FC921390
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921390 vs. ExPASy Swiss-Prot
Match: U497C_VITVI (UPF0497 membrane protein 12 OS=Vitis vinifera GN=GSVIVT00013502001 PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.531e-54 Identity = 104/121 (85.95%), Postives = 115/121 (95.04%), Query Frame = 3 Query: 114 MSYLGVGVSPGNVPVYRGTVMKVVDRRIRLVELVLRCVICGLGALAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQVI 476 MSYLGVGVSPGNVPVY GT +KVVDRR+RL ELVLRCVICGLG LAAVLVGTDTQV+ IF+IQKKAKFTDMKALVFLV+ANGIAAAYSL+QG+RC V+M++GSVLF+KPLAWAIFSGDQVI Sbjct: 1 MSYLGVGVSPGNVPVYHGTNLKVVDRRVRLAELVLRCVICGLGILAAVLVGTDTQVKVIFTIQKKAKFTDMKALVFLVIANGIAAAYSLIQGLRCVVSMVRGSVLFSKPLAWAIFSGDQVI 121
BLAST of FC921390 vs. ExPASy Swiss-Prot
Match: U497E_RICCO (UPF0497 membrane protein 14 OS=Ricinus communis GN=RCOM_0864260 PE=2 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.136e-52 Identity = 99/121 (81.82%), Postives = 114/121 (94.21%), Query Frame = 3 Query: 114 MSYLGVGVSPGNVPVYRGTVMKVVDRRIRLVELVLRCVICGLGALAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQVI 476 MSYLGVGVSPGNVPVY G+ +KV+D+R+RL ELVLRC+ICGLG LAAVLVGTDTQV+EIFSIQKKA+FTDMKALVFLV+ANGIAAAYSL+QGVRC V M++GS LF+KPLAWAIFSGDQ++ Sbjct: 1 MSYLGVGVSPGNVPVYHGSNLKVIDKRVRLAELVLRCLICGLGVLAAVLVGTDTQVKEIFSIQKKARFTDMKALVFLVIANGIAAAYSLLQGVRCVVGMVRGSALFSKPLAWAIFSGDQMM 121
BLAST of FC921390 vs. ExPASy Swiss-Prot
Match: U4975_POPTR (UPF0497 membrane protein 5 OS=Populus trichocarpa GN=POPTRDRAFT_575900 PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.530e-52 Identity = 102/121 (84.30%), Postives = 110/121 (90.91%), Query Frame = 3 Query: 114 MSYLGVGVSPGNVPVYRGTVMKVVDRRIRLVELVLRCVICGLGALAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQVI 476 MSYLGVGVSPGNVPVY GT KV+DRR+RL ELVLRCVIC LG LAAVLVGTDTQV+EIFSIQKKA+FTDMKALVFLV ANGIAAAYS VQGVRC V M+KGSVLF+KPLAW IFSGDQ++ Sbjct: 1 MSYLGVGVSPGNVPVYHGTNSKVIDRRVRLAELVLRCVICCLGVLAAVLVGTDTQVKEIFSIQKKARFTDMKALVFLVAANGIAAAYSFVQGVRCVVGMVKGSVLFSKPLAWVIFSGDQMM 121
BLAST of FC921390 vs. ExPASy Swiss-Prot
Match: U4978_ARATH (UPF0497 membrane protein At2g35760 OS=Arabidopsis thaliana GN=At2g35760 PE=2 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 5.289e-42 Identity = 85/125 (68.00%), Postives = 100/125 (80.00%), Query Frame = 3 Query: 114 MSYLGVGVSPGNVPVYRGTVMKVVDRRIRLVELVLRCVICGLGALAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQVIFDCC 488 MSYLGVGVSPGNV T MK++DR++R+ EL+LRC++C L +AA+L+ TD QVREIF IQKKAKFTDMKALV LVV NGIAA YSLVQ VRC V ++KG VLF+KPLAWAIF GDQ + C Sbjct: 1 MSYLGVGVSPGNVSGST-TKMKLIDRKVRVTELILRCLVCVLALVAAILIATDVQVREIFMIQKKAKFTDMKALVLLVVVNGIAAGYSLVQAVRCVVGLMKGRVLFSKPLAWAIFFGDQAVAYLC 124
BLAST of FC921390 vs. ExPASy Swiss-Prot
Match: U4971_SORBI (UPF0497 membrane protein Sb01g044070 OS=Sorghum bicolor GN=Sb01g044070 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.059e-34 Identity = 71/119 (59.66%), Postives = 89/119 (74.79%), Query Frame = 3 Query: 132 GVSPGNVPVY----RGTVMKVVDRRIRLVELVLRCVICGLGALAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQVI 476 GVSPGNVPV G V ++RR+R EL +RC CGL LAA L+G D Q R IFS++K A+FTDM++LVFLV+ANG+AA YSL+QG RC V++L G VL N+P+AWAIFS DQV+ Sbjct: 13 GVSPGNVPVCYYGAAGRVPAALERRVRAAELFMRCAACGLAVLAAALLGADRQTRTIFSVEKTARFTDMQSLVFLVIANGMAACYSLLQGARCLVSILTGGVLINRPMAWAIFSCDQVM 131
BLAST of FC921390 vs. ExPASy Swiss-Prot
Match: U497S_ARATH (UPF0497 membrane protein At4g16442 OS=Arabidopsis thaliana GN=At4g16442 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.444e-31 Identity = 67/101 (66.34%), Postives = 82/101 (81.19%), Query Frame = 3 Query: 174 MKVVDRRIRLVELVLRCVICGLGALAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQVI 476 MK++DRR+RL EL+LRC I LA +LV TDT+V+ IF+I+K AK+TDMKA+VFLVVANGIAA YSL+Q VRC V +KG VLF+KPLAWA FSGDQ + Sbjct: 1 MKLIDRRMRLTELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVANGIAAVYSLLQSVRCVVGTMKGKVLFSKPLAWAFFSGDQAM 101
BLAST of FC921390 vs. ExPASy Swiss-Prot
Match: U4975_PICSI (UPF0497 membrane protein 5 OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.309e-24 Identity = 55/98 (56.12%), Postives = 77/98 (78.57%), Query Frame = 3 Query: 183 VDRRIRLVELVLRCVICGLGALAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQVI 476 V++R+++ E++LR + L +AAV VGTDTQ R IF+I+KKAK++DMKALVFLVV NGI A+YSL+QG+RC +++ S L +KPLAW IF+ DQ + Sbjct: 63 VEKRLKIGEVILRFAMIALALVAAVRVGTDTQTRTIFTIEKKAKYSDMKALVFLVVMNGIVASYSLLQGLRCVLSIYTQSPLTSKPLAWLIFALDQTM 160
BLAST of FC921390 vs. ExPASy Swiss-Prot
Match: U4979_MAIZE (UPF0497 membrane protein 9 OS=Zea mays PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.146e-20 Identity = 54/104 (51.92%), Postives = 71/104 (68.27%), Query Frame = 3 Query: 186 DRRIRLVELVLRCVICGLGALAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVR--CTVAMLKGSVLFNKP-----LAWAIFSGDQVI 476 +R++ + E+ LR V+CGLGALAA LV TDTQ R FS+QKKA +TDMKA+V LV A AA YSL+Q R C VA+L+ S+ +P LAW +F+ DQ + Sbjct: 12 ERKVAVAEVALRAVLCGLGALAAALVATDTQTRTFFSLQKKATYTDMKAMVLLVAAAAAAAGYSLLQAARCCCCVALLRTSI---RPRARLLLAWCVFACDQAL 112
BLAST of FC921390 vs. ExPASy Swiss-Prot
Match: U497G_ORYSJ (UPF0497 membrane protein Os12g0514300 OS=Oryza sativa subsp. japonica GN=Os12g0514300 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.554e-20 Identity = 51/100 (51.00%), Postives = 68/100 (68.00%), Query Frame = 3 Query: 183 VDRRIRLVELVLRCVICGLGALAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAML--KGSVLFNKPLAWAIFSGDQVI 476 ++R+ ++ E+ LRC +C L ALAA LVGT +Q R FS++KKA+FTDMKALV LV A+G AA YSL+Q RC A GS +AW++FS DQ + Sbjct: 7 LERKAKVAEVALRCAVCALAALAAALVGTGSQTRTFFSLEKKARFTDMKALVLLVAAHGAAAVYSLLQLARCAAAAAWKGGSNGGAAVVAWSVFSCDQAV 106
BLAST of FC921390 vs. ExPASy Swiss-Prot
Match: U497I_SORBI (UPF0497 membrane protein Sb08g016550 OS=Sorghum bicolor GN=Sb08g016550 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.073e-18 Identity = 52/103 (50.49%), Postives = 69/103 (66.99%), Query Frame = 3 Query: 186 DRRIRLVELVLRCVICGLGALAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAYSLVQ-GVRCT--VAMLKG---SVLFNKPLAWAIFSGDQVI 476 +R++++ E+ LR ++CGLGALAA LV TDTQ R FS+QKKA +TDMKA+VFLV A +AA YSL+Q RC AM G + L+W +FS DQ + Sbjct: 14 ERKVKVAEVALRALLCGLGALAAALVATDTQTRTFFSLQKKASYTDMKAMVFLVDAAAVAAGYSLLQLAARCCGGGAMSSGRGDGGGRGRALSWCVFSCDQAL 116 The following BLAST results are available for this feature:
BLAST of FC921390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921390 ID=FC921390; Name=FC921390; organism=Citrus clementina; type=EST; length=693bpback to top |