FC921414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921414 vs. ExPASy Swiss-Prot
Match: PINH_ARATH (Protein PINHEAD OS=Arabidopsis thaliana GN=At5g43810 PE=2 SV=1) HSP 1 Score: 368.237 bits (944), Expect = 2.401e-101 Identity = 177/199 (88.94%), Postives = 189/199 (94.97%), Query Frame = 1 Query: 1 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPD-MQENGSTDGSGHTSTKSTRAVGESGVRPLPALKENVKRVMFYC 594 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFI+VQKRHHTRLFANNHRD++STDRSGNILPGTVVD+KICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFY+EP+ MQ+NGS G +TK+T VG+ GV+PLPALKENVKRVMFYC Sbjct: 794 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYLEPEIMQDNGS---PGKKNTKTT-TVGDVGVKPLPALKENVKRVMFYC 988
BLAST of FC921414 vs. ExPASy Swiss-Prot
Match: PNH1_ORYSJ (Protein argonaute PNH1 OS=Oryza sativa subsp. japonica GN=PHN1 PE=2 SV=1) HSP 1 Score: 355.14 bits (910), Expect = 2.104e-97 Identity = 167/198 (84.34%), Postives = 181/198 (91.41%), Query Frame = 1 Query: 1 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSTDGSGHTSTKSTRAVGESGVRPLPALKENVKRVMFYC 594 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTF++VQKRHHTRLFANNH+DRSSTD+SGNILPGTVVDSKICHP+EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEP+M EN T++KS+ + V+PLPA+KE VKRVMFYC Sbjct: 789 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHKDRSSTDKSGNILPGTVVDSKICHPSEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSEN-------QTTSKSSTGTNGTSVKPLPAVKEKVKRVMFYC 979
BLAST of FC921414 vs. ExPASy Swiss-Prot
Match: AGO1B_ORYSJ (Protein argonaute 1B OS=Oryza sativa subsp. japonica GN=AGO1B PE=2 SV=3) HSP 1 Score: 353.214 bits (905), Expect = 7.994e-97 Identity = 167/204 (81.86%), Postives = 178/204 (87.25%), Query Frame = 1 Query: 1 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSTDGSGHTS------TKSTRAVGESGVRPLPALKENVKRVMFYC 594 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTF++VQKRHHTRLFANNH D+ + DRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEP+ ++GS TS +S R G VRPLPALKENVKRVMFYC Sbjct: 915 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARVAGNVAVRPLPALKENVKRVMFYC 1118
BLAST of FC921414 vs. ExPASy Swiss-Prot
Match: AGO1A_ORYSJ (Protein argonaute 1A OS=Oryza sativa subsp. japonica GN=AGO1A PE=2 SV=1) HSP 1 Score: 352.058 bits (902), Expect = 1.781e-96 Identity = 165/205 (80.49%), Postives = 178/205 (86.83%), Query Frame = 1 Query: 1 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSTDGSGHT-------STKSTRAVGESGVRPLPALKENVKRVMFYC 594 RDGVSEGQFYQVL YELDAIRKACASLE +YQPPVTF++VQKRHHTRLFANNH+D+ + DRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN FTADG+Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEPD ++GS HT +ST+ G VRPLP LKENVKRVMFYC Sbjct: 878 RDGVSEGQFYQVLFYELDAIRKACASLEADYQPPVTFVVVQKRHHTRLFANNHKDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASGAHTRGGGPLPGARSTKPAGNVAVRPLPDLKENVKRVMFYC 1082
BLAST of FC921414 vs. ExPASy Swiss-Prot
Match: AGO1_ARATH (Protein argonaute OS=Arabidopsis thaliana GN=AGO1 PE=1 SV=1) HSP 1 Score: 349.362 bits (895), Expect = 1.154e-95 Identity = 170/204 (83.33%), Postives = 180/204 (88.24%), Query Frame = 1 Query: 1 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGS-TDGS----GHTSTKSTRAVG-ESGVRPLPALKENVKRVMFYC 594 RDGVSEGQFYQVLLYELDAIRKACASLE YQPPVTF++VQKRHHTRLFA NH DR S DRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADG+QSLTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEP+ ++GS GS G + +STR + VRPLPALKENVKRVMFYC Sbjct: 845 RDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQKRHHTRLFAQNHNDRHSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGSMARGGGMAGRSTRGPNVNAAVRPLPALKENVKRVMFYC 1048
BLAST of FC921414 vs. ExPASy Swiss-Prot
Match: AGO1D_ORYSJ (Protein argonaute 1D OS=Oryza sativa subsp. japonica GN=AGO1D PE=2 SV=1) HSP 1 Score: 346.28 bits (887), Expect = 9.772e-95 Identity = 163/201 (81.09%), Postives = 181/201 (90.05%), Query Frame = 1 Query: 1 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGST---DGSGHTSTKSTRAVGESGVRPLPALKENVKRVMFYC 594 RDGVSEGQFYQVLL+ELDAIRKACASLE NYQP VTFI+VQKRHHTRLFA+NH D++S DRSGNILPGTVVDSKICHPTEFDF+LCSHAGI+GTSRPAHYHVLWDENNFTAD +Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYME D ++GS G G ++++STRA G VRPLPALK++VK VMFYC Sbjct: 838 RDGVSEGQFYQVLLHELDAIRKACASLEANYQPQVTFIVVQKRHHTRLFAHNHNDQNSVDRSGNILPGTVVDSKICHPTEFDFFLCSHAGIKGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMESDSSDSGSMASGRGGGSSTSRSTRAAGGGAVRPLPALKDSVKNVMFYC 1038
BLAST of FC921414 vs. ExPASy Swiss-Prot
Match: AGO1C_ORYSJ (Protein argonaute 1C OS=Oryza sativa subsp. japonica GN=AGO1C PE=2 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 1.411e-93 Identity = 165/205 (80.49%), Postives = 180/205 (87.80%), Query Frame = 1 Query: 1 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGS-TDGSG------HTSTKSTRAVGESGVRPLPALKENVKRVMFYC 594 RDGVSEGQFYQVLLYEL+AIRKACASLE NYQP VTFI+VQKRHHTRLFA+NH D++S DRSGNILPGTVVDSKICHPTEFDFYLCSHAGI+GTSRPAHYHVLWDENNFTAD +Q LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEPD ++ S G G +ST TRA G + V+PLPALK++VKRVMFYC Sbjct: 807 RDGVSEGQFYQVLLYELNAIRKACASLETNYQPKVTFIVVQKRHHTRLFAHNHNDQNSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIKGTSRPAHYHVLWDENNFTADALQILTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSSSVVSGPGVRGPLSGSSTSRTRAPGGAAVKPLPALKDSVKRVMFYC 1011
BLAST of FC921414 vs. ExPASy Swiss-Prot
Match: MEL1_ORYSJ (Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 2.497e-82 Identity = 147/198 (74.24%), Postives = 164/198 (82.83%), Query Frame = 1 Query: 1 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSTDGSGHTSTKSTRAVGESGVRPLPALKENVKRVMFYC 594 RDGVSEGQF VLL+E+DAIRKACASLE Y PPVTF++VQKRHHTRLF H R TD+SGNILPGTVVD +ICHPTEFDFYLCSHAGIQGTSRP HYHVL+DEN+FTAD +QSLTNNLCYTYARCTR+VSVVPPAYYAHLAAFRAR+Y+E + + GST GS S ++ G VR LP +KENVK VMFYC Sbjct: 864 RDGVSEGQFSHVLLHEMDAIRKACASLEEGYLPPVTFVVVQKRHHTRLFPEVHGRRDMTDKSGNILPGTVVDRQICHPTEFDFYLCSHAGIQGTSRPTHYHVLYDENHFTADALQSLTNNLCYTYARCTRAVSVVPPAYYAHLAAFRARYYVEGESSDGGSTPGS---SGQAVAREGPVEVRQLPKIKENVKDVMFYC 1058
BLAST of FC921414 vs. ExPASy Swiss-Prot
Match: AGOL_ARATH (Argonaute-like protein At2g27880 OS=Arabidopsis thaliana GN=At2g27880 PE=2 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 1.675e-78 Identity = 143/198 (72.22%), Postives = 161/198 (81.31%), Query Frame = 1 Query: 1 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSTDGSGHTSTKSTRAVGESGVRPLPALKENVKRVMFYC 594 RDGVSEGQF QVLL+E+ AIRKAC SL+ NY P VTF+IVQKRHHTRLF H +R TD+SGNI PGTVVD+KICHP EFDFYL SHAGIQGTSRPAHYHVL DEN FTAD +Q LTNNLCYTYARCT+SVS+VPPAYYAHLAAFRAR+YME +M + GS+ S ST VG+ + LPA+K+NVK VMFYC Sbjct: 806 RDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKRHHTRLFPEQHGNRDMTDKSGNIQPGTVVDTKICHPNEFDFYLNSHAGIQGTSRPAHYHVLLDENGFTADQLQMLTNNLCYTYARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSS-----RSRSSTTGVGQV-ISQLPAIKDNVKEVMFYC 997
BLAST of FC921414 vs. ExPASy Swiss-Prot
Match: AGO12_ORYSJ (Protein argonaute 12 OS=Oryza sativa subsp. japonica GN=AGO12 PE=2 SV=2) HSP 1 Score: 283.493 bits (724), Expect = 7.779e-76 Identity = 137/198 (69.19%), Postives = 159/198 (80.30%), Query Frame = 1 Query: 1 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSTDGSGHTSTKSTRAVGESGVRPLPALKENVKRVMFYC 594 RDG+SEGQF QVLLYE+DAIRKACASL+ Y PPVTF++VQKRHHTRLF N RD DRSGNILPGTVVD+ ICHP+EFDFYLCSH+GI+GTSRP HYHVL DEN F AD +Q+LT NL YTYARCTR+VS+VPPAYYAHL AFRAR+YME + + GS S +T++ R+ +PLP +KENVKR MFYC Sbjct: 862 RDGISEGQFSQVLLYEMDAIRKACASLQEGYLPPVTFVVVQKRHHTRLFPENRRDMM--DRSGNILPGTVVDTMICHPSEFDFYLCSHSGIKGTSRPTHYHVLLDENGFKADTLQTLTYNLSYTYARCTRAVSIVPPAYYAHLGAFRARYYMEDEHSDQGS---SSSVTTRTDRS-----TKPLPEIKENVKRFMFYC 1049 The following BLAST results are available for this feature:
BLAST of FC921414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921414 ID=FC921414; Name=FC921414; organism=Citrus clementina; type=EST; length=719bpback to top |