FC921265
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921265 vs. ExPASy Swiss-Prot
Match: BXDC1_ARATH (Brix domain-containing protein 1 homolog OS=Arabidopsis thaliana GN=At3g23620 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.273e-38 Identity = 72/97 (74.23%), Postives = 85/97 (87.63%), Query Frame = 1 Query: 343 VLKVKTPKNPRVKRALEKRAPKLVETGKKTLILQGTKTSNTLNDVLTELYLLKKGSAIRYTRKNENIRPFESGGETSLEFFSLKTDCSIFIYGSPSR 633 +++++TPK + KR LE RAPKLVETGKKTLIL GTKTS TL+ V+TELY LKKG AIRY+R+NENIRPFESGGETSLEFFS KTDCSIF+YGS ++ Sbjct: 1 MMEIRTPKTGKAKRVLESRAPKLVETGKKTLILHGTKTSATLSSVMTELYRLKKGGAIRYSRRNENIRPFESGGETSLEFFSQKTDCSIFVYGSHTK 97 HSP 2 Score: 28.1054 bits (61), Expect = 5.273e-38 Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 3 Query: 630 KKRPDNLVIGRTY 668 KKRPDNLV+GR Y Sbjct: 97 KKRPDNLVLGRMY 109
BLAST of FC921265 vs. ExPASy Swiss-Prot
Match: BXDC1_ORYSJ (Brix domain-containing protein 1 homolog OS=Oryza sativa subsp. japonica GN=Os01g0513800 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.585e-33 Identity = 64/97 (65.98%), Postives = 80/97 (82.47%), Query Frame = 1 Query: 343 VLKVKTPKNPRVKRALEKRAPKLVETGKKTLILQGTKTSNTLNDVLTELYLLKKGSAIRYTRKNENIRPFESGGETSLEFFSLKTDCSIFIYGSPSR 633 V ++ P++ R KR L K APKLVETGKKTLIL GTKTS LN VL +L+ LK+ +A++Y++KN+NIRPFESGGETSLEFFSLKTDCS+ +YGS S+ Sbjct: 2 VAAIRVPRSQRAKRELLKHAPKLVETGKKTLILHGTKTSAVLNSVLADLFHLKRDNAVKYSKKNDNIRPFESGGETSLEFFSLKTDCSLIVYGSHSK 98 HSP 2 Score: 28.4906 bits (62), Expect = 1.585e-33 Identity = 11/13 (84.62%), Postives = 13/13 (100.00%), Query Frame = 3 Query: 630 KKRPDNLVIGRTY 668 KKRP+NLV+GRTY Sbjct: 98 KKRPNNLVLGRTY 110
BLAST of FC921265 vs. ExPASy Swiss-Prot
Match: BXDC1_MOUSE (Brix domain-containing protein 1 OS=Mus musculus GN=Bxdc1 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.439e-18 Identity = 45/95 (47.37%), Postives = 62/95 (65.26%), Query Frame = 1 Query: 349 KVKTPKNPRVKRALEKRAPKLVETGKKTLILQGTKTSNTLNDVLTELYLLKKGSAIRYTRKNENIRPFESGGETSLEFFSLKTDCSIFIYGSPSR 633 KV PK R KR LEKR PKL E K ++++G + T+ VL ++Y LKK + Y +KN RPFE +TSLEFFS K+DCS+F++GS ++ Sbjct: 6 KVLKPKTKRAKRFLEKREPKLTENIKNAMLIKGGNANATVTQVLRDMYALKKPYGVLYKKKNIT-RPFED--QTSLEFFSKKSDCSLFMFGSHNK 97 HSP 2 Score: 26.9498 bits (58), Expect = 3.439e-18 Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 3 Query: 630 KKRPDNLVIGRTY 668 KKRP+NLVIGR Y Sbjct: 97 KKRPNNLVIGRMY 109
BLAST of FC921265 vs. ExPASy Swiss-Prot
Match: BXDC1_BOVIN (Brix domain-containing protein 1 OS=Bos taurus GN=BXDC1 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.814e-18 Identity = 45/95 (47.37%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 349 KVKTPKNPRVKRALEKRAPKLVETGKKTLILQGTKTSNTLNDVLTELYLLKKGSAIRYTRKNENIRPFESGGETSLEFFSLKTDCSIFIYGSPSR 633 +V PK R KR LEKR PKL E K ++++G ++T+ VL ++Y LKK I Y +KN RPFE +TSLEFFS K+DCS+F++GS ++ Sbjct: 6 RVVKPKTKRAKRFLEKREPKLSENIKNAMLIKGGNANSTVTQVLRDVYALKKPYGILYKKKNIT-RPFED--QTSLEFFSKKSDCSLFMFGSHNK 97 HSP 2 Score: 26.9498 bits (58), Expect = 5.814e-18 Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 3 Query: 630 KKRPDNLVIGRTY 668 KKRP+NLVIGR Y Sbjct: 97 KKRPNNLVIGRMY 109
BLAST of FC921265 vs. ExPASy Swiss-Prot
Match: BXDC1_HUMAN (Brix domain-containing protein 1 OS=Homo sapiens GN=BXDC1 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.808e-17 Identity = 44/95 (46.32%), Postives = 62/95 (65.26%), Query Frame = 1 Query: 349 KVKTPKNPRVKRALEKRAPKLVETGKKTLILQGTKTSNTLNDVLTELYLLKKGSAIRYTRKNENIRPFESGGETSLEFFSLKTDCSIFIYGSPSR 633 +V PK R KR LEKR PKL E K ++++G + T+ VL ++Y LKK + Y +KN RPFE +TSLEFFS K+DCS+F++GS ++ Sbjct: 6 RVVKPKTKRAKRFLEKREPKLNENIKNAMLIKGGNANATVTKVLKDVYALKKPYGVLYKKKNIT-RPFED--QTSLEFFSKKSDCSLFMFGSHNK 97 HSP 2 Score: 26.9498 bits (58), Expect = 2.808e-17 Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 3 Query: 630 KKRPDNLVIGRTY 668 KKRP+NLVIGR Y Sbjct: 97 KKRPNNLVIGRMY 109
BLAST of FC921265 vs. ExPASy Swiss-Prot
Match: BXDC1_SCHPO (Brix domain-containing protein 1 homolog OS=Schizosaccharomyces pombe GN=SPAC926.08c PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.772e-14 Identity = 43/97 (44.33%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 343 VLKVKTPKNPRVKRALEKRAPKLVETGKKTLILQGTKTSNTLNDVLTELYLLKKGSAIRYTRKNENIRPFESGGETSLEFFSLKTDCSIFIYGSPSR 633 +L+ PKN R KRALEKR PKLVE K + L+G TS DVL +++ LKK ++ + +KN NI PFE +SLEFFS K D ++ + + ++ Sbjct: 1 MLRQVKPKNARTKRALEKREPKLVEGAKTAIFLRGNATSQISLDVLGDIHALKKPFSVNFQKKN-NILPFEDA--SSLEFFSEKNDAALAVMATHNK 94
BLAST of FC921265 vs. ExPASy Swiss-Prot
Match: RPF2_YEAST (Ribosome biogenesis protein RPF2 OS=Saccharomyces cerevisiae GN=RPF2 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.272e-13 Identity = 41/97 (42.27%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 343 VLKVKTPKNPRVKRALEKRAPKLVETGKKTLILQGTKTSNTLNDVLTELYLLKKGSAIRYTRKNENIRPFESGGETSLEFFSLKTDCSIFIYGSPSR 633 +++ PKN R KRAL KR KLVE K+ L + G + L+D++ +L LKK R+ RKN+ I PFE + LEFFS K DCS+ + + S+ Sbjct: 1 MIRTVKPKNARAKRALVKREAKLVENVKQALFIPGQSCNKNLHDIMVDLSALKKPDMKRFNRKND-IHPFED--MSPLEFFSEKNDCSLMVLMTSSK 94 The following BLAST results are available for this feature:
BLAST of FC921265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921265 ID=FC921265; Name=FC921265; organism=Citrus clementina; type=EST; length=670bpback to top |