FC921313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_TOBAC (Uroporphyrinogen decarboxylase, chloroplastic OS=Nicotiana tabacum GN=DCUP PE=1 SV=1) HSP 1 Score: 321.627 bits (823), Expect = 2.319e-87 Identity = 160/218 (73.39%), Postives = 184/218 (84.40%), Query Frame = 3 Query: 36 MSC----SSISAISNFPLYXXXXXXXXXRYVRCAVGGTVAEPKNVSVAEPMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 MSC SSIS S R + C+ GGTVAEPK ++ +P+LL AVRG++VERPPVWLMRQAGRYMKSYQ++CEKYP FR+RSENVDLVVEISLQPW VF+PDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDP+ T A+V++VREF PE+SVPYVG+ALTILR+EVNN+AAVLGFVGAPFTL SYVVEGGSSK+F +IKRLAF++P Sbjct: 2 MSCNYSFSSISPSSKSAFTSPSNFNLNPRLICCSAGGTVAEPKAINATQPLLLDAVRGKEVERPPVWLMRQAGRYMKSYQLLCEKYPLFRDRSENVDLVVEISLQPWKVFRPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPLRTAADVEKVREFIPEKSVPYVGEALTILRKEVNNQAAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFAEP 219
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP2_ARATH (Uroporphyrinogen decarboxylase 2, chloroplastic OS=Arabidopsis thaliana GN=At2g40490 PE=1 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 5.004e-82 Identity = 151/191 (79.06%), Postives = 168/191 (87.96%), Query Frame = 3 Query: 108 RYVRCAVGGTVAEPKNVSV-AEPMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 R VRC+V GT + VS +EP+LL+AV+GE V+RPPVWLMRQAGRYMKSYQ +CEKYPSFR+RSEN DLVVEISLQPW VFKPDGVILFSDILTPLSGMNIPFDI+KGKGP+IF+P + A+V QVREF PEESVPYVG+AL LR EVNNEAAVLGFVGAPFTL SYV+EGGSSK+F QIKRLAFSQP Sbjct: 32 RIVRCSVEGTTVTERKVSATSEPLLLRAVKGEVVDRPPVWLMRQAGRYMKSYQTLCEKYPSFRDRSENADLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPIIFNPPQSAADVAQVREFVPEESVPYVGEALRRLRNEVNNEAAVLGFVGAPFTLSSYVIEGGSSKNFTQIKRLAFSQP 222
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP2_ORYSJ (Uroporphyrinogen decarboxylase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0337600 PE=3 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 6.117e-80 Identity = 148/190 (77.89%), Postives = 167/190 (87.89%), Query Frame = 3 Query: 114 VRC-AVGGTVAEPKNVSVAE-PMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 VRC AVG +AE V AE P+L+ A++G VERPPVWLMRQAGRYMKSYQ++CE++PSFRERSENVDLVVEISLQPW VFKPDGVILFSDILTPL GMNIPFDI+KGKGPVIFDP+ T A V++VREF PEE VPYVG+AL ILREEVNNEAAVLGFVGAPFTL SY VEGGSSK+F +IK++AFS+P Sbjct: 29 VRCSAVGEVMAETAAVGTAEEPLLVSAIKGRKVERPPVWLMRQAGRYMKSYQLLCERHPSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLPGMNIPFDIVKGKGPVIFDPLRTAAAVNEVREFVPEEWVPYVGQALNILREEVNNEAAVLGFVGAPFTLASYCVEGGSSKNFSKIKKMAFSEP 218
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_MAIZE (Uroporphyrinogen decarboxylase, chloroplastic OS=Zea mays GN=LES22 PE=2 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 1.906e-73 Identity = 132/160 (82.50%), Postives = 147/160 (91.88%), Query Frame = 3 Query: 198 EDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 E+VERPPVWLMRQAGRYMKSYQ++CE+YPSFRERSENVDLVVEISLQPW VFKPDGVILFSDILTPL GMNIPFDI+KGKGPVI+DP+ T A V++VREF PEE VPYVG+AL ILR+EV NEAAVLGFVGAPFTL SY VEGGSSK+F IK++AFS+P Sbjct: 62 EEVERPPVWLMRQAGRYMKSYQLLCERYPSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLPGMNIPFDIVKGKGPVIYDPLRTAAAVNEVREFVPEEWVPYVGQALNILRQEVKNEAAVLGFVGAPFTLASYCVEGGSSKNFTLIKKMAFSEP 221
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_HORVU (Uroporphyrinogen decarboxylase (Fragment) OS=Hordeum vulgare GN=DCUP PE=2 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 2.330e-71 Identity = 130/158 (82.28%), Postives = 143/158 (90.51%), Query Frame = 3 Query: 204 VERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 VERPPVWLMRQAGRYMKSYQ +CEKYP FRERSENVDLVVEISLQPW VFKPDGVILFSDILTPL GMNIPFDI+KGKGPVI+DP+ T A V++VREF PEE VPYVG+AL +LR EV NEAAVLGFVGAPFTL SY VEGGSSK+F +IKR+AF++P Sbjct: 1 VERPPVWLMRQAGRYMKSYQNLCEKYPLFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLPGMNIPFDIVKGKGPVIYDPLRTAAAVNEVREFVPEEWVPYVGQALNLLRGEVKNEAAVLGFVGAPFTLASYCVEGGSSKNFSKIKRMAFAEP 158
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_SYNP2 (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=hemE PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.674e-61 Identity = 111/169 (65.68%), Postives = 136/169 (80.47%), Query Frame = 3 Query: 171 PMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 P+LL+A RGE VER PVW+MRQAGRYMK Y+ + EKYPSFRERSEN DL +EISLQPWH F+PDGVI+FSDILTPL GM IPFDII+ KGP+I +PI T A+VD + FDP ES+P++ L LR+EV N + VLGFVGAP+TL +Y +EG SSK++ IK +AFS+P Sbjct: 8 PLLLRAARGEKVERTPVWMMRQAGRYMKIYRDLREKYPSFRERSENPDLAIEISLQPWHAFQPDGVIMFSDILTPLPGMGIPFDIIESKGPIIENPIRTQAQVDAMTPFDPAESLPFIKTILGTLRQEVGNASTVLGFVGAPWTLAAYAIEGKSSKNYAIIKNMAFSEP 176
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_SYNSC (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain CC9605) GN=hemE PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.156e-60 Identity = 113/169 (66.86%), Postives = 136/169 (80.47%), Query Frame = 3 Query: 171 PMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 P+LL+A RGE VERPPVW+MRQAGRYMK Y+ + +KYPSFRERSEN DL EIS+QP+H FKPDGVILFSDILTPL GM I FDII+ KGP I DPI + A+VD +R +P ES+P+VG+ L LR+ V NEAAVLGFVGAP+TL +YVVEG SSK++ IK + F +P Sbjct: 6 PLLLRAARGESVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISMQPFHAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRSMAQVDALRPLNPSESMPFVGEVLGRLRQSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMVFREP 174
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_CYAA5 (Uroporphyrinogen decarboxylase OS=Cyanothece sp. (strain ATCC 51142) GN=hemE PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.384e-60 Identity = 108/169 (63.91%), Postives = 135/169 (79.88%), Query Frame = 3 Query: 171 PMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 P LL+A RGE ++RPPVW+MRQAGRYMK Y+ + +KYPSFRERSEN DL +EISLQPW F+PDGVI+FSDILTPL GM IPFDI++ KGPVI PI T +VD +R DPEES+P++ L LR+EV N++ VLGFVG+P+TL +Y +EG SSK++ IK +AFSQP Sbjct: 8 PYLLRAARGEILDRPPVWMMRQAGRYMKVYRDLRDKYPSFRERSENPDLAIEISLQPWRAFQPDGVIMFSDILTPLPGMGIPFDIVESKGPVIDPPIRTKEQVDNLRPLDPEESLPFIKTILQSLRQEVGNQSTVLGFVGSPWTLAAYAIEGKSSKNYAIIKSMAFSQP 176
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_TRIEI (Uroporphyrinogen decarboxylase OS=Trichodesmium erythraeum (strain IMS101) GN=hemE PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 9.184e-60 Identity = 107/169 (63.31%), Postives = 136/169 (80.47%), Query Frame = 3 Query: 171 PMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 P LL+A RGE ++RPPVW+MRQAGRYMK+Y+ + EKYPSFRERSEN D+ VEISLQP+H FKPDGVILFSDILTPL + I FDII+ KGP+I PI T+A++D++ +PEES+P++ + L LR EV NEAAVLGF+GAP+TL +Y +EG S K + IK++AF QP Sbjct: 8 PYLLRATRGELLDRPPVWMMRQAGRYMKAYRDLREKYPSFRERSENTDIAVEISLQPFHAFKPDGVILFSDILTPLPAIGIDFDIIESKGPIIDPPIRTEAQIDKLHPIEPEESLPFIREILQTLRREVKNEAAVLGFIGAPWTLAAYAIEGKSCKDYTNIKKMAFCQP 176
BLAST of FC921313 vs. ExPASy Swiss-Prot
Match: DCUP_SYNPX (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain WH8102) GN=hemE PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.566e-59 Identity = 113/169 (66.86%), Postives = 136/169 (80.47%), Query Frame = 3 Query: 171 PMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLVSYVVEGGSSKHFXQIKRLAFSQP 677 P+LL+A RGE VERPPVW+MRQAGRYMK Y+ + +KYPSFRERSEN DL EIS+QP+H FKPDGVILFSDILTPL GM I FDII+ KGP I DPI + +V+ +R +P ES+P+VG+ L LRE V NEAAVLGFVGAP+TL +YVVEG SSK++ IK +AF +P Sbjct: 6 PLLLRAARGEAVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISMQPFHAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRSMDQVNALRPLNPSESMPFVGEVLGRLRESVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREP 174 The following BLAST results are available for this feature:
BLAST of FC921313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921313 ID=FC921313; Name=FC921313; organism=Citrus clementina; type=EST; length=678bpback to top |