FC921307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921307 vs. ExPASy Swiss-Prot
Match: PSD7_ARATH (Probable 26S proteasome non-ATPase regulatory subunit 7 OS=Arabidopsis thaliana GN=RPN8 PE=2 SV=1) HSP 1 Score: 427.172 bits (1097), Expect = 4.391e-119 Identity = 212/237 (89.45%), Postives = 223/237 (94.09%), Query Frame = 3 Query: 12 MDVIKTQQISSRPIEKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYH 722 MDVIKTQQIS+R IEKV+VHPLVLLSIVD+YNRVAKD+ KRVVGVLLGSS +G VDV+NSYAVPFEEDDKDP IWFLDHNYHESM+ MFKRINAKEHVVGWYSTGPKLRENDLD+H LF+ YVPNPVLVIIDVQPKELGIPTKAYY VEEVKENATQKSQKVFVHV +EIAAHEVEEIGVEHLLRDVKDTTISTLA EVT KLTALKGLDARLREIR YLDLVI+ KLPLNHEILYH Sbjct: 1 MDVIKTQQISARTIEKVVVHPLVLLSIVDHYNRVAKDSSKRVVGVLLGSSSRGVVDVTNSYAVPFEEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQKVFVHVSTEIAAHEVEEIGVEHLLRDVKDTTISTLATEVTAKLTALKGLDARLREIRSYLDLVIEGKLPLNHEILYH 237
BLAST of FC921307 vs. ExPASy Swiss-Prot
Match: PSD7_BOVIN (26S proteasome non-ATPase regulatory subunit 7 OS=Bos taurus GN=PSMD7 PE=2 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 4.158e-77 Identity = 136/224 (60.71%), Postives = 179/224 (79.91%), Query Frame = 3 Query: 51 IEKVIVHPLVLLSIVDNYNRVAK-DTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILY 719 ++KV+VHPLVLLS+VD++NR+ K +KRVVGVLLGS K +DVSNS+AVPF+EDDKD +WFLDH+Y E+MY MFK++NA+E +VGWY TGPKL +ND+ I++L Y PN VLVIIDV+PK+LG+PT+AY VEEV ++ T S K F HV SEI A E EE+GVEHLLRD+KDTT+ TL+ +T ++ LKGL+++L +IRGYL+ V KLP+NH+I+Y Sbjct: 6 VQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTS-KTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRGYLEKVATGKLPINHQIIY 228
BLAST of FC921307 vs. ExPASy Swiss-Prot
Match: PSD7_MOUSE (26S proteasome non-ATPase regulatory subunit 7 OS=Mus musculus GN=Psmd7 PE=1 SV=2) HSP 1 Score: 285.804 bits (730), Expect = 1.580e-76 Identity = 135/224 (60.27%), Postives = 178/224 (79.46%), Query Frame = 3 Query: 51 IEKVIVHPLVLLSIVDNYNRVAK-DTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILY 719 ++KV+VHPLVLLS+VD++NR+ K +KRVVGVLLGS K +DVSNS+AVPF+EDDKD +WFLDH+Y E+MY MFK++NA+E +VGWY TGPKL +ND+ I++L Y PN VLVIIDV+PK+LG+PT+AY VEEV ++ T S K F HV SEI A E EE+GVEHLLRD+KDTT+ TL+ +T ++ LKGL+++L +IR YL+ V KLP+NH+I+Y Sbjct: 6 VQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTS-KTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVASGKLPINHQIIY 228
BLAST of FC921307 vs. ExPASy Swiss-Prot
Match: PSD7_HUMAN (26S proteasome non-ATPase regulatory subunit 7 OS=Homo sapiens GN=PSMD7 PE=1 SV=2) HSP 1 Score: 285.419 bits (729), Expect = 2.063e-76 Identity = 135/224 (60.27%), Postives = 178/224 (79.46%), Query Frame = 3 Query: 51 IEKVIVHPLVLLSIVDNYNRVAK-DTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILY 719 ++KV+VHPLVLLS+VD++NR+ K +KRVVGVLLGS K +DVSNS+AVPF+EDDKD +WFLDH+Y E+MY MFK++NA+E +VGWY TGPKL +ND+ I++L Y PN VLVIIDV+PK+LG+PT+AY VEEV ++ T S K F HV SEI A E EE+GVEHLLRD+KDTT+ TL+ +T ++ LKGL+++L +IR YL+ V KLP+NH+I+Y Sbjct: 6 VQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTS-KTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIY 228
BLAST of FC921307 vs. ExPASy Swiss-Prot
Match: PSD7_DROME (26S proteasome non-ATPase regulatory subunit 7 OS=Drosophila melanogaster GN=Mov34 PE=1 SV=6) HSP 1 Score: 285.419 bits (729), Expect = 2.063e-76 Identity = 139/233 (59.66%), Postives = 184/233 (78.97%), Query Frame = 3 Query: 27 TQQISSRPIEKVIVHPLVLLSIVDNYNRVAK-DTRKRVVGVLLGS-SFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILY 719 +Q++S + KVIVHPLVLLS+VD++NR+ K +KRVVGVLLG KG +DVSNS+AVPF+EDDKD +WFLDH+Y E+MY MFK++NA+E VVGWY TGPKL +ND+ I++L Y PN VLVIID +PK+LG+PT+AY VEEV ++ + S K F HVPSEI A E EE+GVEHLLRD+KDTT+ +L+ ++T +L LKGL+A+LR+I+ YL V D K+P+NH+I+Y Sbjct: 3 SQEVS---VNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVRRYCPNSVLVIIDAKPKDLGLPTEAYISVEEVHDDGSPTS-KTFEHVPSEIGAEEAEEVGVEHLLRDIKDTTVGSLSQKITNQLMGLKGLNAQLRDIKQYLQRVGDSKMPINHQIVY 231
BLAST of FC921307 vs. ExPASy Swiss-Prot
Match: PSD7_DICDI (26S proteasome non-ATPase regulatory subunit 7 OS=Dictyostelium discoideum GN=psmD7 PE=3 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 6.004e-76 Identity = 136/218 (62.39%), Postives = 174/218 (79.82%), Query Frame = 3 Query: 63 IVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEIL 716 IVHP VLLS+VD+YNRVAKDT KRVVG LLGS+ KG VDVSN Y +PFEED+ +P IWFLDHN+HE+M++MFK+INA+E+VVGWYSTGPK+R D DI++LF Y PNPV+VIIDV PKELGIPTK+Y VEE+ ++ ++ + + F H+PS I A E EEI +EHLLRDVKD++IS+L ++T K +LK L L+E++ YL LV D LP NH+I+ Sbjct: 9 IVHPTVLLSVVDHYNRVAKDTNKRVVGALLGSNNKGVVDVSNCYGLPFEEDEANPNIWFLDHNFHENMFAMFKKINARENVVGWYSTGPKIRPADQDINELFRRYTPNPVMVIIDVAPKELGIPTKSYVTVEEINKDTSESTMR-FQHIPSSIDAVEAEEICIEHLLRDVKDSSISSLTTQITDKKISLKHLLTNLQEMQHYLKLVCDGTLPPNHQII 225
BLAST of FC921307 vs. ExPASy Swiss-Prot
Match: RPN8_NEUCR (26S proteasome regulatory subunit rpn-8 OS=Neurospora crassa GN=rpn-8 PE=3 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 6.213e-73 Identity = 133/221 (60.18%), Postives = 169/221 (76.47%), Query Frame = 3 Query: 60 VIVHPLVLLSIVDNYNRVA--KDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEIL 716 V V PLVLLS+VD+YNR K KRVVGVLLG + V VSNS+AVPFEEDDKDP +WFLDHNY ESM MFK++NA+E ++GWY +GPKLR +DLDI++LF Y PNP+LVI+DVQPKE G+PT AY+ V+E+K++ T S K FVH PS I A E EEIGVEHLLRD++D + TL+ +T ++ +L+GL RLR+I+ YL V+D +LP+NH IL Sbjct: 16 VSVAPLVLLSVVDHYNRTQANKSKSKRVVGVLLGQNDGKNVRVSNSFAVPFEEDDKDPSVWFLDHNYVESMNDMFKKVNAREKLIGWYHSGPKLRASDLDINELFKRYTPNPLLVIVDVQPKETGVPTDAYFAVDEIKDDGTTTS-KTFVHTPSIIEAEEAEEIGVEHLLRDIRDVAVGTLSTRITNQMRSLQGLHHRLRDIQAYLQKVLDGQLPVNHAIL 235
BLAST of FC921307 vs. ExPASy Swiss-Prot
Match: RPN8_SCHPO (26S proteasome regulatory subunit rpn8 OS=Schizosaccharomyces pombe GN=rpn8 PE=2 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.060e-72 Identity = 129/221 (58.37%), Postives = 172/221 (77.83%), Query Frame = 3 Query: 54 EKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEIL 716 ++VIVHPLVLLS VD+YNR AK T++RVVG+LLG + V+V+NSYA+PFEED+K+ +WFLDHN+ ESM MFK+INA E +VGWY TGP+LR +DL+I+ L Y+PNPVLVIIDV+PK +G+PT AY+ ++E++++ + KS + FVH+PS I A E EEIGVEHLLRD +D ++ TLA VT + +L+GL RL EI YL V+D +LP+NH IL Sbjct: 15 QQVIVHPLVLLSAVDSYNRSAKGTKRRVVGILLGQNNGDVVNVANSYAIPFEEDEKNASVWFLDHNFMESMNEMFKKINANEKLVGWYHTGPQLRPSDLEINNLLKKYIPNPVLVIIDVKPKSVGLPTNAYFAIDEIEDDGS-KSSRTFVHLPSSIEAEEAEEIGVEHLLRDTRDASVGTLATRVTQQAQSLQGLGQRLTEIADYLRKVVDGQLPINHAIL 234
BLAST of FC921307 vs. ExPASy Swiss-Prot
Match: RPN8_YEAST (26S proteasome regulatory subunit RPN8 OS=Saccharomyces cerevisiae GN=RPN8 PE=1 SV=3) HSP 1 Score: 236.113 bits (601), Expect = 1.436e-61 Identity = 114/222 (51.35%), Postives = 163/222 (73.42%), Query Frame = 3 Query: 54 EKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVP-NPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEIL 716 EKV + PLVLLS +D+Y R KR VGV+LG + T+ V+NS+A+PFEED+K+ +WFLDHNY E+M M K+INAKE ++GWY +GPKLR +DL I++LF Y NP+L+I+DV+ + +G+PT AY +E+VK++ T ++K F+H+P I A E EEIGVEHLLRDV+D L+ +T +L +LKGL ++L+++ YLD VI+++LP+NH IL Sbjct: 6 EKVTIAPLVLLSALDHYERTQTKENKRCVGVILGDANSSTIRVTNSFALPFEEDEKNSDVWFLDHNYIENMNEMCKKINAKEKLIGWYHSGPKLRASDLKINELFKKYTQNNPLLLIVDVKQQGVGLPTDAYVAIEQVKDDGT-STEKTFLHLPCTIEAEEAEEIGVEHLLRDVRDQAAGGLSIRLTNQLKSLKGLQSKLKDVVEYLDKVINKELPINHTIL 226
BLAST of FC921307 vs. ExPASy Swiss-Prot
Match: RPN8_CANGA (26S proteasome regulatory subunit RPN8 OS=Candida glabrata GN=RPN8 PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.073e-60 Identity = 114/222 (51.35%), Postives = 161/222 (72.52%), Query Frame = 3 Query: 54 EKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVP-NPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEIL 716 + V + PLVLLS++D+Y R KR VGV+LG S T+ V+NS+A+PFEED+K+ +WFLDHNY ESM M K+INAKE ++GWY +GPKLR +DL I++LF Y NP+L+I+DV+ +++G+PT AY VE+VK++ T ++K F+H+P + A E EEIGVEHLLRDV+D L+ +T +L +LKGL +L +I YL+ VI+ +LP+NH IL Sbjct: 6 DNVTIAPLVLLSVLDHYERTNTPEGKRCVGVILGDSQTNTIRVTNSFALPFEEDEKNSDVWFLDHNYIESMNEMCKKINAKEKLIGWYHSGPKLRASDLKINELFKKYTQGNPLLLIVDVKQQDVGLPTDAYMAVEQVKDDGT-STEKTFLHLPCTVEAEEAEEIGVEHLLRDVRDQAAGGLSIRLTNQLKSLKGLQKKLNDIVIYLNKVINNELPVNHTIL 226 The following BLAST results are available for this feature:
BLAST of FC921307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921307 ID=FC921307; Name=FC921307; organism=Citrus clementina; type=EST; length=723bpback to top |