%), Postives = 79/115 (68.70%), Query Frame = 2
Query:  380 DRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMXSKSKIYFAMDLVKGGELFNRLPR--KITRDVAGLFQH 718
            D  ++L G+YE+G+ LG GTFAKVY ARNL TG+++A               EQIKREIS+M++VKH ++++L EVM SKSKIYF ++  KGGELFN++ +  K++ D A  + H
Sbjct:    3 DGRSILMGRYEVGKQLGQGTFAKVYYARNLTTGQAVAIKMINKDKVMKVGLMEQIKREISIMRLVKHPNVLQLFEVMASKSKIYFVLEYAKGGELFNKIAKEGKLSEDSARRYFH 117          
BLAST of FC921263 vs. ExPASy Swiss-Prot
Match: CIPKQ_ORYSJ (CBL-interacting protein kinase 26 OS=Oryza sativa subsp. japonica GN=CIPK26 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.545e-24
Identity = 57/115 (49.57%), Postives = 77/115 (66.96%), Query Frame = 2
Query:  377 DDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMXSKSKIYFAMDLVKGGELFNRLPR-KITRDVAGLFQH 718
            DDR T+L  +YE+GR LG G FAKVY ARNL +G+++A                QIKREIS+M++VKH +I++L EVM SKSKIYF ++  KGGELF ++ + K + DVA  + H
Sbjct:    2 DDRRTILMDRYEIGRQLGQGNFAKVYYARNLTSGQAVAIKMIDKEKVTRVGLMVQIKREISIMRLVKHPNILQLFEVMASKSKIYFVLEYAKGGELFKKISKGKFSEDVARRYFH 116          
BLAST of FC921263 vs. ExPASy Swiss-Prot
Match: CIPKJ_ARATH (CBL-interacting serine/threonine-protein kinase 19 OS=Arabidopsis thaliana GN=CIPK19 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.545e-24
Identity = 54/97 (55.67%), Postives = 71/97 (73.20%), Query Frame = 2
Query:  392 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMXSKSKIYFAMDLVKGGELFNRLPR 682
            L+ GKYE+GR+LGHGTFAKVYLARN Q+G+S+A                 IKREIS+++ V+H +IV+L EVM +KSKIYF M+ VKGGELFN++ +
Sbjct:   23 LILGKYEMGRLLGHGTFAKVYLARNAQSGESVAIKVIDKEKVLKSGLIAHIKREISILRRVRHPNIVQLFEVMATKSKIYFVMEYVKGGELFNKVAK 119          
BLAST of FC921263 vs. ExPASy Swiss-Prot
Match: CIPKF_ARATH (CBL-interacting serine/threonine-protein kinase 15 OS=Arabidopsis thaliana GN=CIPK15 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.694e-23
Identity = 57/110 (51.82%), Postives = 77/110 (70.00%), Query Frame = 2
Query:  377 DDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMXSKSKIYFAMDLVKGGELFNRLPR-KITRDVA 703
            + + ++L  +YE+G+ LG GTFAKVY AR+L+TG S+A               EQIKREIS M++++H +IVELHEVM +KSKIYF M+ VKGGELFN++   K+  DVA
Sbjct:    2 EKKGSVLMLRYEVGKFLGQGTFAKVYHARHLKTGDSVAIKVIDKERILKVGMTEQIKREISAMRLLRHPNIVELHEVMATKSKIYFVMEHVKGGELFNKVSTGKLREDVA 111          
BLAST of FC921263 vs. ExPASy Swiss-Prot
Match: CIPK2_ORYSJ (CBL-interacting protein kinase 2 OS=Oryza sativa subsp. japonica GN=CIPK2 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.694e-23
Identity = 55/110 (50.00%), Postives = 77/110 (70.00%), Query Frame = 2
Query:  377 DDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMXSKSKIYFAMDLVKGGELFNRLPR-KITRDVA 703
            + R  +L  KYE+G++LG GTFAKVY ARN +T +S+A               +QIKREISVMK+V+H +IV+L+EVM +K+KIYF ++ VKGGELFN++ R ++  D A
Sbjct:    3 EQRGNMLMKKYEMGKLLGQGTFAKVYHARNTETSESVAIKMIDKEKVLKGGLMDQIKREISVMKLVRHPNIVQLYEVMATKTKIYFVLEHVKGGELFNKVQRGRLKEDAA 112          
BLAST of FC921263 vs. ExPASy Swiss-Prot
Match: CIPKR_ORYSJ (Putative CBL-interacting protein kinase 27 OS=Oryza sativa subsp. japonica GN=CIPK27 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.130e-23
Identity = 49/97 (50.52%), Postives = 72/97 (74.23%), Query Frame = 2
Query:  392 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMXSKSKIYFAMDLVKGGELFNRLPR 682
            +L G+YE+GR+LGHG F +V+ AR+++TG+++A               EQIKREI+VMKMV H  +VELHEVM +++K+Y A++LV+GGELF+R+ R
Sbjct:    6 VLEGRYEMGRVLGHGNFGRVHAARDVRTGRAVAMKVVSKDKVERAGMAEQIKREIAVMKMVSHPSVVELHEVMATRTKVYLALELVRGGELFDRIAR 102          
The following BLAST results are available for this feature:
BLAST of FC921263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CIPK6_ARATH6.116e-3159.66CBL-interacting serine/threonine-protein kinase 6 ... [more]
CIPKK_ARATH3.840e-2553.64CBL-interacting serine/threonine-protein kinase 20... [more]
CIPK6_ORYSJ8.554e-2551.75CBL-interacting protein kinase 6 OS=Oryza sativa s... [more]
CIPK5_ORYSJ8.554e-2552.73CBL-interacting protein kinase 5 OS=Oryza sativa s... [more]
CIPKB_ORYSJ3.251e-2448.70CBL-interacting protein kinase 11 OS=Oryza sativa ... [more]
CIPKQ_ORYSJ5.545e-2449.57CBL-interacting protein kinase 26 OS=Oryza sativa ... [more]
CIPKJ_ARATH5.545e-2455.67CBL-interacting serine/threonine-protein kinase 19... [more]
CIPKF_ARATH4.694e-2351.82CBL-interacting serine/threonine-protein kinase 15... [more]
CIPK2_ORYSJ4.694e-2350.00CBL-interacting protein kinase 2 OS=Oryza sativa s... [more]
CIPKR_ORYSJ6.130e-2350.52Putative CBL-interacting protein kinase 27 OS=Oryz... [more]

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Properties
Property NameValue
Genbank descriptionC32103A05EF RVDevelopN Citrus clementina cDNA clone C32103A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921263 ID=FC921263; Name=FC921263; organism=Citrus clementina; type=EST; length=736bp
GAAAGGAAGAGCGAGCAAACAACTCCCGGTAAACACCATCGATAAGCCTT
TGATCAATAGCAACAAATCAAAATCCTTCTCGTCTCCCCCCAAGAAAAAA
TAAATAAGCAAACACTACAAGCCCCTTCAGGGAATGCAGAGAGATGAGAG
GACCTTCGTGGAGATTGCCTGAGCTGTGTTTACGTGCCCAGCGGTGCGTC
GGCGGCCGTAATTGCCACCGGAAACACGTCGAAGACGGGTGATCCTCAAC
CACCACCACAACACAAAAGAAAACCTGAAAGAATTATTTAATTAGCTAAA
CTTGGTACATATATACGTATAAAAGGAAAAAAAAGACCGCGTGGAGATGG
CTACATCAAACAGTAACGGCGGAGGCGATGACAGGCCGACGTTGCTACAT
GGGAAATACGAGCTGGGGCGTATGCTAGGCCACGGAACCTTCGCGAAGGT
GTACCTGGCAAGAAATTTGCAGACGGGGAAAAGCATGGCCATGAAAGTTG
TTGGTAAAGACAAGGTTATCAAGGTGGGCATGATGGAGCAAATCAAGCGT
GAAATCTCTGTCATGAAGATGGTGAAGCACAAGCACATAGTTGAGCTACA
CGAAGTCATGGNCAGTAAGTCCAAGATTTACTTCGCCATGGACCTCGTCA
AAGGCGGCGAGCTGTTCAACAGATTACCAAGGAAGATTACGAGAGATGTT
GCAGGGTTATTTCAGCACTGATTCAGCGTTGATTCT
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