FC921322

Overview
NameFC921322
Unique NameFC921322
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9491 contig Ccv1_Contig9491:70..804. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921322 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 5.106e-78
Identity = 147/222 (66.22%), Postives = 172/222 (77.48%), Query Frame = 1
Query:   37 MAEEKLQVPRVKLGTQGLEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKILVATKFGIAGIGDTDII-----VKGSPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIVPFSPLGRGF 687
            MA+E  +VPR+KLG+QGLEVS  G GCM +S  Y  P  E D I +I HA + GIT  DT+DVYG + NE+LLGKALK   RE++++ATKFGI  +GD         V G P YVR+ CEASLKRLD+D IDLYYQHRVD  V IE T+GE+KKLVEEGK+KYIGLSEAS  TIRRAHAVHPI AVQ+EWSLW+RD+EE+IIP CRELGIGIV +SPLGRGF
Sbjct:    1 MAKEGTKVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDTSDVYGPHTNEILLGKALKGGTRERVVLATKFGIV-LGDEKKAEGKRAVHGDPAYVRAACEASLKRLDIDCIDLYYQHRVDTRVPIEITVGELKKLVEEGKLKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGF 221          
BLAST of FC921322 vs. ExPASy Swiss-Prot
Match: IN22_MAIZE (IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.534e-77
Identity = 148/224 (66.07%), Postives = 169/224 (75.45%), Query Frame = 1
Query:   37 MAEEKLQVPRVKLGTQGLEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKILVATKFGIAGIGDTDIIVKGSPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIVPFSPLGRGFF--GGKL 702
            MA   + VPR+KLG+QGLEVS  G GCM +S  Y  P  E + I +I HA   G+TF DT+DVYG + NEVLLGKAL+   REK+ +ATKFG++   D    + G P YVR+ CE S KRL VD IDLYYQHR+DK V IE TIGE+KKLVEEGKIKYIGLSEAS  TIRRAHAVHPI AVQ+EWSLW+RD EEDIIP CRELGIGIV +SPLGRGFF  G KL
Sbjct:    1 MAAALVSVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESEMIKLIHHAVDAGVTFLDTSDVYGPHTNEVLLGKALQGGVREKVELATKFGVS-FADGKREIHGDPAYVRTACEGSFKRLGVDCIDLYYQHRIDKRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDAEEDIIPTCRELGIGIVAYSPLGRGFFSSGAKL 223          
BLAST of FC921322 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.300e-44
Identity = 103/229 (44.98%), Postives = 141/229 (61.57%), Query Frame = 1
Query:   52 LQVPRVKLGTQGLEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREK-ILVATKFGIAGIGDT-DIIVKGSPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIAAVQMEWSLWTRDIEE---DIIPLCRELGIGIVPFSPLGRGFFGGKL*WKCPAD 723
            + +P  K+G     V  +GFGCM L   Y  P SEE    ++ HA   G TF+D++D+YG  ANE  +G+  KQ  R K I +ATKFG     +T ++ +   PDY+    + SLKRL +D IDLYY HR      IE+ +G +KK VE GKI+YIGLSE S +TIRRA AV+P++AVQ+E+S ++ +IE     ++  CRE  I IV ++PLGRGF  G   +K P D
Sbjct:    1 MSIPTRKIGND--TVPAIGFGCMGLHAMYG-PSSEEANQAVLTHAADLGCTFWDSSDMYGFGANEECIGRWFKQTGRRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVHRFSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQVEYSPFSLEIERPEIGVMKACRENNITIVCYAPLGRGFLTGA--YKSPDD 224          
BLAST of FC921322 vs. ExPASy Swiss-Prot
Match: YCCK_BACSU (Uncharacterized oxidoreductase yccK OS=Bacillus subtilis GN=yccK PE=3 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.324e-30
Identity = 77/211 (36.49%), Postives = 119/211 (56.40%), Query Frame = 1
Query:   73 LGTQGLEVSKLGFGCMNLSGGYSSP-VSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLP-REKILVATKFGIAGIGDTDIIVKGSPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIVPFSPLGRGFFGGK 699
            LG   L+V ++GFG   + G    P +++E G  +++ A   G+ F DTA +YG   +E L+G+ +++   R ++++ATK G     D  I +  S +++RS  E SLKRL  DYIDLYY H  D    + E  G +K+L +EGKIK IG S      ++  +A   +   Q E+SL  RD E++++P C + GI  +P+ PL  G   GK
Sbjct:    7 LGKTKLKVKRIGFGANAVGGHNLFPNLNDETGKDLVRTALDGGVNFIDTAFIYGLGRSEELIGEVVQERGVRNELIIATK-GAHKEVDGSIELDNSREFLRSEVEKSLKRLKTDYIDLYYVHFPDGKTPLAEVAGTLKELKDEGKIKAIGASNLDYQQLQDFNADGYLEVFQAEYSLIQRDAEKELLPYCEKQGISFIPYFPLASGLLTGK 216          
BLAST of FC921322 vs. ExPASy Swiss-Prot
Match: IOLS_BACSU (Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.178e-30
Identity = 70/213 (32.86%), Postives = 119/213 (55.87%), Query Frame = 1
Query:   64 RVKLGTQGLEVSKLGFGCMNLSGGYSSP-VSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKILVATKFGIAGIGDTDIIVKGSPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIVPFSPLGRGFFGGK 699
            + KLG   L+V  +G G   + G    P ++EE G  +++ A   G+T  DTA +YG   +E L+G+ L++  RE +++ATK      G+ D +   SPD+++   + SLKRL+ DYIDL+Y H  D+    +E +  + ++ + GKI+ IG+S  S + ++ A+    +  +Q E++L  R+ E+   P  +E  I  +P+ PL  G   GK
Sbjct:    3 KAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGN-DFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGK 214          
BLAST of FC921322 vs. ExPASy Swiss-Prot
Match: YDJG_ECOLI (Uncharacterized oxidoreductase ydjG OS=Escherichia coli (strain K12) GN=ydjG PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.275e-28
Identity = 76/227 (33.48%), Postives = 121/227 (53.30%), Query Frame = 1
Query:   64 RVKLGTQGLEVSKLGFGCMNLSGG--YSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKILVATKFGIAG---------IGDTDIIVKGSPDYVRSCCEASLKRLDVDYIDLYYQHRVDKS---VAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIVPFSPLGRGFFGGKL 702
            ++ LGT  + +S++G G   + GG  ++  +  +  I  I  A   GI   DTA  Y    +EV++G+ALK+LPRE+++V TK GI           +GD  +    SP+ +R    ASL+RL +DYID+Y  H          I ET+  + +L  EGKI+ IG +    D IR       +  +Q ++S+  R +E +++PLCR+ GI +  +SPL +G   G +
Sbjct:    3 KIPLGTTDITLSRMGLGTWAIGGGPAWNGDLDRQICIDTILEAHRCGINLIDTAPGYNFGNSEVIVGQALKKLPREQVVVETKCGIVWERKGSLFNKVGDRQLYKNLSPESIREEVAASLQRLGIDYIDIYMTHWQSVPPFFTPIAETVAVLNELKSEGKIRAIGAANVDADHIREYLQYGELDIIQAKYSILDRAMENELLPLCRDNGIVVQVYSPLEQGLLTGTI 229          
BLAST of FC921322 vs. ExPASy Swiss-Prot
Match: PLR1_SCHPO (Pyridoxal reductase OS=Schizosaccharomyces pombe GN=plr1 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.711e-28
Identity = 76/213 (35.68%), Postives = 124/213 (58.22%), Query Frame = 1
Query:   85 GLEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQN---ANEVLLGKALKQLPRE--KILVATKFGIAGIGDTDIIVKGSPDYVRSCCEASLKRL-DVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIAAVQMEWSLWTRDIEED-IIPLCRELGIGIVPFSPLGRGFFGGKL 702
            G +V  +GFG M L+        +E+   ++ +A S+G  ++D  + YG +   +N  LL +  ++ P    K+ ++ K    G+    ++  G+PD+V    E  +  L     +DL+   RVD +V IE T+  +K  V+ GKI  +GLSE S +TI+RAHAV PIAAV++E+SL++RDIE + I+ +CR+L I I+ +SP  RG   G++
Sbjct:    6 GFKVGPIGFGLMGLTWK-PKQTPDEEAFEVMNYALSQGSNYWDAGEFYGVDPPTSNLDLLARYFEKYPENANKVFLSVK---GGLDFKTLVPDGNPDFVSKSVENVIAHLRGTKKLDLFQCARVDPNVPIETTMKTLKGFVDSGKISCVGLSEVSAETIKRAHAVVPIAAVEVEYSLFSRDIETNGIMDICRKLSIPIIAYSPFCRGLLTGRI 214          
BLAST of FC921322 vs. ExPASy Swiss-Prot
Match: YH5B_SCHPO (Uncharacterized oxidoreductase C215.11c OS=Schizosaccharomyces pombe GN=SPBC215.11c PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.194e-26
Identity = 73/222 (32.88%), Postives = 121/222 (54.50%), Query Frame = 1
Query:   25 TSSNMAEEKLQVPRVKLGTQGLEVSKLGFGCMNLSGG--YSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKILVATKFGIAGIGDTDIIVKGSPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIVPFSPLGRG 684
            T+++ A +  Q   VK+G   + V+++GFG M ++G   +  P  +E  I  +K      I F DTAD YG   +E LL +AL   P + +++ATK G+   G  +    G+P ++R     S++RL V  IDL+  HR+D  V  ++   E+  + +EG I+++GLSE + D I+ A    P+ +VQ  ++L  R   E ++  C + GI  +P+ PL  G
Sbjct:    4 TAASSAVDASQAGTVKVGD--MVVNRMGFGAMRVTGDGIWDEPKDKEACIATLKRLPELNINFIDTADSYGPEVSENLLREAL--YPYKGLIIATKGGLVRTGPNEWHPCGAPKFLRQEVLMSMRRLGVKQIDLWQLHRIDPKVPRKDQFSEIAAMKKEGLIRHVGLSEVTVDDIKEAEQYFPVVSVQNLFNLVNRK-NEKVLEYCEQKGIAFIPWYPLASG 220          
BLAST of FC921322 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.473e-26
Identity = 71/207 (34.30%), Postives = 113/207 (54.59%), Query Frame = 1
Query:   85 GLEVSKLGFGCMNLSGGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQL-PREKILVATKFGIAGIGDTDIIVKGSPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIVPFSPLGRGFFGGKL 702
            G+E S++G G   + G       E+  I  I+ A  +GIT  DTA  YG   +E ++GKA+K+   R+++++ATK  +    +  +    +   +    E SLKRL  DYIDLY  H  D  V IEET   MK+L + GKI+ IG+S  S + +    AV P+  +Q  ++L+ R++EE ++P  ++  I  + +  L RG   GK+
Sbjct:   10 GIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYGKRDQVILATKTALDW-KNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKM 215          
BLAST of FC921322 vs. ExPASy Swiss-Prot
Match: YAJO_ECOLI (Uncharacterized oxidoreductase yajO OS=Escherichia coli (strain K12) GN=yajO PE=3 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 5.924e-26
Identity = 74/216 (34.26%), Postives = 119/216 (55.09%), Query Frame = 1
Query:   73 LGTQGLEVSKLGFGCMNLS----GGYSSPVSEEDGITMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPR-EKILVATKFGIAGIGDTDIIVKG-SPDYVRSCCEASLKRLDVDYIDLYYQHRVDKSVAIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPIAAVQMEWSLWTRDIEEDIIPLCRELGIGIVPFSPLGRG 684
            LG   L VS+L  GCM       G ++  + EE    +IK A   GI FFDTA+ Y   ++E ++G+AL+   R E ++VATK     +GD   + +G S   +    + SL+RL +DY+D+   HR D +  IEET+  +  +V+ GK +YIG S       A    +++ H      ++Q  ++L  R+ E +++PLC + G+ ++P+SPL RG
Sbjct:    6 LGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKV-FHRVGD---LPEGLSRAQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMHASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARG 217          
The following BLAST results are available for this feature:
BLAST of FC921322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
A115_TOBAC5.106e-7866.22Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
IN22_MAIZE2.534e-7766.07IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1[more]
YAKC_SCHPO6.300e-4444.98Aldo-keto reductase yakc [NADP+] OS=Schizosaccharo... [more]
YCCK_BACSU2.324e-3036.49Uncharacterized oxidoreductase yccK OS=Bacillus su... [more]
IOLS_BACSU5.178e-3032.86Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=... [more]
YDJG_ECOLI1.275e-2833.48Uncharacterized oxidoreductase ydjG OS=Escherichia... [more]
PLR1_SCHPO3.711e-2835.68Pyridoxal reductase OS=Schizosaccharomyces pombe G... [more]
YH5B_SCHPO1.194e-2632.88Uncharacterized oxidoreductase C215.11c OS=Schizos... [more]
GS69_BACSU3.473e-2634.30General stress protein 69 OS=Bacillus subtilis GN=... [more]
YAJO_ECOLI5.924e-2634.26Uncharacterized oxidoreductase yajO OS=Escherichia... [more]

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Properties
Property NameValue
Genbank descriptionC32103F05EF RVDevelopN Citrus clementina cDNA clone C32103F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921322 ID=FC921322; Name=FC921322; organism=Citrus clementina; type=EST; length=735bp
GACTGAAACAAAGAAACCAAAACAACATCCTCAAATATGGCAGAAGAGAA
ACTCCAAGTTCCAAGAGTGAAACTGGGTACCCAAGGCCTTGAGGTTTCAA
AATTGGGTTTTGGATGCATGAACCTGAGCGGAGGTTATAGCTCTCCAGTC
TCAGAAGAGGACGGCATAACAATGATAAAGCATGCTTTCAGTAAAGGAAT
CACTTTCTTTGATACTGCTGATGTTTACGGACAAAATGCTAATGAAGTTC
TTCTTGGAAAGGCCTTGAAGCAGTTGCCTAGAGAAAAGATACTAGTAGCA
ACGAAGTTTGGGATTGCAGGAATAGGAGATACTGATATCATCGTGAAGGG
TTCCCCTGATTATGTGCGCTCGTGTTGTGAAGCTAGCTTGAAGCGTCTTG
ATGTGGATTACATTGATCTATATTATCAACATAGAGTGGACAAATCAGTT
GCTATAGAGGAAACGATTGGTGAAATGAAGAAGCTAGTGGAAGAGGGTAA
AATCAAGTACATTGGATTATCTGAGGCTAGTCCAGACACAATTAGGAGAG
CACATGCTGTTCATCCCATTGCAGCTGTACAAATGGAATGGTCCCTCTGG
ACTCGTGATATTGAGGAAGATATAATACCACTTTGCAGGGAACTTGGCAT
TGGAATAGTTCCATTCAGTCCTCTTGGTCGTGGATTTTTTGGTGGCAAGT
TGTAGTGGAAGTGTCCTGCAGATAGCTCTGCATCT
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