FC921411

Overview
NameFC921411
Unique NameFC921411
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14304 contig Ccv1_Contig14304:1..686. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.608e-59
Identity = 111/192 (57.81%), Postives = 144/192 (75.00%), Query Frame = 1
Query:  118 YRLYPWLRYRLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSN---SLVLRKYLGSVAFTTLQD*CLGRDLRAKKG-SGWPGLEFRQL 681
            Y LY  LR++LPPGP PWP++GNL D+KP R RCFAEW++ YGPI+SVW GS+LNVIVSNSELAK+VLK+ DQ LA+RHR ++ A  S+ G DL+WADYG HYVKVR+VCTLELFSPKR EALRPIRE+EV +M+ S++   T++ N    ++LRK+LG VAF  +     G+     +G     G+EF+ +
Sbjct:   18 YTLYQRLRFKLPPGPRPWPVVGNLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENLGKGILLRKHLGVVAFNNITRLAFGKRFVNSEGVMDEQGVEFKAI 209          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.380e-57
Identity = 109/192 (56.77%), Postives = 142/192 (73.96%), Query Frame = 1
Query:  118 YRLYPWLRYRLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDST---NSSNSLVLRKYLGSVAFTTLQD*CLG-RDLRAKKGSGWPGLEFRQL 681
            Y+L   LRY+ PPGP P PI+GNL D+KP R RC+ EW++ YGPI+SVWIGS LNV+VS++ELAK+VLK+ DQ+LA+RHR ++    S+ G DL+WADYG HYVKVR+VCTLELF+PKR E+LRPIRE+EV AM+ S+F+D     N +  L LRKYLG+VAF  +     G R + A+      GLEF+ +
Sbjct:   17 YKLIQRLRYKFPPGPSPKPIVGNLYDIKPVRFRCYYEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDCNLPENRAKGLQLRKYLGAVAFNNITRLAFGKRFMNAEGVVDEQGLEFKAI 208          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 9.451e-52
Identity = 97/183 (53.01%), Postives = 129/183 (70.49%), Query Frame = 1
Query:  145 RLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDST---NSSNSLVLRKYLGSVAFTTLQD*CLG-RDLRAKKGSGWPGLEFRQL 681
            RLPPGP PWP++GNL  +KP RCRCF EW++ YGP++SVW GS L V+VS SELAK+VLK+ DQQLA+R R ++    S+ G DL+WADYG HY+KVR++C LELF+PKR EALRPIRE+EV AM+ S+++ +T   N    +V+R +L  VAF  +     G R + A       G EF+ +
Sbjct:   30 RLPPGPRPWPVLGNLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKRFMNANGDIDEQGREFKTI 212          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.168e-23
Identity = 65/162 (40.12%), Postives = 92/162 (56.79%), Query Frame = 1
Query:  139 RYRLPPGPYPWPIIGNLLDV-KPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNS------------SNSLVLRKYLG 585
            RY+LPPGP P P+IGNLL + K +  R FA W+K YGPI+S  IGS   V++S++ELAK++LK  D   A+R   +    IS G  D+    Y  +Y ++R++    LFSP R    + +REEE R M+  I K +  S            +NS+V R+  G
Sbjct:   27 RYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAFG 188          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.218e-23
Identity = 57/148 (38.51%), Postives = 87/148 (58.78%), Query Frame = 1
Query:  145 RLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSNSLVLRKYLGS 588
            RLPPGPYPWPIIGN   V+    R     ++ YGPI+ +  GS   V+VS+SE AK  LK  D   A+R              D+ ++ YG H+ K+R++C LEL + KR E+ + +R+EE+ AMI SI+++S +   ++ + K + +
Sbjct:   41 RLPPGPYPWPIIGNFHQVRLPLHRTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASRPPTSVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTSKRIESFKHVRQEELSAMIHSIWEESESGRIAVNVSKAIST 188          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.873e-21
Identity = 55/140 (39.29%), Postives = 83/140 (59.29%), Query Frame = 1
Query:  139 RYRLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSN 558
            +  LPP P+  P+IGNL  +     R     S  YGP+M +  G    ++VS+ E A++VLK  D + ANR R KAV  +  GG D+V+A YG ++ +++ VC L L + K  E+   +RE+EV AMI  + K S++SS+
Sbjct:   30 KVNLPPSPWRLPVIGNLHQLSLHPHRSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRDVVFAPYGEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKLEKASSSSSS 169          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.282e-20
Identity = 57/152 (37.50%), Postives = 92/152 (60.53%), Query Frame = 1
Query:  148 LPPGPYPWPIIGNLLD-VKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSNSLVLRKYLGSVAFT 600
            +PPGP+  PIIG++   V     R   + +K YGP+M + +G  + +IVS++E AK+V+K  D   A+R R     I+  G TD+ ++ YG ++ +VR++C +EL S KR ++L PIREEEV+ +I  I  +  +  N   L + + S+ FT
Sbjct:   19 IPPGPWKLPIIGSIPHLVGSPPHRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASRPRSLFTDIVFYGSTDIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLIQRIASEEGSVVN---LSQAIDSLIFT 167          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.304e-20
Identity = 54/137 (39.42%), Postives = 81/137 (59.12%), Query Frame = 1
Query:  145 RLPPGPYPWPIIGNLLDVKPDRCRCFA-EWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNS 552
            RLPPGP   PIIGNL  ++    + F    SK+YGPI ++ IG     ++S++ELAK++LK  D     R   K    +S  G +L +  Y A+Y ++R++C + LFSP R  + RP+REEE + M+  I+K +  S
Sbjct:   28 RLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQS 164          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19
Identity = 53/140 (37.86%), Postives = 80/140 (57.14%), Query Frame = 1
Query:  139 RYRLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSSN 558
            +  LPP P+  P+IGNL  +     R     S  YGP+M +  G    ++VS+ E A++VLK  D + ANR R KAV  +  GG D+V+  YG ++ +++ VC L L + K   +   IREEE+  MI  + K S++SS+
Sbjct:   30 KVNLPPSPWRLPLIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDLKFANRPRSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKIREEELNEMIKKLEKASSSSSS 169          
BLAST of FC921411 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 6.183e-19
Identity = 52/139 (37.41%), Postives = 79/139 (56.83%), Query Frame = 1
Query:  139 RYRLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDSTNSS 555
            +  LPP P+  P+IGNL  +     R     S  YGP+M +  G    ++VS+SE A ++LK  D + ANR + KAV  +  GG D+V+  YG ++ +++ VC L L + K   +   +REEEV AM+  + K S +SS
Sbjct:   30 KVNLPPSPWRIPVIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMMEKLEKASCSSS 168          
The following BLAST results are available for this feature:
BLAST of FC921411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
C98A2_SOYBN1.608e-5957.81Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C98A3_ARATH4.380e-5756.77Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C98A1_SORBI9.451e-5253.01Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C83A1_ARATH3.168e-2340.12Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C75A1_PINTA9.218e-2338.51Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C71AD_ARATH3.873e-2139.29Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71DB_LOTJA4.282e-2037.50Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C83B1_ARATH7.304e-2039.42Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71AC_ARATH4.734e-1937.86Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C71AI_ARATH6.183e-1937.41Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32104F09EF RVDevelopN Citrus clementina cDNA clone C32104F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921411 ID=FC921411; Name=FC921411; organism=Citrus clementina; type=EST; length=685bp
GAATGCAACCTATAAAGTTTACGGATGCAATCACATTATAATTCACCTAT
AATTTAATTTCTTTAAATGGAACTCTTTCTCTTTATCATATCGATCATCA
TCTTCATCTTATTCGTTTACAGGCTGTATCCATGGCTGAGATACAGGCTC
CCACCAGGTCCATATCCATGGCCAATCATAGGAAACCTGTTGGATGTAAA
ACCAGACAGATGCCGGTGTTTTGCTGAGTGGTCAAAGATTTACGGTCCAA
TCATGTCCGTATGGATAGGCTCATCATTGAATGTTATAGTGTCAAATTCA
GAACTGGCCAAGCAAGTGCTCAAAGACTGTGACCAGCAGTTAGCCAATAG
GCACCGACCCAAGGCAGTGGCTATCATTTCCAAAGGTGGTACAGATCTTG
TATGGGCCGATTATGGGGCCCACTATGTTAAGGTGCGAAGAGTATGCACC
CTTGAACTCTTCTCCCCAAAAAGGACGGAGGCCCTTAGGCCCATTAGAGA
AGAGGAAGTTAGAGCCATGATTGCTTCTATTTTCAAAGACTCCACCAATA
GCAGTAACAGTTTGGTTCTGAGGAAGTATTTGGGTTCCGTGGCTTTCACA
ACATTACAAGACTAGTGTTTGGGAAGAGATTTGAGAGCGAAGAAGGGTAG
TGGATGGCCAGGACTGGAATTCAGGCAATTGTGCT
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