FC921310
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921310 vs. ExPASy Swiss-Prot
Match: NYC1_ORYSJ (Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Oryza sativa subsp. japonica GN=NYC1 PE=1 SV=1) HSP 1 Score: 358.992 bits (920), Expect = 1.445e-98 Identity = 172/236 (72.88%), Postives = 198/236 (83.90%), Query Frame = 2 Query: 8 EIGRCIVTMMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAXSGGSSTPLTAVYGSTKCG 715 ++GR ++TMMS+GVVL VGFQLSGGDSQMN LIWYSWLGG+IIGTM+GAN VLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGD T+ ELEEN++EG+ A ++ L+HAKV G +CDVC+P DV+KL NFA +E GSIDIWINNAGTNKGF+PL+ F++E+I QIVSTNLVGS+LCTREAM VM+ Q KGGH+FNMDGA SGGSSTPLTAVYGSTKCG Sbjct: 110 QVGRYVITMMSSGVVLGVGFQLSGGDSQMNTLIWYSWLGGVIIGTMIGANSVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVIASRSPESVLQTINELEENIQEGLSVAKKKQREILLHAKVVGTSCDVCKPEDVKKLVNFAKDELGSIDIWINNAGTNKGFRPLVNFSDEDISQIVSTNLVGSLLCTREAMNVMQHQQKGGHVFNMDGAGSGGSSTPLTAVYGSTKCG 345
BLAST of FC921310 vs. ExPASy Swiss-Prot
Match: NYC1_ARATH (Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Arabidopsis thaliana GN=NYC1 PE=1 SV=1) HSP 1 Score: 350.132 bits (897), Expect = 6.713e-96 Identity = 176/236 (74.58%), Postives = 193/236 (81.78%), Query Frame = 2 Query: 8 EIGRCIVTMMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAXSGGSSTPLTAVYGSTKCG 715 +I R IVTM STG +L +GFQLSGGDS MN+L+WYSWLGGIIIGTM GANMVLE+H +AGPRNVVITGSTRGLGKALAREFLLSGD MTV ELE+NLKE M A S++K L AKV GIACDVC+P DV+KLSNFAV E GSI+IWINNAGTNKGF+PLL+FT E+I QIVSTNL+GSILCTR AM VM Q GGHIFNMDGA SGGSSTPLTAVYGSTKCG Sbjct: 101 QIARYIVTMTSTGAILLIGFQLSGGDSSMNSLVWYSWLGGIIIGTMTGANMVLEDHYRAGPRNVVITGSTRGLGKALAREFLLSGDRVIVTSRSSESVDMTVKELEQNLKEIMSNASESARKKLSDAKVVGIACDVCKPEDVEKLSNFAVKELGSINIWINNAGTNKGFRPLLEFTEEDITQIVSTNLIGSILCTRGAMDVMSRQHSGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 336
BLAST of FC921310 vs. ExPASy Swiss-Prot
Match: NOL_ORYSJ (Chlorophyll(ide) b reductase NOL, chloroplastic OS=Oryza sativa subsp. japonica GN=NOL PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.923e-34 Identity = 82/196 (41.84%), Postives = 113/196 (57.65%), Query Frame = 2 Query: 125 GIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAXSGGSSTPLTAVYGSTK 709 GI + G V P NV+ITGST+G+G ALA+EFL +GD VT+L KK V GI CDV E DV+ L +FA ++ IDIWINNAG+N +KPL++ ++E + ++++TN +G ++C REA+ +MR+QP+GGHIFN+DGA S G TP A YG+TK Sbjct: 52 GIRAEAVPGGGGVARRAAMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERVESAVTDL---------------KKEFGEQHVWGIVCDVREGKDVKALVDFARDKMKYIDIWINNAGSNAYSYKPLVETSDEALMEVITTNTLGLMICCREAINMMRNQPRGGHIFNIDGAGSDGRPTPRFAAYGATK 232
BLAST of FC921310 vs. ExPASy Swiss-Prot
Match: NOL_ARATH (Chlorophyll(ide) b reductase NOL, chloroplastic OS=Arabidopsis thaliana GN=NOL PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.394e-31 Identity = 76/175 (43.43%), Postives = 100/175 (57.14%), Query Frame = 2 Query: 188 PRNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAXSGGSSTPLTAVYGSTK 709 P N++ITGST+G+G ALAREFL +GD V L+E E V G CDV E DV++L ++ IDIWINNAG+N FKPL + ++E++ ++V TN +G +LC REAM +M Q +GGHIFN+DGA S G TP A YG+TK Sbjct: 79 PYNILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE----------------HVWGTKCDVTEGKDVRELVAYSQKNLKYIDIWINNAGSNAYSFKPLAEASDEDLIEVVKTNTLGLMLCCREAMNMMLTQSRGGHIFNIDGAGSDGRPTPRFAAYGATK 237
BLAST of FC921310 vs. ExPASy Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11 Identity = 56/195 (28.72%), Postives = 89/195 (45.64%), Query Frame = 2 Query: 149 GANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN--KGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI------FNMDGAXSGGSSTPLTAVYGSTK 709 G++ V + K + VITG G+G AR F+ G + V ++++ L ++A G + VH CDV DV + AV FG +D+ NNAG + F+ + + T E+ E++++ NLVG L T+ A RVM +G I ++ GA S +T A+ G T+ Sbjct: 4 GSSHVSADARKLVGKVAVITGGASGIGACTARLFVKHG------------ARVVVADIQDELGASLVAELGPDASSYVH-------CDVTNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFR-MSECTKEDFERVLAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTE 178 The following BLAST results are available for this feature:
BLAST of FC921310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921310 ID=FC921310; Name=FC921310; organism=Citrus clementina; type=EST; length=715bpback to top |