FC921331
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921331 vs. ExPASy Swiss-Prot
Match: IF6_BETVU (Eukaryotic translation initiation factor 6 (Fragment) OS=Beta vulgaris PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.888e-56 Identity = 108/129 (83.72%), Postives = 116/129 (89.92%), Query Frame = 2 Query: 350 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTADQELQHLRNSLPESVVVQRIEERLSALGNCIACNDHVALTHTDLDRGTEEMI 736 MATRL FEN+CEVGVFSKLTNAYCLVAIGGSE+FYSTFE ELAD PVVKTSI GTRIIG NKNGLL+PHTT DQELQHLRN LP+SVVVQRIEE+LSALGNCIACND+VALTHTDLD+ TEE+I Sbjct: 1 MATRLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFETELADYIPVVKTSIAGTRIIGPNVCRNKNGLLVPHTTTDQELQHLRNCLPDSVVVQRIEEKLSALGNCIACNDYVALTHTDLDKETEELI 129
BLAST of FC921331 vs. ExPASy Swiss-Prot
Match: IF6_YEAST (Eukaryotic translation initiation factor 6 OS=Saccharomyces cerevisiae GN=TIF6 PE=1 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.311e-49 Identity = 94/129 (72.87%), Postives = 108/129 (83.72%), Query Frame = 2 Query: 350 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTADQELQHLRNSLPESVVVQRIEERLSALGNCIACNDHVALTHTDLDRGTEEMI 736 MATR FENS E+GVFSKLTN YCLVA+GGSE+FYS FEAEL D P+V T+I GTRIIGR+ AGN+ GLL+P T DQELQHLRNSLP+SV +QR+EERLSALGN I CND+VAL H D+DR TEE+I Sbjct: 1 MATRTQFENSNEIGVFSKLTNTYCLVAVGGSENFYSAFEAELGDAIPIVHTTIAGTRIIGRMTAGNRRGLLVPTQTTDQELQHLRNSLPDSVKIQRVEERLSALGNVICCNDYVALVHPDIDRETEELI 129
BLAST of FC921331 vs. ExPASy Swiss-Prot
Match: IF6_MOUSE (Eukaryotic translation initiation factor 6 OS=Mus musculus GN=Eif6 PE=1 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 1.893e-48 Identity = 90/129 (69.77%), Postives = 107/129 (82.95%), Query Frame = 2 Query: 350 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTADQELQHLRNSLPESVVVQRIEERLSALGNCIACNDHVALTHTDLDRGTEEMI 736 MA R FEN+CEVG F+KLTNAYCLVAIGGSE+FYS FE EL+D PVV SI G RIIGR+C GN++GLL+P+ T DQELQH+RNSLP+SV ++R+EERLSALGN CND+VAL H DLDR TEE++ Sbjct: 1 MAVRASFENNCEVGCFAKLTNAYCLVAIGGSENFYSVFEGELSDAIPVVHASIAGCRIIGRMCVGNRHGLLVPNNTTDQELQHIRNSLPDSVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEIL 129
BLAST of FC921331 vs. ExPASy Swiss-Prot
Match: IF6_HUMAN (Eukaryotic translation initiation factor 6 OS=Homo sapiens GN=EIF6 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.602e-47 Identity = 87/129 (67.44%), Postives = 106/129 (82.17%), Query Frame = 2 Query: 350 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTADQELQHLRNSLPESVVVQRIEERLSALGNCIACNDHVALTHTDLDRGTEEMI 736 MA R FEN+CE+G F+KLTN YCLVAIGGSE+FYS FE EL+D PVV SI G RIIGR+C GN++GLL+P+ T DQELQH+RNSLP++V ++R+EERLSALGN CND+VAL H DLDR TEE++ Sbjct: 1 MAVRASFENNCEIGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIGRMCVGNRHGLLVPNNTTDQELQHIRNSLPDTVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEIL 129
BLAST of FC921331 vs. ExPASy Swiss-Prot
Match: IF6_DROME (Probable eukaryotic translation initiation factor 6 OS=Drosophila melanogaster GN=eIF6 PE=2 SV=3) HSP 1 Score: 189.504 bits (480), Expect = 1.602e-47 Identity = 89/129 (68.99%), Postives = 109/129 (84.50%), Query Frame = 2 Query: 350 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTADQELQHLRNSLPESVVVQRIEERLSALGNCIACNDHVALTHTDLDRGTEEMI 736 MA R+ FEN+ ++GVF+KLTN YCLVAIGGSE+FYS FEAEL D PVV ++GG RIIGRL GN+NGLL+P++T D+ELQHLRNSLP++V + R+EERLSALGN IACND+VAL H DLD+ TEE+I Sbjct: 1 MALRVQFENNDDIGVFTKLTNTYCLVAIGGSETFYSAFEAELGDTIPVVHANVGGCRIIGRLTVGNRNGLLVPNSTTDEELQHLRNSLPDAVKIYRVEERLSALGNVIACNDYVALVHPDLDKETEEII 129
BLAST of FC921331 vs. ExPASy Swiss-Prot
Match: IF6_BOVIN (Eukaryotic translation initiation factor 6 OS=Bos taurus GN=EIF6 PE=2 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 6.088e-47 Identity = 87/129 (67.44%), Postives = 105/129 (81.40%), Query Frame = 2 Query: 350 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTADQELQHLRNSLPESVVVQRIEERLSALGNCIACNDHVALTHTDLDRGTEEMI 736 MA R FEN+CE+G F+KLTN+YCLVAIGGSE+FYS FE ELA PVV SI G RIIGR+C GN++GLL+P+ T DQELQH+RN LP+SV ++R+EERLSALGN CND+VAL H DLDR TEE++ Sbjct: 1 MAVRASFENNCEIGCFAKLTNSYCLVAIGGSENFYSVFEGELAGTIPVVHASIAGCRIIGRMCVGNRHGLLVPNNTTDQELQHIRNCLPDSVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEIL 129
BLAST of FC921331 vs. ExPASy Swiss-Prot
Match: IF6_SCHPO (Eukaryotic translation initiation factor 6 OS=Schizosaccharomyces pombe GN=tif6 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.951e-47 Identity = 90/129 (69.77%), Postives = 107/129 (82.95%), Query Frame = 2 Query: 350 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTADQELQHLRNSLPESVVVQRIEERLSALGNCIACNDHVALTHTDLDRGTEEMI 736 MA R FENS E+GVFS LTN+Y LVA+GGSE+FYS FEAEL DV PVV T+IGGTRIIGRL GN+ GLL+P +T D ELQHLRNSLP+ V +QR++ERLSALGN +ACND+VAL H D++R TEE+I Sbjct: 1 MALRAQFENSNEIGVFSNLTNSYALVALGGSENFYSVFEAELGDVVPVVHTTIGGTRIIGRLTCGNRKGLLVPSSTTDNELQHLRNSLPDPVKIQRVDERLSALGNIVACNDYVALVHPDIERETEEII 129
BLAST of FC921331 vs. ExPASy Swiss-Prot
Match: IF6_DICDI (Probable eukaryotic translation initiation factor 6 OS=Dictyostelium discoideum GN=eif6 PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 6.731e-46 Identity = 92/129 (71.32%), Postives = 104/129 (80.62%), Query Frame = 2 Query: 350 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTADQELQHLRNSLPESVVVQRIEERLSALGNCIACNDHVALTHTDLDRGTEEMI 736 MATRL +ENSC+VGVF KLTN YCLV GS+ F T E LAD PVV+TSI GTRI+GRL AGNKNGLLLP+T DQELQ +RNSLP+ VVVQRIEE+ SALGNCIA ND+VAL H D+DR TEE+I Sbjct: 1 MATRLQYENSCDVGVFLKLTNKYCLVGQCGSKQFLHTVENRLADHIPVVETSIAGTRIVGRLSAGNKNGLLLPNTCTDQELQQIRNSLPDDVVVQRIEEKFSALGNCIATNDYVALVHPDIDRETEEII 129
BLAST of FC921331 vs. ExPASy Swiss-Prot
Match: IF6_CAEEL (Eukaryotic translation initiation factor 6 OS=Caenorhabditis elegans GN=eif-6 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.701e-42 Identity = 78/129 (60.47%), Postives = 103/129 (79.84%), Query Frame = 2 Query: 350 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTADQELQHLRNSLPESVVVQRIEERLSALGNCIACNDHVALTHTDLDRGTEEMI 736 MA R+ +E S +VGVF LTN+YCLV +GG+++FYS EAEL+D+ PVV TSI TRI+GRL GN++GLL+P+ T DQELQHLRNSLP+ V ++R++ERLSALGN IACNDHVA+ H ++ TE+ + Sbjct: 1 MALRVDYEGSNDVGVFCTLTNSYCLVGVGGTQNFYSILEAELSDLIPVVHTSIASTRIVGRLTVGNRHGLLVPNATTDQELQHLRNSLPDEVAIRRVDERLSALGNVIACNDHVAIVHAEISAETEQAL 129
BLAST of FC921331 vs. ExPASy Swiss-Prot
Match: IF6_ARATH (Eukaryotic translation initiation factor 6 OS=Arabidopsis thaliana GN=At2g39820 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.716e-41 Identity = 85/131 (64.89%), Postives = 104/131 (79.39%), Query Frame = 2 Query: 350 MATRLMFENS-CEVGVFSKLTNAYCLV-AIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTADQELQHLRNSLPESVVVQRIEERLSALGNCIACNDHVALTHTDLDRGTEEMI 736 MATRL ++N+ CE+GVFSKLTNAYCLV A S +F++ +E++L V P+V TSIGG+ IG LC GNKNGLLL HT DQELQHLR+SLP+ VVVQRIEE + ALGN IACND+VAL H L++ TEE+I Sbjct: 1 MATRLQYDNNNCEIGVFSKLTNAYCLVSATSASANFFTGYESKLKGVIPIVTTSIGGSGTIGSLCVGNKNGLLLSHTITDQELQHLRDSLPDEVVVQRIEEPICALGNAIACNDYVALVHPKLEKDTEEII 131 The following BLAST results are available for this feature:
BLAST of FC921331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921331 ID=FC921331; Name=FC921331; organism=Citrus clementina; type=EST; length=736bpback to top |